RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 PCDHA3Q9Y5H8 950 aa4.76□□□□□ -1.65
XRN1-206ENST00000467077 TNFRSF13BO14836 293 aaPredicted RBP4.75□□□□□ -1.65
XRN1-206ENST00000467077 XPOTO43592 962 aaKnown RBP4.75□□□□□ -1.65
XRN1-206ENST00000467077 IL6STP40189 918 aaPredicted RBP4.75□□□□□ -1.65
XRN1-206ENST00000467077 HSF1Q00613 529 aa4.75□□□□□ -1.65
XRN1-206ENST00000467077 PSG6Q00889 435 aa4.75□□□□□ -1.65
XRN1-206ENST00000467077 NFATC4Q14934 902 aa4.75□□□□□ -1.65
XRN1-206ENST00000467077 SEC23BQ15437 767 aa4.75□□□□□ -1.65
XRN1-206ENST00000467077 RNF219Q5W0B1 726 aaPredicted RBP4.75□□□□□ -1.65
XRN1-206ENST00000467077 IZUMO1Q8IYV9 350 aa4.75□□□□□ -1.65
XRN1-206ENST00000467077 MED30Q96HR3 178 aa4.75□□□□□ -1.65
XRN1-206ENST00000467077 NTPCRQ9BSD7 190 aaKnown RBP4.75□□□□□ -1.65
XRN1-206ENST00000467077 FAM126AQ9BYI3 521 aaPredicted RBP4.75□□□□□ -1.65
XRN1-206ENST00000467077 MRPL46Q9H2W6 279 aaKnown RBP4.75□□□□□ -1.65
XRN1-206ENST00000467077 SNX15Q9NRS6 342 aa4.75□□□□□ -1.65
XRN1-206ENST00000467077 LAMC3Q9Y6N6 1575 aa4.74□□□□□ -1.65
XRN1-206ENST00000467077 HMGXB3Q12766 1538 aa4.74□□□□□ -1.65
XRN1-206ENST00000467077 hCG_1984214I3L0E3 225 aa4.74□□□□□ -1.65
XRN1-206ENST00000467077 ADORA2AP29274 412 aa4.74□□□□□ -1.65
XRN1-206ENST00000467077 VIPR2P41587 438 aa4.74□□□□□ -1.65
XRN1-206ENST00000467077 KCNJ4P48050 445 aa4.74□□□□□ -1.65
XRN1-206ENST00000467077 GAS1P54826 345 aa4.74□□□□□ -1.65
XRN1-206ENST00000467077 RPL36AP83881 106 aaKnown RBP4.74□□□□□ -1.65
XRN1-206ENST00000467077 LMAN2Q12907 356 aa4.74□□□□□ -1.65
XRN1-206ENST00000467077 STIM1Q13586 685 aa4.74□□□□□ -1.65
XRN1-206ENST00000467077 KCNB1Q14721 858 aa4.74□□□□□ -1.65
XRN1-206ENST00000467077 MLC1Q15049 377 aa4.74□□□□□ -1.65
XRN1-206ENST00000467077 THEMIS2Q5TEJ8 643 aa4.74□□□□□ -1.65
XRN1-206ENST00000467077 RSPRY1Q96DX4 576 aa4.74□□□□□ -1.65
XRN1-206ENST00000467077 ICAM5Q9UMF0 924 aa4.74□□□□□ -1.65
XRN1-206ENST00000467077 MRPS17Q9Y2R5 130 aaKnown RBP4.74□□□□□ -1.65
XRN1-206ENST00000467077 SMARCA4P51532 1647 aa4.74□□□□□ -1.65
XRN1-206ENST00000467077 ATAD2BQ9ULI0 1458 aa4.74□□□□□ -1.65
XRN1-206ENST00000467077 VNN1O95497 513 aa4.73□□□□□ -1.65
XRN1-206ENST00000467077 CSF1RP07333 972 aa4.73□□□□□ -1.65
XRN1-206ENST00000467077 GKP32189 559 aa4.73□□□□□ -1.65
XRN1-206ENST00000467077 RRP1P56182 461 aaKnown RBP4.73□□□□□ -1.65
XRN1-206ENST00000467077 B4GALNT1Q00973 533 aa4.73□□□□□ -1.65
XRN1-206ENST00000467077 ABRAQ8N0Z2 381 aa4.73□□□□□ -1.65
XRN1-206ENST00000467077 ATL2Q8NHH9 583 aa4.73□□□□□ -1.65
XRN1-206ENST00000467077 CXorf36Q9H7Y0 433 aa4.73□□□□□ -1.65
XRN1-206ENST00000467077 PLEKHM1Q9Y4G2 1056 aa4.73□□□□□ -1.65
XRN1-206ENST00000467077 BAZ1AQ9NRL2 1556 aaPredicted RBP4.73□□□□□ -1.65
XRN1-206ENST00000467077 KLHL33A6NCF5 533 aa4.72□□□□□ -1.65
XRN1-206ENST00000467077 CTIFO43310 598 aaKnown RBP4.72□□□□□ -1.65
XRN1-206ENST00000467077 UNC5CO95185 931 aa4.72□□□□□ -1.65
XRN1-206ENST00000467077 AHSGP02765 367 aa4.72□□□□□ -1.65
XRN1-206ENST00000467077 GRPP07492 148 aa4.72□□□□□ -1.65
XRN1-206ENST00000467077 APEHP13798 732 aaKnown RBP4.72□□□□□ -1.65
XRN1-206ENST00000467077 TACR3P29371 465 aa4.72□□□□□ -1.65
XRN1-206ENST00000467077 ALDH7A1P49419 539 aaKnown RBP4.72□□□□□ -1.65
XRN1-206ENST00000467077 YPEL5P62699 121 aa4.72□□□□□ -1.65
XRN1-206ENST00000467077 DSC2Q02487 901 aa4.72□□□□□ -1.65
XRN1-206ENST00000467077 KRT17Q04695 432 aa4.72□□□□□ -1.65
XRN1-206ENST00000467077 MYO1EQ12965 1108 aa4.72□□□□□ -1.65
XRN1-206ENST00000467077 RFX8Q6ZV50 586 aa4.72□□□□□ -1.65
XRN1-206ENST00000467077 PTCHD4Q6ZW05 846 aa4.72□□□□□ -1.65
XRN1-206ENST00000467077 HEATR3Q7Z4Q2 680 aa4.72□□□□□ -1.65
XRN1-206ENST00000467077 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.72□□□□□ -1.65
XRN1-206ENST00000467077 UBE2Q1Q7Z7E8 422 aa4.72□□□□□ -1.65
XRN1-206ENST00000467077 SPATA2LQ8IUW3 424 aaPredicted RBP4.72□□□□□ -1.65
XRN1-206ENST00000467077 MAFAQ8NHW3 353 aaPredicted RBP4.72□□□□□ -1.65
XRN1-206ENST00000467077 WFIKKN2Q8TEU8 576 aa4.72□□□□□ -1.65
XRN1-206ENST00000467077 NUDCD2Q8WVJ2 157 aa4.72□□□□□ -1.65
XRN1-206ENST00000467077 SPC25Q9HBM1 224 aa4.72□□□□□ -1.65
XRN1-206ENST00000467077 DECR2Q9NUI1 292 aa4.72□□□□□ -1.65
XRN1-206ENST00000467077 BAZ1BQ9UIG0 1483 aaKnown RBP4.71□□□□□ -1.66
XRN1-206ENST00000467077 SLC16A6O15403 523 aa4.71□□□□□ -1.66
XRN1-206ENST00000467077 ENTPD1P49961 510 aa4.71□□□□□ -1.66
XRN1-206ENST00000467077 PPATQ06203 517 aa4.71□□□□□ -1.66
XRN1-206ENST00000467077 EXOSC9Q06265 439 aaKnown RBP4.71□□□□□ -1.66
XRN1-206ENST00000467077 NOGQ13253 232 aa4.71□□□□□ -1.66
XRN1-206ENST00000467077 LY6KQ17RY6 165 aa4.71□□□□□ -1.66
XRN1-206ENST00000467077 IQCF1Q8N6M8 205 aa4.71□□□□□ -1.66
XRN1-206ENST00000467077 SNX14Q9Y5W7 946 aa4.71□□□□□ -1.66
XRN1-206ENST00000467077 CADPSQ9ULU8 1353 aa4.7□□□□□ -1.66
XRN1-206ENST00000467077 IARSP41252 1262 aaKnown RBP4.7□□□□□ -1.66
XRN1-206ENST00000467077 KRT71Q3SY84 523 aa4.7□□□□□ -1.66
XRN1-206ENST00000467077 PPP1R3BQ86XI6 285 aa4.7□□□□□ -1.66
XRN1-206ENST00000467077 DDX42Q86XP3 938 aaKnown RBP eCLIP4.7□□□□□ -1.66
XRN1-206ENST00000467077 C1orf162Q8NEQ5 155 aaPredicted RBP4.7□□□□□ -1.66
XRN1-206ENST00000467077 BRIX1Q8TDN6 353 aaKnown RBP4.7□□□□□ -1.66
XRN1-206ENST00000467077 MIB2Q96AX9 1013 aa4.7□□□□□ -1.66
XRN1-206ENST00000467077 SLITRK1Q96PX8 696 aa4.7□□□□□ -1.66
XRN1-206ENST00000467077 MYLK2Q9H1R3 596 aa4.7□□□□□ -1.66
XRN1-206ENST00000467077 MRFAP1Q9Y605 127 aa4.7□□□□□ -1.66
XRN1-206ENST00000467077 TTBK1Q5TCY1 1321 aaPredicted RBP4.7□□□□□ -1.66
XRN1-206ENST00000467077 PHLDB1Q86UU1 1377 aa4.69□□□□□ -1.66
XRN1-206ENST00000467077 M0R3H8 397 aa4.69□□□□□ -1.66
XRN1-206ENST00000467077 ZC3H11AO75152 810 aaKnown RBP eCLIP4.69□□□□□ -1.667e-6■■■■■ 33.7
XRN1-206ENST00000467077 PMPCBO75439 489 aa4.69□□□□□ -1.66
XRN1-206ENST00000467077 ZNF432O94892 652 aa4.69□□□□□ -1.66
XRN1-206ENST00000467077 MT-CO1P00395 513 aa4.69□□□□□ -1.66
XRN1-206ENST00000467077 CD63P08962 238 aa4.69□□□□□ -1.66
XRN1-206ENST00000467077 PRKAG1P54619 331 aa4.69□□□□□ -1.66
XRN1-206ENST00000467077 RNF187Q5TA31 235 aaPredicted RBP4.69□□□□□ -1.66
XRN1-206ENST00000467077 RAB11FIP4Q86YS3 637 aa4.69□□□□□ -1.66
XRN1-206ENST00000467077 TMEM199Q8N511 208 aa4.69□□□□□ -1.66
XRN1-206ENST00000467077 NEUROG1Q92886 237 aa4.69□□□□□ -1.66
XRN1-206ENST00000467077 PLSCR4Q9NRQ2 329 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms