RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 ST7Q9NRC1 585 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 DZANK1Q9NVP4 752 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 COMMD8Q9NX08 183 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 ADAM22Q9P0K1 906 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 ASB3Q9Y575 518 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 ADGRG1Q9Y653 693 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 NUP210Q8TEM1 1887 aaPredicted RBP11.72□□□□□ -0.53
VCP-204ENST00000466100 ANKRD62A6NC57 917 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 RCCD1A6NED2 376 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 CCL16O15467 120 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 ATMINO43313 823 aaPredicted RBP11.72□□□□□ -0.53
VCP-204ENST00000466100 TBX10O75333 385 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 TADA3O75528 432 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 FBXO21O94952 628 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 RTN3O95197 1032 aaPredicted RBP11.72□□□□□ -0.53
VCP-204ENST00000466100 LCP1P13796 627 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 RRM1P23921 792 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 SCNN1AP37088 669 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 PGFP49763 221 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 EPHB3P54753 998 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 EPHA5P54756 1037 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 ZNF268Q14587 947 aaPredicted RBP11.72□□□□□ -0.53
VCP-204ENST00000466100 PPM1LQ5SGD2 360 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 PPP1R15BQ5SWA1 713 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 C10orf76Q5T2E6 689 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 PLEKHA7Q6IQ23 1121 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 SCUBE3Q8IX30 993 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 MSANTD4Q8NCY6 345 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 C3orf20Q8ND61 904 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 MYLIPQ8WY64 445 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 NDRG1Q92597 394 aaKnown RBP11.72□□□□□ -0.53
VCP-204ENST00000466100 KHSRPQ92945 711 aaKnown RBP eCLIP11.72□□□□□ -0.53
VCP-204ENST00000466100 ARHGEF26Q96DR7 871 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 GAS2L1Q99501 681 aaPredicted RBP11.72□□□□□ -0.53
VCP-204ENST00000466100 CDX2Q99626 313 aaPredicted RBP11.72□□□□□ -0.53
VCP-204ENST00000466100 THAP2Q9H0W7 228 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 SFXN1Q9H9B4 322 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 IL21Q9HBE4 155 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 LRRC4Q9HBW1 653 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 ZNF334Q9HCZ1 680 aaPredicted RBP11.72□□□□□ -0.53
VCP-204ENST00000466100 AVENQ9NQS1 362 aaPredicted RBP11.72□□□□□ -0.53
VCP-204ENST00000466100 CLEC1BQ9P126 229 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 DPP7Q9UHL4 492 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 INTUQ9ULD6 942 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 SCML2Q9UQR0 700 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 PCDHA13Q9Y5I0 950 aa11.72□□□□□ -0.53
VCP-204ENST00000466100 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.72□□□□□ -0.53
VCP-204ENST00000466100 A0A0U1RQJ8 604 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 NRG2O14511 850 aaPredicted RBP11.71□□□□□ -0.53
VCP-204ENST00000466100 PJA2O43164 708 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 NRDCO43847 1150 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 ZBED1O96006 694 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 LRG1P02750 347 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 CYP1A2P05177 515 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 H2AFZP0C0S5 128 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 USP17L7P0C7H9 530 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 TMEM253P0C7T8 217 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 ZDHHC11BP0C7U3 371 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 CSH1P0DML2 217 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 CSH2P0DML3 217 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 MYBL1P10243 752 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 IGFBP4P22692 258 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 LTBRP36941 435 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 MAGEA1P43355 309 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 VAV2P52735 878 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 MRPS5P82675 430 aaKnown RBP11.71□□□□□ -0.53
VCP-204ENST00000466100 VEPH1Q14D04 833 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 SPA17Q15506 151 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 ANKRD54Q6NXT1 300 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 SYCE2Q6PIF2 218 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 ELMSAN1Q6PJG2 1045 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 HFE2Q6ZVN8 426 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 H2AFVQ71UI9 128 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 SLC26A9Q7LBE3 791 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 DNAJB7Q7Z6W7 309 aaPredicted RBP11.71□□□□□ -0.53
VCP-204ENST00000466100 SCD5Q86SK9 330 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 TMEM150AQ86TG1 271 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 ITIH5Q86UX2 942 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 ZDHHC17Q8IUH5 632 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 SIX6OS1Q8N1H7 587 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 DEFB123Q8N688 67 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 ATRIPQ8WXE1 791 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 IRGQQ8WZA9 623 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 ZNF653Q96CK0 615 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 TRIM11Q96F44 468 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 PRKD2Q9BZL6 878 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 MIS12Q9H081 205 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 FBXO44Q9H4M3 255 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 IGFLR1Q9H665 355 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 SYNCQ9H7C4 482 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 ASNSD1Q9NWL6 643 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 MTMR10Q9NXD2 777 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 GMIPQ9P107 970 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 WDR35Q9P2L0 1181 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 TMEM59LQ9UK28 342 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 STRIP2Q9ULQ0 834 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 PYCARDQ9ULZ3 195 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 TFR2Q9UP52 801 aa11.71□□□□□ -0.53
VCP-204ENST00000466100 YJEFN3A6XGL0 299 aa11.7□□□□□ -0.54
VCP-204ENST00000466100 E7ENQ6 273 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms