RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 XPNPEP1Q9NQW7 623 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 MTUS1Q9ULD2 1270 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 PCDHA12Q9UN75 941 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 WASF3Q9UPY6 502 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 GINS2Q9Y248 185 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 PCDHB4Q9Y5E5 795 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 TRPV2Q9Y5S1 764 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 TCF20Q9UGU0 1960 aaKnown RBP5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 A0A1W2PQU0 124 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 MAFO75444 373 aaPredicted RBP5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 PARNO95453 639 aaKnown RBP5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 LRG1P02750 347 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 TCF3P15923 654 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 IBSPP21815 317 aaPredicted RBP5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 TECP42680 631 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 QARSP47897 775 aaKnown RBP5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 GPC3P51654 580 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 PSMC5P62195 406 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 GRIN1Q05586 938 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 TRIM29Q14134 588 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 RAB30Q15771 203 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 XKR3Q5GH77 459 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 FAM173BQ6P4H8 233 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 BORAQ6PGQ7 559 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 TEPPQ6URK8 271 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 TSHZ1Q6ZSZ6 1077 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 FAM124AQ86V42 546 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 CATSPER3Q86XQ3 398 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 TPH2Q8IWU9 490 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 NME8Q8N427 588 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 CELF2-AS1Q8N7Q2 184 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 FAM184AQ8NB25 1140 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 RDM1Q8NG50 284 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 PHOSPHO2Q8TCD6 241 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 GDPD5Q8WTR4 605 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 HNRNPLLQ8WVV9 542 aaKnown RBP5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 SEPT8Q92599 483 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 TMEM143Q96AN5 459 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 ZNF689Q96CS4 500 aaPredicted RBP5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 LCORQ96JN0 433 aaPredicted RBP5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 FAM167AQ96KS9 214 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 C17orf80Q9BSJ5 609 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 MMTAG2Q9BU76 263 aaKnown RBP5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 SSBP3Q9BWW4 388 aaPredicted RBP5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 KRTAP3-1Q9BYR8 98 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 MTIF3Q9H2K0 278 aaKnown RBP5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 EPB41L1Q9H4G0 881 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 DHX33Q9H6R0 707 aaKnown RBP5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 SLC28A3Q9HAS3 691 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 UPF2Q9HAU5 1272 aaKnown RBP5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 IFT122Q9HBG6 1241 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 ERVK-5Q9HDB9 667 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 ST7Q9NRC1 585 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 NRBP2Q9NSY0 501 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 TCEAL9Q9UHQ7 104 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 MSRAQ9UJ68 235 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 ST3GAL5Q9UNP4 418 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 MYRFQ9Y2G1 1151 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 STXBP5LQ9Y2K9 1186 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 TCHHQ07283 1943 aa5.34□□□□□ -1.55
EXOSC3-204ENST00000465860 TTC28Q96AY4 2481 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 A0A087WZ62 844 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 AGRPO00253 132 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 B4GALT3O60512 393 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 RPS6KA5O75582 802 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 DGKIO75912 1065 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 EDN1P05305 212 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 FOSL2P15408 326 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 ATF7P17544 494 aaPredicted RBP5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 YWHABP31946 246 aaKnown RBP5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 CRYBB1P53674 252 aaPredicted RBP5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 MLLT6P55198 1093 aaPredicted RBP5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 ARID5AQ03989 594 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 MAP4K2Q12851 820 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 EMC2Q15006 297 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 SAFBQ15424 915 aaKnown RBP eCLIP5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 XKR9Q5GH70 373 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 FAM102BQ5T8I3 360 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 KCNK18Q7Z418 384 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 RSPH3Q86UC2 560 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 RHPN2Q8IUC4 686 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 C4orf19Q8IY42 314 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 IGSF22Q8N9C0 903 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 MAFAQ8NHW3 353 aaPredicted RBP5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 PRPF31Q8WWY3 499 aaKnown RBP5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 PPM1EQ8WY54 764 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 ARNTL2Q8WYA1 636 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 KCTD13Q8WZ19 329 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 APBB2Q92870 758 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 LOXL4Q96JB6 756 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 CEP170P1Q96L14 293 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 SAMD11Q96NU1 681 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 RAD9AQ99638 391 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 ADAM2Q99965 735 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 FDXACB1Q9BRP7 624 aaPredicted RBP5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 IER2Q9BTL4 223 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 JAM3Q9BX67 310 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 SUCLA2Q9P2R7 463 aaPredicted RBP5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 MYOTQ9UBF9 498 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 PPARGC1AQ9UBK2 798 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms