RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 NFIAQ12857 509 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 CYP51A1Q16850 503 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 FUT11Q495W5 492 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 FEZF2Q8TBJ5 459 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 GFM2Q969S9 779 aaKnown RBP9.01□□□□□ -0.97
HPS4-209ENST00000466781 CENPTQ96BT3 561 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 TRIM51Q9BSJ1 452 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 ADAM33Q9BZ11 813 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 ARMC7Q9H6L4 198 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 ANKEF1Q9NU02 776 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 PLA2G4CQ9UP65 541 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 NCF1BA6NI72 391 aaPredicted RBP9.01□□□□□ -0.97
HPS4-209ENST00000466781 NCF1CA8MVU1 366 aaPredicted RBP9.01□□□□□ -0.97
HPS4-209ENST00000466781 NCF1P14598 390 aaPredicted RBP9.01□□□□□ -0.97
HPS4-209ENST00000466781 ITGALP20701 1170 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 DSG3P32926 999 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 DMTNQ08495 405 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 SLC18A3Q16572 532 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 VN1R5Q7Z5H4 357 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 SLC44A2Q8IWA5 706 aaPredicted RBP9.01□□□□□ -0.97
HPS4-209ENST00000466781 CD302Q8IX05 232 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 ADGRF2Q8IZF7 708 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 OSBPL6Q9BZF3 934 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 WDR41Q9HAD4 459 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 VPS28Q9UK41 221 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 PADI4Q9UM07 663 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 PCDHB2Q9Y5E7 798 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 DDTLA6NHG4 134 aaPredicted RBP9□□□□□ -0.97
HPS4-209ENST00000466781 CYB561D2O14569 222 aa9□□□□□ -0.97
HPS4-209ENST00000466781 GALCP54803 685 aa9□□□□□ -0.97
HPS4-209ENST00000466781 HERVK_113P62684 666 aa9□□□□□ -0.97
HPS4-209ENST00000466781 DACT2Q5SW24 774 aa9□□□□□ -0.97
HPS4-209ENST00000466781 PPIL6Q8IXY8 311 aa9□□□□□ -0.97
HPS4-209ENST00000466781 C4orf33Q8N1A6 199 aa9□□□□□ -0.97
HPS4-209ENST00000466781 KCTD10Q9H3F6 313 aa9□□□□□ -0.97
HPS4-209ENST00000466781 STAU2Q9NUL3 570 aaKnown RBP eCLIP9□□□□□ -0.97
HPS4-209ENST00000466781 TUBGCP4Q9UGJ1 667 aa9□□□□□ -0.97
HPS4-209ENST00000466781 TMCC3Q9ULS5 477 aa9□□□□□ -0.97
HPS4-209ENST00000466781 FGFR2P21802 821 aa9□□□□□ -0.97
HPS4-209ENST00000466781 ANTXR2P58335 489 aa9□□□□□ -0.97
HPS4-209ENST00000466781 RHOAP61586 193 aa9□□□□□ -0.97
HPS4-209ENST00000466781 RPS6P62753 249 aaKnown RBP9□□□□□ -0.97
HPS4-209ENST00000466781 GLRA4Q5JXX5 417 aa9□□□□□ -0.97
HPS4-209ENST00000466781 CCDC81Q6ZN84 652 aa9□□□□□ -0.97
HPS4-209ENST00000466781 C3orf62Q6ZUJ4 267 aa9□□□□□ -0.97
HPS4-209ENST00000466781 DENND5BQ6ZUT9 1274 aa9□□□□□ -0.97
HPS4-209ENST00000466781 SYTL1Q8IYJ3 562 aa9□□□□□ -0.97
HPS4-209ENST00000466781 CAMKK1Q8N5S9 505 aa9□□□□□ -0.97
HPS4-209ENST00000466781 RIT2Q99578 217 aa9□□□□□ -0.97
HPS4-209ENST00000466781 CIPCQ9C0C6 399 aa9□□□□□ -0.97
HPS4-209ENST00000466781 TMEM39AQ9NV64 488 aa9□□□□□ -0.97
HPS4-209ENST00000466781 MTO1Q9Y2Z2 717 aaKnown RBP9□□□□□ -0.97
HPS4-209ENST00000466781 USP1O94782 785 aa9□□□□□ -0.97
HPS4-209ENST00000466781 BMP10O95393 424 aa9□□□□□ -0.97
HPS4-209ENST00000466781 CHN1P15882 459 aa9□□□□□ -0.97
HPS4-209ENST00000466781 GARTP22102 1010 aa9□□□□□ -0.97
HPS4-209ENST00000466781 MAGEA9P43362 315 aa9□□□□□ -0.97
HPS4-209ENST00000466781 GUCY1A3Q02108 690 aa9□□□□□ -0.97
HPS4-209ENST00000466781 SGCGQ13326 291 aa9□□□□□ -0.97
HPS4-209ENST00000466781 GALNTL6Q49A17 601 aa9□□□□□ -0.97
HPS4-209ENST00000466781 RGMBQ6NW40 437 aa9□□□□□ -0.97
HPS4-209ENST00000466781 ZCCHC8Q6NZY4 707 aaKnown RBP9□□□□□ -0.97
HPS4-209ENST00000466781 LRIG3Q6UXM1 1119 aa9□□□□□ -0.97
HPS4-209ENST00000466781 DEFB128Q7Z7B8 93 aa9□□□□□ -0.97
HPS4-209ENST00000466781 ADGRA1Q86SQ6 560 aa9□□□□□ -0.97
HPS4-209ENST00000466781 MS4A14Q96JA4 679 aa9□□□□□ -0.97
HPS4-209ENST00000466781 XPO6Q96QU8 1125 aaKnown RBP9□□□□□ -0.97
HPS4-209ENST00000466781 MTG1Q9BT17 334 aaPredicted RBP9□□□□□ -0.97
HPS4-209ENST00000466781 TRIM8Q9BZR9 551 aa9□□□□□ -0.97
HPS4-209ENST00000466781 CLPBQ9H078 707 aa9□□□□□ -0.97
HPS4-209ENST00000466781 HMX1Q9NP08 348 aaPredicted RBP9□□□□□ -0.97
HPS4-209ENST00000466781 LZTS1Q9Y250 596 aa9□□□□□ -0.97
HPS4-209ENST00000466781 NCKAP1Q9Y2A7 1128 aa9□□□□□ -0.97
HPS4-209ENST00000466781 TMX2Q9Y320 296 aa9□□□□□ -0.97
HPS4-209ENST00000466781 ADGRG1Q9Y653 693 aa9□□□□□ -0.97
HPS4-209ENST00000466781 CCDC85CA6NKD9 419 aa9□□□□□ -0.97
HPS4-209ENST00000466781 ZC2HC1CQ53FD0 456 aaPredicted RBP9□□□□□ -0.97
HPS4-209ENST00000466781 ZNF280DQ6N043 979 aa9□□□□□ -0.97
HPS4-209ENST00000466781 LAYNQ6UX15 382 aa9□□□□□ -0.97
HPS4-209ENST00000466781 FAM71DQ8N9W8 422 aa9□□□□□ -0.97
HPS4-209ENST00000466781 CASP10Q92851 521 aa9□□□□□ -0.97
HPS4-209ENST00000466781 CNDP1Q96KN2 507 aa9□□□□□ -0.97
HPS4-209ENST00000466781 CCT7Q99832 543 aa9□□□□□ -0.97
HPS4-209ENST00000466781 THUMPD3Q9BV44 507 aaKnown RBP9□□□□□ -0.97
HPS4-209ENST00000466781 FAM205AQ6ZU69 1335 aa9□□□□□ -0.97
HPS4-209ENST00000466781 COL3A1P02461 1466 aaPredicted RBP9□□□□□ -0.97
HPS4-209ENST00000466781 MGAT4DA6NG13 374 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 CRTAMO95727 393 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 TM4SF1P30408 202 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 PRKAA1Q13131 559 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 CHI3L2Q15782 390 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 HLA-DQA1Q5Y7H0 255 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 RINLQ6ZS11 566 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 PRPF39Q86UA1 669 aaKnown RBP8.99□□□□□ -0.97
HPS4-209ENST00000466781 TXNRD3Q86VQ6 643 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 GALNT4Q8N4A0 578 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 ZNF333Q96JL9 665 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 BBS2Q9BXC9 721 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 MRPS26Q9BYN8 205 aaKnown RBP8.99□□□□□ -0.97
HPS4-209ENST00000466781 OSBPL8Q9BZF1 889 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms