RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 COL4A2P08572 1712 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 FAM92AA1XBS5 289 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 CYP26A1O43174 497 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 GFRA3O60609 400 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 GNA14O95837 355 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 TBX18O95935 607 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 CALCAP01258 141 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 ZDHHC11BP0C7U3 371 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 IRF1P10914 325 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 CD19P15391 556 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 PFKLP17858 780 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 GJA4P35212 333 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 EML3Q32P44 896 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 FSTL4Q6MZW2 842 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 FOXR2Q6PJQ5 311 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 ASCL5Q7RTU5 278 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 ARHGEF19Q8IW93 802 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 TRIM59Q8IWR1 403 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 PPM1KQ8N3J5 372 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 CPA6Q8N4T0 437 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 TTC39CQ8N584 583 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 EHBP1Q8NDI1 1231 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 LMO3Q8TAP4 145 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 UBA3Q8TBC4 463 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 NT5C1BQ96P26 610 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 NACA2Q9H009 215 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 CHRDQ9H2X0 955 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 FBXO44Q9H4M3 255 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 NMUR1Q9HB89 426 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 OSER1Q9NX31 292 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 NUDT5Q9UKK9 219 aa12.19□□□□□ -0.46
CDHR3-205ENST00000468143 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.19□□□□□ -0.46
CDHR3-205ENST00000468143 NUP210Q8TEM1 1887 aaPredicted RBP12.19□□□□□ -0.46
CDHR3-205ENST00000468143 A0A1W2PQH9 124 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 PROB1E7EW31 1015 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 RNF225M0QZC1 329 aaPredicted RBP12.18□□□□□ -0.46
CDHR3-205ENST00000468143 TULP2O00295 520 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 TLR5O60602 858 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 FGFR1OPO95684 399 aaKnown RBP12.18□□□□□ -0.46
CDHR3-205ENST00000468143 AFPP02771 609 aaKnown RBP12.18□□□□□ -0.46
CDHR3-205ENST00000468143 CCDC192P0DO97 292 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 TCF3P15923 654 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 HOXC13P31276 330 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 SATB1Q01826 763 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 CETN1Q12798 172 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 GRSF1Q12849 480 aaKnown RBP eCLIP12.18□□□□□ -0.46
CDHR3-205ENST00000468143 LRRC32Q14392 662 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 GOLGA7BQ2TAP0 167 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 DGKKQ5KSL6 1271 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 SNX30Q5VWJ9 437 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 ARHGAP17Q68EM7 881 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 C1orf228Q6PIY5 440 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 TMEM270Q6UE05 265 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 CLEC17AQ6ZS10 378 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 ADGRG2Q8IZP9 1017 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 UBR7Q8N806 425 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 MLKLQ8NB16 471 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 ATP2A3Q93084 1043 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 NKD2Q969F2 451 aaPredicted RBP12.18□□□□□ -0.46
CDHR3-205ENST00000468143 WBP2Q969T9 261 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 ZFRQ96KR1 1074 aaKnown RBP12.18□□□□□ -0.46
CDHR3-205ENST00000468143 NUP62CLQ9H1M0 184 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 TLR8Q9NR97 1041 aaKnown RBP12.18□□□□□ -0.46
CDHR3-205ENST00000468143 C2orf42Q9NWW7 574 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 FBXO4Q9UKT5 387 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 SCML2Q9UQR0 700 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 PCDHB4Q9Y5E5 795 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 MUC6Q6W4X9 2439 aa12.18□□□□□ -0.46
CDHR3-205ENST00000468143 TRDMT1O14717 391 aaKnown RBP12.17□□□□□ -0.46
CDHR3-205ENST00000468143 MDM4O15151 490 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 PMM2O15305 246 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 P4HA2O15460 535 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 EGFP01133 1207 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 RARGP13631 454 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 TBXAS1P24557 533 aaPredicted RBP12.17□□□□□ -0.46
CDHR3-205ENST00000468143 CXCL12P48061 93 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 KIF11P52732 1056 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 MARSP56192 900 aaKnown RBP12.17□□□□□ -0.46
CDHR3-205ENST00000468143 YWHAEP62258 255 aaKnown RBP12.17□□□□□ -0.46
CDHR3-205ENST00000468143 AMPD2Q01433 879 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 PDE4CQ08493 712 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 NR1H3Q13133 447 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 CCINQ13939 588 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 TPD52L1Q16890 204 aaPredicted RBP12.17□□□□□ -0.46
CDHR3-205ENST00000468143 DPCR1Q3MIW9 517 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 SGO2Q562F6 1265 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 TMEM196Q5HYL7 178 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 PKN3Q6P5Z2 889 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 SCD5Q86SK9 330 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 PIGZQ86VD9 579 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 TTC30AQ86WT1 665 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 ANKRD52Q8NB46 1076 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 TFAP2BQ92481 460 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 NDRG1Q92597 394 aaKnown RBP12.17□□□□□ -0.46
CDHR3-205ENST00000468143 CNOT6LQ96LI5 555 aaKnown RBP12.17□□□□□ -0.46
CDHR3-205ENST00000468143 P2RY13Q9BPV8 354 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 CRACR2AQ9BSW2 395 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 INTS2Q9H0H0 1204 aaKnown RBP12.17□□□□□ -0.46
CDHR3-205ENST00000468143 PNPLA8Q9NP80 782 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 POLR3BQ9NW08 1133 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms