RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 CCINQ13939 588 aa19.2■□□□□ 0.66
CGREF1-208ENST00000467539 GAS6Q14393 721 aa19.2■□□□□ 0.66
CGREF1-208ENST00000467539 TMEM196Q5HYL7 178 aa19.2■□□□□ 0.66
CGREF1-208ENST00000467539 HECTD3Q5T447 861 aa19.2■□□□□ 0.66
CGREF1-208ENST00000467539 PPP1R26Q5T8A7 1209 aaPredicted RBP19.2■□□□□ 0.66
CGREF1-208ENST00000467539 ZC3H14Q6PJT7 736 aaKnown RBP19.2■□□□□ 0.66
CGREF1-208ENST00000467539 CLEC20AQ6ZU45 233 aa19.2■□□□□ 0.66
CGREF1-208ENST00000467539 ADGRG2Q8IZP9 1017 aa19.2■□□□□ 0.66
CGREF1-208ENST00000467539 SPEM1Q8N4L4 309 aa19.2■□□□□ 0.66
CGREF1-208ENST00000467539 CPA6Q8N4T0 437 aa19.2■□□□□ 0.66
CGREF1-208ENST00000467539 ATP2A3Q93084 1043 aa19.2■□□□□ 0.66
CGREF1-208ENST00000467539 CHFRQ96EP1 664 aa19.2■□□□□ 0.66
CGREF1-208ENST00000467539 TMEM176AQ96HP8 235 aa19.2■□□□□ 0.66
CGREF1-208ENST00000467539 DUSP16Q9BY84 665 aa19.2■□□□□ 0.66
CGREF1-208ENST00000467539 FAM126AQ9BYI3 521 aaPredicted RBP19.2■□□□□ 0.66
CGREF1-208ENST00000467539 PNPLA8Q9NP80 782 aa19.2■□□□□ 0.66
CGREF1-208ENST00000467539 PRMT8Q9NR22 394 aaPredicted RBP19.2■□□□□ 0.66
CGREF1-208ENST00000467539 CPQQ9Y646 472 aa19.2■□□□□ 0.66
CGREF1-208ENST00000467539 R4GN57 208 aa19.2■□□□□ 0.66
CGREF1-208ENST00000467539 GJA4P35212 333 aa19.19■□□□□ 0.66
CGREF1-208ENST00000467539 ANP32AP39687 249 aaKnown RBP19.19■□□□□ 0.66
CGREF1-208ENST00000467539 CXCL12P48061 93 aa19.19■□□□□ 0.66
CGREF1-208ENST00000467539 FMO5P49326 533 aa19.19■□□□□ 0.66
CGREF1-208ENST00000467539 TUBP50607 506 aa19.19■□□□□ 0.66
CGREF1-208ENST00000467539 GALK1P51570 392 aa19.19■□□□□ 0.66
CGREF1-208ENST00000467539 RAD23BP54727 409 aa19.19■□□□□ 0.66
CGREF1-208ENST00000467539 CCDC40Q4G0X9 1142 aa19.19■□□□□ 0.66
CGREF1-208ENST00000467539 ZNF394Q53GI3 561 aa19.19■□□□□ 0.66
CGREF1-208ENST00000467539 SLC4A11Q8NBS3 891 aa19.19■□□□□ 0.66
CGREF1-208ENST00000467539 TTC16Q8NEE8 873 aa19.19■□□□□ 0.66
CGREF1-208ENST00000467539 UBXN6Q9BZV1 441 aa19.19■□□□□ 0.66
CGREF1-208ENST00000467539 RBM12Q9NTZ6 932 aaKnown RBP19.19■□□□□ 0.66
CGREF1-208ENST00000467539 SCML2Q9UQR0 700 aa19.19■□□□□ 0.66
CGREF1-208ENST00000467539 WNT6Q9Y6F9 365 aa19.19■□□□□ 0.66
CGREF1-208ENST00000467539 P4HA2O15460 535 aa19.18■□□□□ 0.66
CGREF1-208ENST00000467539 COCHO43405 550 aa19.18■□□□□ 0.66
CGREF1-208ENST00000467539 GNA14O95837 355 aa19.18■□□□□ 0.66
CGREF1-208ENST00000467539 CCR3P51677 355 aa19.18■□□□□ 0.66
CGREF1-208ENST00000467539 NRLP54845 237 aa19.18■□□□□ 0.66
CGREF1-208ENST00000467539 GRSF1Q12849 480 aaKnown RBP eCLIP19.18■□□□□ 0.66
CGREF1-208ENST00000467539 PAK1Q13153 545 aa19.18■□□□□ 0.66
CGREF1-208ENST00000467539 CUL2Q13617 745 aa19.18■□□□□ 0.66
CGREF1-208ENST00000467539 PPP2R5DQ14738 602 aa19.18■□□□□ 0.66
CGREF1-208ENST00000467539 CAMK4Q16566 473 aa19.18■□□□□ 0.66
CGREF1-208ENST00000467539 DDX42Q86XP3 938 aaKnown RBP eCLIP19.18■□□□□ 0.66
CGREF1-208ENST00000467539 ZBTB44Q8NCP5 570 aa19.18■□□□□ 0.66
CGREF1-208ENST00000467539 EXOC4Q96A65 974 aa19.18■□□□□ 0.66
CGREF1-208ENST00000467539 ARID3AQ99856 593 aa19.18■□□□□ 0.66
CGREF1-208ENST00000467539 SRRTQ9BXP5 876 aaKnown RBP19.18■□□□□ 0.66
CGREF1-208ENST00000467539 FBRSL1Q9HCM7 1045 aaKnown RBP19.18■□□□□ 0.66
CGREF1-208ENST00000467539 ZSCAN32Q9NX65 697 aa19.18■□□□□ 0.66
CGREF1-208ENST00000467539 GMIPQ9P107 970 aa19.18■□□□□ 0.66
CGREF1-208ENST00000467539 PCDHGA2Q9Y5H1 932 aa19.18■□□□□ 0.66
CGREF1-208ENST00000467539 VPS13AQ96RL7 3174 aa19.17■□□□□ 0.66
CGREF1-208ENST00000467539 SLC9A3R1O14745 358 aaPredicted RBP19.17■□□□□ 0.66
CGREF1-208ENST00000467539 LMNAP02545 664 aaKnown RBP19.17■□□□□ 0.66
CGREF1-208ENST00000467539 MBL2P11226 248 aaPredicted RBP19.17■□□□□ 0.66
CGREF1-208ENST00000467539 TDGF1P13385 188 aa19.17■□□□□ 0.66
CGREF1-208ENST00000467539 KIF11P52732 1056 aa19.17■□□□□ 0.66
CGREF1-208ENST00000467539 MARSP56192 900 aaKnown RBP19.17■□□□□ 0.66
CGREF1-208ENST00000467539 STX17P56962 302 aa19.17■□□□□ 0.66
CGREF1-208ENST00000467539 ARHGAP17Q68EM7 881 aa19.17■□□□□ 0.66
CGREF1-208ENST00000467539 FSTL4Q6MZW2 842 aa19.17■□□□□ 0.66
CGREF1-208ENST00000467539 TSSK4Q6SA08 328 aa19.17■□□□□ 0.66
CGREF1-208ENST00000467539 CLEC17AQ6ZS10 378 aa19.17■□□□□ 0.66
CGREF1-208ENST00000467539 ATRIPQ8WXE1 791 aa19.17■□□□□ 0.66
CGREF1-208ENST00000467539 TLR8Q9NR97 1041 aaKnown RBP19.17■□□□□ 0.66
CGREF1-208ENST00000467539 CTNND2Q9UQB3 1225 aa19.17■□□□□ 0.66
CGREF1-208ENST00000467539 RIF1Q5UIP0 2472 aaKnown RBP19.17■□□□□ 0.66
CGREF1-208ENST00000467539 PTPRZ1P23471 2315 aaPredicted RBP19.17■□□□□ 0.66
CGREF1-208ENST00000467539 KIF26AQ9ULI4 1882 aaPredicted RBP19.16■□□□□ 0.66
CGREF1-208ENST00000467539 E2F8A0AVK6 867 aa19.16■□□□□ 0.66
CGREF1-208ENST00000467539 PAPSS2O95340 614 aaPredicted RBP19.16■□□□□ 0.66
CGREF1-208ENST00000467539 NFATC1O95644 943 aa19.16■□□□□ 0.66
CGREF1-208ENST00000467539 FGFR1OPO95684 399 aaKnown RBP19.16■□□□□ 0.66
CGREF1-208ENST00000467539 ACO1P21399 889 aaKnown RBP19.16■□□□□ 0.66
CGREF1-208ENST00000467539 DRD1P21728 446 aa19.16■□□□□ 0.66
CGREF1-208ENST00000467539 TBXAS1P24557 533 aaPredicted RBP19.16■□□□□ 0.66
CGREF1-208ENST00000467539 PGFP49763 221 aa19.16■□□□□ 0.66
CGREF1-208ENST00000467539 YWHAEP62258 255 aaKnown RBP19.16■□□□□ 0.66
CGREF1-208ENST00000467539 CETN1Q12798 172 aa19.16■□□□□ 0.66
CGREF1-208ENST00000467539 GPRIN1Q7Z2K8 1008 aa19.16■□□□□ 0.66
CGREF1-208ENST00000467539 TRIM59Q8IWR1 403 aa19.16■□□□□ 0.66
CGREF1-208ENST00000467539 ZNF276Q8N554 614 aa19.16■□□□□ 0.66
CGREF1-208ENST00000467539 ANKRD52Q8NB46 1076 aa19.16■□□□□ 0.66
CGREF1-208ENST00000467539 LMO3Q8TAP4 145 aa19.16■□□□□ 0.66
CGREF1-208ENST00000467539 ZFRQ96KR1 1074 aaKnown RBP19.16■□□□□ 0.66
CGREF1-208ENST00000467539 P2RY13Q9BPV8 354 aa19.16■□□□□ 0.66
CGREF1-208ENST00000467539 CCSER2Q9H7U1 834 aa19.16■□□□□ 0.66
CGREF1-208ENST00000467539 SMPD4Q9NXE4 827 aa19.16■□□□□ 0.66
CGREF1-208ENST00000467539 CFAP97Q9P2B7 532 aa19.16■□□□□ 0.66
CGREF1-208ENST00000467539 TBC1D14Q9P2M4 693 aa19.16■□□□□ 0.66
CGREF1-208ENST00000467539 KIAA1257Q9ULG3 409 aa19.16■□□□□ 0.66
CGREF1-208ENST00000467539 USP3Q9Y6I4 520 aa19.16■□□□□ 0.66
CGREF1-208ENST00000467539 LILRB5O75023 590 aa19.15■□□□□ 0.66
CGREF1-208ENST00000467539 SATB1Q01826 763 aa19.15■□□□□ 0.66
CGREF1-208ENST00000467539 KCNH2Q12809 1159 aa19.15■□□□□ 0.66
CGREF1-208ENST00000467539 LRMPQ12912 555 aa19.15■□□□□ 0.66
CGREF1-208ENST00000467539 Q6ZS52 159 aa19.15■□□□□ 0.66
CGREF1-208ENST00000467539 UBR7Q8N806 425 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms