RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 HS3ST4Q9Y661 456 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 PIPSLA2A3N6 862 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 ADM5C9JUS6 153 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 IPO5O00410 1097 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 PPM1DO15297 605 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 SLC16A3O15427 465 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 ZSCAN9O15535 394 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 FOXD2O60548 495 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 FAM155BO75949 473 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 EGR2P11161 476 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 HGFP14210 728 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 PPP3CBP16298 524 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 CST5P28325 142 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 RBL1P28749 1068 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 ADORA2AP29274 412 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 ZEB1P37275 1124 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 MTHFSP49914 203 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 HNRNPMP52272 730 aaKnown RBP eCLIP5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 SCAPQ12770 1279 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 EFR3AQ14156 821 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 ALFQ53S48 1182 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 DEPDC1Q5TB30 811 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 RNF207Q6ZRF8 634 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 RHOUQ7L0Q8 258 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 GPR149Q86SP6 731 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 SLC44A2Q8IWA5 706 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 PALM2Q8IXS6 379 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 SOCS4Q8WXH5 440 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 ZSCAN31Q96LW9 406 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 WDR24Q96S15 920 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 FAM167BQ9BTA0 163 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 ALG8Q9BVK2 526 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 PABPC3Q9H361 631 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 GLOD4Q9HC38 313 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 ITM2CQ9NQX7 267 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 RXFP3Q9NSD7 469 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 KIF17Q9P2E2 1029 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 NKX1-2Q9UD57 310 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 STEAP1Q9UHE8 339 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 NFU1Q9UMS0 254 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 SH2B3Q9UQQ2 575 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 DRG1Q9Y295 367 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 SNX14Q9Y5W7 946 aa5.07□□□□□ -1.6
CDC42BPA-211ENST00000466538 PNMA6EA0A0J9YXQ4 647 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 CENPVL1A0A0U1RR11 272 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 A1L4Q6 167 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 BTBD11A6QL63 1104 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 M0R3H8 397 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 PSMD9O00233 223 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 FCHO1O14526 889 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 DNPH1O43598 174 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 ACTL6BO94805 426 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 ZNF20P17024 532 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 CDK7P50613 346 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 AP2B1P63010 937 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 ADAM17P78536 824 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 EFEMP1Q12805 493 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 FZD5Q13467 585 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 FHL3Q13643 280 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 SF3B3Q15393 1217 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 CDSNQ15517 529 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 TRIM60Q495X7 471 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 ZNF618Q5T7W0 954 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 SLC9A4Q6AI14 798 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 SULT6B1Q6IMI4 303 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 CYP26C1Q6V0L0 522 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 SPPL3Q8TCT6 385 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 LPIN2Q92539 896 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 PLEKHG4BQ96PX9 1271 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 RTKNQ9BST9 563 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 PRDM8Q9NQV8 689 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 KLC4Q9NSK0 619 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 ZNF69Q9UC07 566 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 SLC27A6Q9Y2P4 619 aa5.06□□□□□ -1.6
CDC42BPA-211ENST00000466538 EFCAB8A8MWE9 144 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 PCDH17O14917 1159 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 DHHO43323 396 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 SH3BP5O60239 455 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 LPXNO60711 386 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 USP1O94782 785 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 PRKCBP05771 671 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 FOLR3P41439 243 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 SP2Q02086 613 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 TAP1Q03518 808 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 TP53BP2Q13625 1128 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 BMPR2Q13873 1038 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 CSHL1Q14406 222 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 ACOX1Q15067 660 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 LY6KQ17RY6 165 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 NBPF8Q3BBV2 869 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 ADCK5Q3MIX3 580 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 SPATS1Q496A3 300 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 SPDYAQ5MJ70 313 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 FBXO47Q5MNV8 452 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 LY6G5CQ5SRR4 150 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 CCDC70Q6NSX1 233 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 CLEC9AQ6UXN8 241 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 FSTL5Q8N475 847 aaPredicted RBP5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 OR6Y1Q8NGX8 325 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms