RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 PQBP1O60828 265 aaKnown RBP5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 KRT18P05783 430 aaKnown RBP5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 CYP2C9P11712 490 aa5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 BRAFP15056 766 aa5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 TSHRP16473 764 aa5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 RPS16P62249 146 aaKnown RBP5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 LAMB3Q13751 1172 aa5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 AMOTQ4VCS5 1084 aa5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 KSR2Q6VAB6 950 aa5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 C11orf96Q7Z7L8 435 aa5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 GLG1Q92896 1179 aa5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 STRBPQ96SI9 672 aaKnown RBP5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 GDF15Q99988 308 aa5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 TMEM79Q9BSE2 394 aa5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 SPRTNQ9H040 489 aaPredicted RBP5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 VPS16Q9H269 839 aa5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 GLOD4Q9HC38 313 aa5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 A1CFQ9NQ94 594 aaKnown RBP5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 ELOVL5Q9NYP7 299 aa5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 CAPN11Q9UMQ6 739 aa5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 FAM50BQ9Y247 325 aa5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 PAXBP1Q9Y5B6 917 aa5.42□□□□□ -1.54
PRPF40A-205ENST00000467114 PYCARD-AS1I3L0S3 204 aa5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 TBC1D4O60343 1298 aa5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 CSF1RP07333 972 aa5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 HOXB6P17509 224 aaKnown RBP5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 NR4A2P43354 598 aa5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 MMP13P45452 471 aa5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 PRIM2P49643 509 aa5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 CCT4P50991 539 aaKnown RBP5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 PDE1AP54750 535 aa5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 FOXG1P55316 489 aaPredicted RBP5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 E2F2Q14209 437 aa5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 NPY5RQ15761 445 aa5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 RGS7BPQ6MZT1 257 aaPredicted RBP5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 MTHFD1LQ6UB35 978 aa5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 Q6ZWC4 215 aa5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 KRT73Q86Y46 540 aa5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 RITA1Q96K30 269 aa5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 C5orf34Q96MH7 638 aa5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 MOGAT1Q96PD6 335 aa5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 THAP7Q9BT49 309 aaPredicted RBP5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 COLEC11Q9BWP8 271 aa5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 PCGF6Q9BYE7 350 aa5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 CHST8Q9H2A9 424 aa5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 ZNF287Q9HBT7 754 aa5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 FNIP2Q9P278 1114 aa5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 NDRG4Q9ULP0 352 aaKnown RBP5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 PHTF1Q9UMS5 762 aa5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 GABRQQ9UN88 632 aa5.41□□□□□ -1.54
PRPF40A-205ENST00000467114 KCNU1A8MYU2 1149 aa5.4□□□□□ -1.54
PRPF40A-205ENST00000467114 FOXN3O00409 490 aaPredicted RBP5.4□□□□□ -1.54
PRPF40A-205ENST00000467114 NTN1O95631 604 aa5.4□□□□□ -1.54
PRPF40A-205ENST00000467114 KLRC1P26715 233 aa5.4□□□□□ -1.54
PRPF40A-205ENST00000467114 RAB32Q13637 225 aa5.4□□□□□ -1.54
PRPF40A-205ENST00000467114 DAG1Q14118 895 aa5.4□□□□□ -1.54
PRPF40A-205ENST00000467114 TRIP6Q15654 476 aaKnown RBP5.4□□□□□ -1.54
PRPF40A-205ENST00000467114 TBC1D25Q3MII6 688 aa5.4□□□□□ -1.54
PRPF40A-205ENST00000467114 FCRL6Q6DN72 434 aa5.4□□□□□ -1.54
PRPF40A-205ENST00000467114 AWAT2Q6E213 333 aa5.4□□□□□ -1.54
PRPF40A-205ENST00000467114 IL31Q6EBC2 164 aa5.4□□□□□ -1.54
PRPF40A-205ENST00000467114 KIRREL2Q6UWL6 708 aa5.4□□□□□ -1.54
PRPF40A-205ENST00000467114 NOL8Q76FK4 1167 aaKnown RBP5.4□□□□□ -1.54
PRPF40A-205ENST00000467114 TECPR1Q7Z6L1 1165 aa5.4□□□□□ -1.54
PRPF40A-205ENST00000467114 CCDC146Q8IYE0 955 aa5.4□□□□□ -1.54
PRPF40A-205ENST00000467114 R3HDM4Q96D70 268 aa5.4□□□□□ -1.54
PRPF40A-205ENST00000467114 DAZAP1Q96EP5 407 aaKnown RBP5.4□□□□□ -1.54
PRPF40A-205ENST00000467114 SACM1LQ9NTJ5 587 aa5.4□□□□□ -1.54
PRPF40A-205ENST00000467114 DNMT3BQ9UBC3 853 aaKnown RBP5.4□□□□□ -1.54
PRPF40A-205ENST00000467114 OGDHLQ9ULD0 1010 aa5.4□□□□□ -1.54
PRPF40A-205ENST00000467114 A0A087WZ62 844 aa5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 POC1B-GALNT4F8VUJ3 575 aa5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 BCAR3O75815 825 aa5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 MAP4K4O95819 1239 aaPredicted RBP5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 MT-ND5P03915 603 aa5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 TXNP10599 105 aaKnown RBP5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 XRCC6P12956 609 aaKnown RBP eCLIP5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 KCNA3P22001 575 aa5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 ARHGAP25P42331 645 aa5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 NEK3P51956 506 aa5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 DGKEP52429 567 aa5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 TPTEP56180 551 aa5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 MYO1EQ12965 1108 aa5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 GALNT4Q8N4A0 578 aa5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 ABHD11Q8NFV4 315 aa5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 SOCS4Q8WXH5 440 aa5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 HMCESQ96FZ2 354 aa5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 CCDC136Q96JN2 1154 aa5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 TBCBQ99426 244 aa5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 WACQ9BTA9 647 aa5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 BRIP1Q9BX63 1249 aa5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 MS4A7Q9GZW8 240 aaPredicted RBP5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 DHX36Q9H2U1 1008 aaKnown RBP5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 CXorf36Q9H7Y0 433 aa5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 PDGFCQ9NRA1 345 aa5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 SHOC2Q9UQ13 582 aa5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 WDR17Q8IZU2 1322 aa5.39□□□□□ -1.55
PRPF40A-205ENST00000467114 A0A1W2PPC4 97 aa5.38□□□□□ -1.55
PRPF40A-205ENST00000467114 RHPN2P1A8MT19 583 aa5.38□□□□□ -1.55
PRPF40A-205ENST00000467114 E5RJQ4 531 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms