RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 FARP1Q9Y4F1 1045 aaPredicted RBP17.07■□□□□ 0.32
SLX4-202ENST00000466154 ZBED1O96006 694 aa17.06■□□□□ 0.32
SLX4-202ENST00000466154 FGFR1P11362 822 aa17.06■□□□□ 0.32
SLX4-202ENST00000466154 AKAP5P24588 427 aa17.06■□□□□ 0.32
SLX4-202ENST00000466154 RBP5P82980 135 aa17.06■□□□□ 0.32
SLX4-202ENST00000466154 NR1H3Q13133 447 aa17.06■□□□□ 0.32
SLX4-202ENST00000466154 PTK7Q13308 1070 aa17.06■□□□□ 0.32
SLX4-202ENST00000466154 RSAD1Q9HA92 442 aa17.06■□□□□ 0.32
SLX4-202ENST00000466154 H3BRB1 525 aa17.06■□□□□ 0.32
SLX4-202ENST00000466154 CBX6O95503 412 aa17.06■□□□□ 0.32
SLX4-202ENST00000466154 GSTA1P08263 222 aa17.06■□□□□ 0.32
SLX4-202ENST00000466154 TNFAIP2Q03169 654 aa17.06■□□□□ 0.32
SLX4-202ENST00000466154 RELL1Q8IUW5 271 aa17.06■□□□□ 0.32
SLX4-202ENST00000466154 DHX35Q9H5Z1 703 aaKnown RBP17.06■□□□□ 0.32
SLX4-202ENST00000466154 TUT1Q9H6E5 874 aaKnown RBP17.06■□□□□ 0.32
SLX4-202ENST00000466154 SDC4P31431 198 aa17.06■□□□□ 0.32
SLX4-202ENST00000466154 ZNF143P52747 638 aaPredicted RBP17.06■□□□□ 0.32
SLX4-202ENST00000466154 ARHGAP1Q07960 439 aa17.06■□□□□ 0.32
SLX4-202ENST00000466154 DPP9Q86TI2 863 aa17.06■□□□□ 0.32
SLX4-202ENST00000466154 ZNF75CPQ92670 426 aaPredicted RBP17.06■□□□□ 0.32
SLX4-202ENST00000466154 STAMBPL1Q96FJ0 436 aa17.06■□□□□ 0.32
SLX4-202ENST00000466154 FAM111AQ96PZ2 611 aa17.06■□□□□ 0.32
SLX4-202ENST00000466154 CNPY3Q9BT09 278 aa17.06■□□□□ 0.32
SLX4-202ENST00000466154 SLC13A1Q9BZW2 595 aa17.06■□□□□ 0.32
SLX4-202ENST00000466154 TUBGCP4Q9UGJ1 667 aa17.06■□□□□ 0.32
SLX4-202ENST00000466154 SMG5Q9UPR3 1016 aaKnown RBP17.06■□□□□ 0.32
SLX4-202ENST00000466154 MCF2P10911 925 aa17.05■□□□□ 0.32
SLX4-202ENST00000466154 IRX4P78413 519 aa17.05■□□□□ 0.32
SLX4-202ENST00000466154 FAAP100Q0VG06 881 aa17.05■□□□□ 0.32
SLX4-202ENST00000466154 BNIP1Q12981 228 aa17.05■□□□□ 0.32
SLX4-202ENST00000466154 CATSPER4Q7RTX7 472 aa17.05■□□□□ 0.32
SLX4-202ENST00000466154 KIRREL3Q8IZU9 778 aa17.05■□□□□ 0.32
SLX4-202ENST00000466154 DPEP3Q9H4B8 488 aa17.05■□□□□ 0.32
SLX4-202ENST00000466154 HESX1Q9UBX0 185 aa17.05■□□□□ 0.32
SLX4-202ENST00000466154 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.05■□□□□ 0.32
SLX4-202ENST00000466154 C2orf71A6NGG8 1288 aa17.05■□□□□ 0.32
SLX4-202ENST00000466154 LPXNO60711 386 aa17.05■□□□□ 0.32
SLX4-202ENST00000466154 BMPR2Q13873 1038 aa17.05■□□□□ 0.32
SLX4-202ENST00000466154 ACCSLQ4AC99 568 aa17.05■□□□□ 0.32
SLX4-202ENST00000466154 GIMAP7Q8NHV1 300 aa17.05■□□□□ 0.32
SLX4-202ENST00000466154 NDRG1Q92597 394 aaKnown RBP17.05■□□□□ 0.32
SLX4-202ENST00000466154 CEP41Q9BYV8 373 aa17.05■□□□□ 0.32
SLX4-202ENST00000466154 IQCGQ9H095 443 aaKnown RBP17.05■□□□□ 0.32
SLX4-202ENST00000466154 ACTL7BQ9Y614 415 aa17.05■□□□□ 0.32
SLX4-202ENST00000466154 CCDC195A0A1B0GUA6 201 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 A8MXQ7 604 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 MGRN1O60291 552 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 PYGBP11216 843 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 MAP2K2P36507 400 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 SLC26A2P50443 739 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 CCDC91Q7Z6B0 441 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 LRRC6Q86X45 466 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 GBP7Q8N8V2 638 aaPredicted RBP17.04■□□□□ 0.32
SLX4-202ENST00000466154 CMASQ8NFW8 434 aaPredicted RBP17.04■□□□□ 0.32
SLX4-202ENST00000466154 KCNV2Q8TDN2 545 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 FAM149B1Q96BN6 582 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 MCRS1Q96EZ8 462 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 OSMRQ99650 979 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 TCRBV9S1A1TA0A576 114 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 SPDYE5A6NIY4 337 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 ASB14A6NK59 587 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 CXCL11O14625 94 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 TSPAN1O60635 241 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 CCDC130P13994 396 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 ALDH3A1P30838 453 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 KLHL38Q2WGJ6 581 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 CCDC14Q49A88 953 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 CASC4Q6P4E1 433 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 OTOAQ7RTW8 1153 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 PRPF39Q86UA1 669 aaKnown RBP17.04■□□□□ 0.32
SLX4-202ENST00000466154 AGAP11Q8TF27 550 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 EIF2AQ9BY44 585 aaKnown RBP17.04■□□□□ 0.32
SLX4-202ENST00000466154 SLC24A2Q9UI40 661 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 CLEC11AQ9Y240 323 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 C2CD4BA6NLJ0 364 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 LAMC2Q13753 1193 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 PDK4Q16654 411 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 EFHC2Q5JST6 749 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 MTHFD1LQ6UB35 978 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 MAP7D3Q8IWC1 876 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 CHKBQ9Y259 395 aa17.04■□□□□ 0.32
SLX4-202ENST00000466154 DNAJC25-GNG10A0A024R161 153 aa17.03■□□□□ 0.32
SLX4-202ENST00000466154 CFAP73A6NFT4 308 aa17.03■□□□□ 0.32
SLX4-202ENST00000466154 APOL1O14791 398 aa17.03■□□□□ 0.32
SLX4-202ENST00000466154 ZNF200P98182 395 aaPredicted RBP17.03■□□□□ 0.32
SLX4-202ENST00000466154 ZBTB16Q05516 673 aa17.03■□□□□ 0.32
SLX4-202ENST00000466154 ZNF484Q5JVG2 852 aa17.03■□□□□ 0.32
SLX4-202ENST00000466154 FYB2Q5VWT5 728 aa17.03■□□□□ 0.32
SLX4-202ENST00000466154 TTC30AQ86WT1 665 aa17.03■□□□□ 0.32
SLX4-202ENST00000466154 DENND1AQ8TEH3 1009 aa17.03■□□□□ 0.32
SLX4-202ENST00000466154 FNIP1Q8TF40 1166 aa17.03■□□□□ 0.32
SLX4-202ENST00000466154 SLC10A4Q96EP9 437 aa17.03■□□□□ 0.32
SLX4-202ENST00000466154 CYTH2Q99418 400 aa17.03■□□□□ 0.32
SLX4-202ENST00000466154 SNRNP25Q9BV90 132 aaKnown RBP17.03■□□□□ 0.32
SLX4-202ENST00000466154 ASB7Q9H672 318 aa17.03■□□□□ 0.32
SLX4-202ENST00000466154 GOLGA2P5Q9HBQ8 144 aa17.03■□□□□ 0.32
SLX4-202ENST00000466154 PRKAG3Q9UGI9 489 aa17.03■□□□□ 0.32
SLX4-202ENST00000466154 MAGED2Q9UNF1 606 aaPredicted RBP17.03■□□□□ 0.32
SLX4-202ENST00000466154 EIF4E1BA6NMX2 242 aaKnown RBP17.03■□□□□ 0.32
SLX4-202ENST00000466154 PTPN7P35236 360 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms