RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 MARCH6O60337 910 aa4.81□□□□□ -1.64
CHMP2B-202ENST00000466696 IBSPP21815 317 aaPredicted RBP4.81□□□□□ -1.64
CHMP2B-202ENST00000466696 MTHFSP49914 203 aa4.81□□□□□ -1.64
CHMP2B-202ENST00000466696 COPB1P53618 953 aaKnown RBP4.81□□□□□ -1.64
CHMP2B-202ENST00000466696 INSCQ1MX18 579 aa4.81□□□□□ -1.64
CHMP2B-202ENST00000466696 PTCHD3Q3KNS1 767 aa4.81□□□□□ -1.64
CHMP2B-202ENST00000466696 RUSC1-AS1Q66K80 236 aa4.81□□□□□ -1.64
CHMP2B-202ENST00000466696 ANO7Q6IWH7 933 aa4.81□□□□□ -1.64
CHMP2B-202ENST00000466696 TMEM65Q6PI78 240 aa4.81□□□□□ -1.64
CHMP2B-202ENST00000466696 MAP4K1Q92918 833 aa4.81□□□□□ -1.64
CHMP2B-202ENST00000466696 SIGLEC11Q96RL6 698 aa4.81□□□□□ -1.64
CHMP2B-202ENST00000466696 ADGRE3Q9BY15 652 aa4.81□□□□□ -1.64
CHMP2B-202ENST00000466696 TRIM5Q9C035 493 aa4.81□□□□□ -1.64
CHMP2B-202ENST00000466696 ZNF518BQ9C0D4 1074 aa4.81□□□□□ -1.64
CHMP2B-202ENST00000466696 ZNF580Q9UK33 172 aa4.81□□□□□ -1.64
CHMP2B-202ENST00000466696 MAFFQ9ULX9 164 aa4.81□□□□□ -1.64
CHMP2B-202ENST00000466696 E2F8A0AVK6 867 aa4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 TMPRSS11DO60235 418 aa4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 IGSF3O75054 1194 aa4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 OAZ2O95190 189 aa4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 KITP10721 976 aa4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 EN2P19622 333 aaPredicted RBP4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 HOXD9P28356 352 aaPredicted RBP4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 CCKARP32238 428 aa4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 DIO1P49895 249 aa4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 LINC00205P59089 165 aa4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 ZNF91Q05481 1191 aa4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 LARS2Q15031 903 aaKnown RBP4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 GPR162Q16538 588 aa4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 PTPROQ16827 1216 aa4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 TRIM71Q2Q1W2 868 aaKnown RBP4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 ANO6Q4KMQ2 910 aa4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 DEF8Q6ZN54 512 aa4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 LIX1LQ8IVB5 337 aa4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 LINC01465Q8N7H1 131 aa4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 DNAJB14Q8TBM8 379 aa4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 NT5C1BQ96P26 610 aa4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 PPP1R9BQ96SB3 815 aa4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 VN1R3Q9BXE9 311 aa4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 ZMAT3Q9HA38 289 aaKnown RBP4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 SMURF2Q9HAU4 748 aa4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 A1CFQ9NQ94 594 aaKnown RBP4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 GAR1Q9NY12 217 aaKnown RBP4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 CDY1Q9Y6F8 540 aa4.8□□□□□ -1.64
CHMP2B-202ENST00000466696 ZMYM2Q9UBW7 1377 aa4.79□□□□□ -1.64
CHMP2B-202ENST00000466696 TMEM233B4DJY2 109 aa4.79□□□□□ -1.64
CHMP2B-202ENST00000466696 APEHP13798 732 aaKnown RBP4.79□□□□□ -1.64
CHMP2B-202ENST00000466696 CREB1P16220 341 aa4.79□□□□□ -1.64
CHMP2B-202ENST00000466696 AGFG1P52594 562 aaKnown RBP4.79□□□□□ -1.64
CHMP2B-202ENST00000466696 ID2Q02363 134 aa4.79□□□□□ -1.64
CHMP2B-202ENST00000466696 PIN1Q13526 163 aaPredicted RBP4.79□□□□□ -1.64
CHMP2B-202ENST00000466696 DCAF12L1Q5VU92 463 aa4.79□□□□□ -1.64
CHMP2B-202ENST00000466696 VSTM1Q6UX27 236 aa4.79□□□□□ -1.64
CHMP2B-202ENST00000466696 RANBP10Q6VN20 620 aa4.79□□□□□ -1.64
CHMP2B-202ENST00000466696 DCDC5Q6ZRR9 648 aa4.79□□□□□ -1.64
CHMP2B-202ENST00000466696 SLC35G2Q8TBE7 412 aa4.79□□□□□ -1.64
CHMP2B-202ENST00000466696 CTHRC1Q96CG8 243 aa4.79□□□□□ -1.64
CHMP2B-202ENST00000466696 SUCLG2Q96I99 432 aa4.79□□□□□ -1.64
CHMP2B-202ENST00000466696 HS6ST2Q96MM7 605 aa4.79□□□□□ -1.64
CHMP2B-202ENST00000466696 ACO2Q99798 780 aaKnown RBP4.79□□□□□ -1.64
CHMP2B-202ENST00000466696 RHOBTB2Q9BYZ6 727 aa4.79□□□□□ -1.64
CHMP2B-202ENST00000466696 FOXP1Q9H334 677 aaPredicted RBP4.79□□□□□ -1.64
CHMP2B-202ENST00000466696 TRIM36Q9NQ86 728 aa4.79□□□□□ -1.64
CHMP2B-202ENST00000466696 POT1Q9NUX5 634 aa4.79□□□□□ -1.64
CHMP2B-202ENST00000466696 MGAT4CQ9UBM8 478 aa4.79□□□□□ -1.64
CHMP2B-202ENST00000466696 LPAR3Q9UBY5 353 aa4.79□□□□□ -1.64
CHMP2B-202ENST00000466696 TTC3P53804 2025 aa4.79□□□□□ -1.64
CHMP2B-202ENST00000466696 IGKV2D-30A0A075B6S6 120 aa4.78□□□□□ -1.64
CHMP2B-202ENST00000466696 CCP110O43303 1012 aa4.78□□□□□ -1.64
CHMP2B-202ENST00000466696 RGS10O43665 173 aa4.78□□□□□ -1.64
CHMP2B-202ENST00000466696 TLR2O60603 784 aa4.78□□□□□ -1.64
CHMP2B-202ENST00000466696 SRGAP2O75044 1071 aa4.78□□□□□ -1.64
CHMP2B-202ENST00000466696 ALDH1L1O75891 902 aa4.78□□□□□ -1.64
CHMP2B-202ENST00000466696 RASAL1O95294 804 aa4.78□□□□□ -1.64
CHMP2B-202ENST00000466696 UQCRC1P31930 480 aa4.78□□□□□ -1.64
CHMP2B-202ENST00000466696 TIRAPP58753 221 aa4.78□□□□□ -1.64
CHMP2B-202ENST00000466696 SRSF1Q07955 248 aaKnown RBP eCLIP4.78□□□□□ -1.64
CHMP2B-202ENST00000466696 TMTC4Q5T4D3 741 aa4.78□□□□□ -1.64
CHMP2B-202ENST00000466696 CACHD1Q5VU97 1274 aa4.78□□□□□ -1.64
CHMP2B-202ENST00000466696 B3GNT9Q6UX72 402 aa4.78□□□□□ -1.64
CHMP2B-202ENST00000466696 NGDNQ8NEJ9 315 aaKnown RBP4.78□□□□□ -1.64
CHMP2B-202ENST00000466696 MAFAQ8NHW3 353 aaPredicted RBP4.78□□□□□ -1.64
CHMP2B-202ENST00000466696 PPP1R35Q8TAP8 253 aa4.78□□□□□ -1.64
CHMP2B-202ENST00000466696 SPSB4Q96A44 273 aa4.78□□□□□ -1.64
CHMP2B-202ENST00000466696 TYW1Q9NV66 732 aaKnown RBP4.78□□□□□ -1.64
CHMP2B-202ENST00000466696 NOP58Q9Y2X3 529 aaKnown RBP4.78□□□□□ -1.64
CHMP2B-202ENST00000466696 CNTNAP2Q9UHC6 1331 aa4.77□□□□□ -1.65
CHMP2B-202ENST00000466696 LOC102723971A0A1B0GUV8 181 aa4.77□□□□□ -1.65
CHMP2B-202ENST00000466696 CD3EAPO15446 510 aaKnown RBP4.77□□□□□ -1.65
CHMP2B-202ENST00000466696 SPRY2O43597 315 aa4.77□□□□□ -1.65
CHMP2B-202ENST00000466696 SLC7A1P30825 629 aa4.77□□□□□ -1.65
CHMP2B-202ENST00000466696 RPS13P62277 151 aaKnown RBP4.77□□□□□ -1.65
CHMP2B-202ENST00000466696 TIAL1Q01085 375 aaKnown RBP eCLIP4.77□□□□□ -1.65
CHMP2B-202ENST00000466696 KCNB1Q14721 858 aa4.77□□□□□ -1.65
CHMP2B-202ENST00000466696 MIDNQ504T8 468 aa4.77□□□□□ -1.65
CHMP2B-202ENST00000466696 AWAT1Q58HT5 328 aa4.77□□□□□ -1.65
CHMP2B-202ENST00000466696 ANKRD13BQ86YJ7 626 aa4.77□□□□□ -1.65
CHMP2B-202ENST00000466696 C16orf71Q8IYS4 520 aaPredicted RBP4.77□□□□□ -1.65
CHMP2B-202ENST00000466696 IL31RAQ8NI17 732 aa4.77□□□□□ -1.65
CHMP2B-202ENST00000466696 JPH3Q8WXH2 748 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms