RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 PDCLQ13371 301 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 TUBB3Q13509 450 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 SLC12A1Q13621 1099 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 DYRK1AQ13627 763 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 ATP1A4Q13733 1029 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 RRP1BQ14684 758 aaKnown RBP4.73□□□□□ -1.65
VPS13A-209ENST00000467124 RPS6KA2Q15349 733 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 DLGAP5Q15398 846 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 FBXO47Q5MNV8 452 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 ATPAF1Q5TC12 328 aaPredicted RBP4.73□□□□□ -1.65
VPS13A-209ENST00000467124 SLC9A4Q6AI14 798 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 SYT13Q7L8C5 426 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 LRRTM4Q86VH4 590 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 TMEM132CQ8N3T6 1108 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 METTL25Q8N6Q8 603 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 PPHLN1Q8NEY8 458 aaKnown RBP4.73□□□□□ -1.65
VPS13A-209ENST00000467124 CEP70Q8NHQ1 597 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 SLC30A5Q8TAD4 765 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 MAELQ96JY0 434 aaKnown RBP4.73□□□□□ -1.65
VPS13A-209ENST00000467124 FAM227BQ96M60 508 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 ADOQ96SZ5 270 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 C17orf80Q9BSJ5 609 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 MECRQ9BV79 373 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 SLC26A6Q9BXS9 759 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 ACTRT3Q9BYD9 372 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 ALOXE3Q9BYJ1 711 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 TPSD1Q9BZJ3 242 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 FAM83DQ9H4H8 585 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 CHODLQ9H9P2 273 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 CD248Q9HCU0 757 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 SAYSD1Q9NPB0 183 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 PRDM8Q9NQV8 689 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 KCNE5Q9UJ90 142 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 KCND3Q9UK17 655 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 USP22Q9UPT9 525 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 CHST2Q9Y4C5 530 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 XDHP47989 1333 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 MYADML2A6NDP7 307 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 RPP40O75818 363 aaKnown RBP4.72□□□□□ -1.65
VPS13A-209ENST00000467124 NTSR2O95665 410 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 CER1O95813 267 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 CD4P01730 458 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 DRD1P21728 446 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 CST5P28325 142 aaPredicted RBP4.72□□□□□ -1.65
VPS13A-209ENST00000467124 AARSP49588 968 aaKnown RBP eCLIP4.72□□□□□ -1.65
VPS13A-209ENST00000467124 GATMP50440 423 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 CLCN2P51788 898 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 HNRNPMP52272 730 aaKnown RBP eCLIP4.72□□□□□ -1.65
VPS13A-209ENST00000467124 RPS7P62081 194 aaKnown RBP4.72□□□□□ -1.65
VPS13A-209ENST00000467124 JAG1P78504 1218 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 DDX10Q13206 875 aaKnown RBP4.72□□□□□ -1.65
VPS13A-209ENST00000467124 TBX2Q13207 712 aaPredicted RBP4.72□□□□□ -1.65
VPS13A-209ENST00000467124 ICAM4Q14773 271 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 NFIXQ14938 502 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 CYP2A13Q16696 494 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 KRTAP5-3Q6L8H2 238 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 ZNF585AQ6P3V2 769 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 MZT2AQ6P582 158 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 CLEC4GQ6UXB4 293 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 DPY19L3Q6ZPD9 716 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 TMPRSS9Q7Z410 1059 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 HERC6Q8IVU3 1022 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 IL17REQ8NFR9 667 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 CXorf38Q8TB03 319 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 ATG4AQ8WYN0 398 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 SKA1Q96BD8 255 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 SEC62Q99442 399 aaKnown RBP4.72□□□□□ -1.65
VPS13A-209ENST00000467124 TRIM5Q9C035 493 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 VPS16Q9H269 839 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 TP63Q9H3D4 680 aaPredicted RBP4.72□□□□□ -1.65
VPS13A-209ENST00000467124 PDP2Q9P2J9 529 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 VPS51Q9UID3 782 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 ST6GALNAC2Q9UJ37 374 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 FBXO9Q9UK97 447 aaPredicted RBP4.72□□□□□ -1.65
VPS13A-209ENST00000467124 RIMKLBQ9ULI2 386 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 SLC27A6Q9Y2P4 619 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 PCDHB7Q9Y5E2 793 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 NOX1Q9Y5S8 564 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 FPGT-TNNI3KV9GXZ4 949 aa4.72□□□□□ -1.65
VPS13A-209ENST00000467124 TRGV11A0A075B6L2 103 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 A0A1B0GVC2 190 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 A0A1W2PS29 197 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 FAM90A18PA6NE21 464 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 FAM90A16PA6NEW6 464 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 A6NLC8 198 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 MARCH11A6NNE9 402 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 FAM90A9PA6NNJ1 464 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 GRXCR1A8MXD5 290 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 FAM90A5PA8MXJ8 464 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 E7EVH7 732 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 M0QYT0 321 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 SNX2O60749 519 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 FAM155BO75949 473 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 MBD4O95243 580 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 GLP2RO95838 553 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 HLA-DOAP06340 250 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 RHOP08100 348 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 FAM90A15PP0C7V4 464 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 FAM90A14PP0C7W9 464 aa4.71□□□□□ -1.66
VPS13A-209ENST00000467124 PPP3CBP16298 524 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms