RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 SLC22A17Q8WUG5 538 aa10.55□□□□□ -0.72
PMF1-204ENST00000466489 CENPTQ96BT3 561 aa10.55□□□□□ -0.72
PMF1-204ENST00000466489 RIPOR3Q96MK2 946 aa10.55□□□□□ -0.72
PMF1-204ENST00000466489 SYT15Q9BQS2 421 aa10.55□□□□□ -0.72
PMF1-204ENST00000466489 PI4K2AQ9BTU6 479 aa10.55□□□□□ -0.72
PMF1-204ENST00000466489 ZCWPW1Q9H0M4 648 aa10.55□□□□□ -0.72
PMF1-204ENST00000466489 PIDD1Q9HB75 910 aa10.55□□□□□ -0.72
PMF1-204ENST00000466489 CYP4F11Q9HBI6 524 aa10.55□□□□□ -0.72
PMF1-204ENST00000466489 ZDHHC7Q9NXF8 308 aa10.55□□□□□ -0.72
PMF1-204ENST00000466489 HSFX1Q9UBD0 423 aa10.55□□□□□ -0.72
PMF1-204ENST00000466489 MTRF1LQ9UGC7 380 aaKnown RBP10.55□□□□□ -0.72
PMF1-204ENST00000466489 CD207Q9UJ71 328 aa10.55□□□□□ -0.72
PMF1-204ENST00000466489 FBXW11Q9UKB1 542 aa10.55□□□□□ -0.72
PMF1-204ENST00000466489 AMFRQ9UKV5 643 aa10.55□□□□□ -0.72
PMF1-204ENST00000466489 POLIQ9UNA4 740 aa10.55□□□□□ -0.72
PMF1-204ENST00000466489 WDR27A2RRH5 827 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 GABRDO14764 452 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 TBC1D4O60343 1298 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 SRGAP2O75044 1071 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 ABLIM3O94929 683 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 HEXIM1O94992 359 aaKnown RBP10.54□□□□□ -0.72
PMF1-204ENST00000466489 C8AP07357 584 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 EPCAMP16422 314 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 HOXA9P31269 272 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 ASPAP45381 313 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 ALDH1A3P47895 512 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 TUFMP49411 452 aaKnown RBP10.54□□□□□ -0.72
PMF1-204ENST00000466489 GUCY2DQ02846 1103 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 GFPT1Q06210 699 aaPredicted RBP10.54□□□□□ -0.72
PMF1-204ENST00000466489 IFFO1Q0D2I5 559 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 CUL2Q13617 745 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 COL19A1Q14993 1142 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 SLMAPQ14BN4 828 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 VEPH1Q14D04 833 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 TAF12Q16514 161 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 ODF2Q5BJF6 829 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 SPOPLQ6IQ16 392 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 SYDE1Q6ZW31 735 aaPredicted RBP10.54□□□□□ -0.72
PMF1-204ENST00000466489 ENOSF1Q7L5Y1 443 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 TADA2BQ86TJ2 420 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 TCEAL8Q8IYN2 117 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 SLC7A14Q8TBB6 771 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 FUBP3Q96I24 572 aaKnown RBP eCLIP10.54□□□□□ -0.72
PMF1-204ENST00000466489 NECTIN4Q96NY8 510 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 NT5C1AQ9BXI3 368 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 BCO2Q9BYV7 579 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 INTS2Q9H0H0 1204 aaKnown RBP10.54□□□□□ -0.72
PMF1-204ENST00000466489 SMYD3Q9H7B4 428 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 EPB41L5Q9HCM4 733 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.54□□□□□ -0.727e-11■■■■■ 48.1
PMF1-204ENST00000466489 ADAMTS1Q9UHI8 967 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 NAGPAQ9UK23 515 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 BARX2Q9UMQ3 279 aaPredicted RBP10.54□□□□□ -0.72
PMF1-204ENST00000466489 PCDHB5Q9Y5E4 795 aa10.54□□□□□ -0.72
PMF1-204ENST00000466489 RCCD1A6NED2 376 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 KRIT1O00522 736 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 DLL1O00548 723 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 KCNK3O14649 394 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 ZNF263O14978 683 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 LINC01565O15544 149 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 ADAM12O43184 909 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 TBX10O75333 385 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 ZMYND10O75800 440 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 GLP2RO95838 553 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 FAM107AO95990 144 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 PDGFRBP09619 1106 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 WEE2P0C1S8 567 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 SPATA31D3P0C874 917 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 CD58P19256 250 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 NR1D1P20393 614 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 ACAT1P24752 427 aaKnown RBP10.53□□□□□ -0.72
PMF1-204ENST00000466489 RDXP35241 583 aaKnown RBP10.53□□□□□ -0.72
PMF1-204ENST00000466489 MTHFRP42898 656 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 EPHB3P54753 998 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 MFAP3P55082 362 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 RPL10AP62906 217 aaKnown RBP10.53□□□□□ -0.72
PMF1-204ENST00000466489 GNGT1P63211 74 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 MRPS5P82675 430 aaKnown RBP10.53□□□□□ -0.72
PMF1-204ENST00000466489 GCNT1Q02742 428 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 CAV1Q03135 178 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 INCA1Q0VD86 236 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 SMAD4Q13485 552 aaKnown RBP10.53□□□□□ -0.72
PMF1-204ENST00000466489 BYSLQ13895 437 aaKnown RBP10.53□□□□□ -0.72
PMF1-204ENST00000466489 ATAT1Q5SQI0 421 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 C6orf118Q5T5N4 469 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 LILRA6Q6PI73 481 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 SPATA31D4Q6ZUB0 917 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 LIMS2Q7Z4I7 341 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 IRF2BP2Q7Z5L9 587 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 ITIH5Q86UX2 942 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 SUGP1Q8IWZ8 645 aaKnown RBP10.53□□□□□ -0.72
PMF1-204ENST00000466489 RASGEF1CQ8N431 466 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 B3GALNT2Q8NCR0 500 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 CMASQ8NFW8 434 aaPredicted RBP10.53□□□□□ -0.72
PMF1-204ENST00000466489 OR10T2Q8NGX3 314 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 MYCBPAPQ8TBZ2 947 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 KBTBD7Q8WVZ9 684 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 ATXN2LQ8WWM7 1075 aaKnown RBP10.53□□□□□ -0.72
PMF1-204ENST00000466489 RFFLQ8WZ73 363 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 SEC14L1Q92503 715 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms