RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 CYP26A1O43174 497 aa21.43■■□□□ 1.02
SKA3-205ENST00000465471 SRFP11831 508 aa21.43■■□□□ 1.02
SKA3-205ENST00000465471 USP8P40818 1118 aa21.43■■□□□ 1.02
SKA3-205ENST00000465471 VIPR2P41587 438 aa21.43■■□□□ 1.02
SKA3-205ENST00000465471 TUBP50607 506 aa21.43■■□□□ 1.02
SKA3-205ENST00000465471 TPM4P67936 248 aa21.43■■□□□ 1.02
SKA3-205ENST00000465471 RAPGEF1Q13905 1077 aa21.43■■□□□ 1.02
SKA3-205ENST00000465471 ZNF268Q14587 947 aaPredicted RBP21.43■■□□□ 1.02
SKA3-205ENST00000465471 VITQ6UXI7 678 aa21.43■■□□□ 1.02
SKA3-205ENST00000465471 CCDC186Q7Z3E2 898 aa21.43■■□□□ 1.02
SKA3-205ENST00000465471 UBA3Q8TBC4 463 aa21.43■■□□□ 1.02
SKA3-205ENST00000465471 KCTD13Q8WZ19 329 aa21.43■■□□□ 1.02
SKA3-205ENST00000465471 SECISBP2LQ93073 1101 aaKnown RBP21.43■■□□□ 1.02
SKA3-205ENST00000465471 NAP1L5Q96NT1 182 aaPredicted RBP21.43■■□□□ 1.02
SKA3-205ENST00000465471 MED7O43513 233 aa21.42■■□□□ 1.02
SKA3-205ENST00000465471 NARSO43776 548 aaKnown RBP21.42■■□□□ 1.02
SKA3-205ENST00000465471 AVPR1AP37288 418 aa21.42■■□□□ 1.02
SKA3-205ENST00000465471 GPD2P43304 727 aa21.42■■□□□ 1.02
SKA3-205ENST00000465471 RPL34P49207 117 aaKnown RBP21.42■■□□□ 1.02
SKA3-205ENST00000465471 PGFP49763 221 aa21.42■■□□□ 1.02
SKA3-205ENST00000465471 POLR2FP61218 127 aaKnown RBP21.42■■□□□ 1.02
SKA3-205ENST00000465471 DEPDC1BQ8WUY9 529 aa21.42■■□□□ 1.02
SKA3-205ENST00000465471 USP13Q92995 863 aaPredicted RBP21.42■■□□□ 1.02
SKA3-205ENST00000465471 LRRC3BQ96PB8 259 aa21.42■■□□□ 1.02
SKA3-205ENST00000465471 EPHX3Q9H6B9 360 aa21.42■■□□□ 1.02
SKA3-205ENST00000465471 TRPC7Q9HCX4 862 aa21.42■■□□□ 1.02
SKA3-205ENST00000465471 SLC2A4RGQ9NR83 387 aa21.42■■□□□ 1.02
SKA3-205ENST00000465471 PCDHGC3Q9UN70 934 aa21.42■■□□□ 1.02
SKA3-205ENST00000465471 TRAV19A0A0A6YYK7 116 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 A0A1W2PQC6 194 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 HEPACAM2A8MVW5 462 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 GOLGA6L19H0YKK7 550 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 THAP12O43422 761 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 GABBR2O75899 941 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 CFHP08603 1231 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 USP17L7P0C7H9 530 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 PDE6CP51160 858 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 FANCCQ00597 558 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 PTK2Q05397 1052 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 FCHO2Q0JRZ9 810 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 NR1I3Q14994 352 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 FILIP1LQ4L180 1135 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 PM20D1Q6GTS8 502 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 PMF1Q6P1K2 205 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 DENND1BQ6P3S1 775 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 BHLHA9Q7RTU4 235 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 SLC47A2Q86VL8 602 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 MFSD6LQ8IWD5 586 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 SCML4Q8N228 414 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 NEK11Q8NG66 645 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 CYP2S1Q96SQ9 504 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 SMG9Q9H0W8 520 aaKnown RBP21.41■■□□□ 1.02
SKA3-205ENST00000465471 KIF9Q9HAQ2 790 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 CHORDC1Q9UHD1 332 aaPredicted RBP21.41■■□□□ 1.02
SKA3-205ENST00000465471 CCL26Q9Y258 94 aa21.41■■□□□ 1.02
SKA3-205ENST00000465471 TCF3P15923 654 aa21.4■■□□□ 1.02
SKA3-205ENST00000465471 PSMC3P17980 439 aa21.4■■□□□ 1.02
SKA3-205ENST00000465471 TKTL1P51854 596 aa21.4■■□□□ 1.02
SKA3-205ENST00000465471 BPIFB4P59827 614 aa21.4■■□□□ 1.02
SKA3-205ENST00000465471 SLC7A9P82251 487 aa21.4■■□□□ 1.02
SKA3-205ENST00000465471 SIGLEC14Q08ET2 396 aa21.4■■□□□ 1.02
SKA3-205ENST00000465471 SCD5Q86SK9 330 aa21.4■■□□□ 1.02
SKA3-205ENST00000465471 CELF5Q8N6W0 485 aaKnown RBP21.4■■□□□ 1.02
SKA3-205ENST00000465471 ARL14EPQ8N8R7 260 aaPredicted RBP21.4■■□□□ 1.02
SKA3-205ENST00000465471 RIN3Q8TB24 985 aa21.4■■□□□ 1.02
SKA3-205ENST00000465471 STK32AQ8WU08 396 aa21.4■■□□□ 1.02
SKA3-205ENST00000465471 ASIC4Q96FT7 647 aa21.4■■□□□ 1.02
SKA3-205ENST00000465471 HSFY1Q96LI6 401 aa21.4■■□□□ 1.02
SKA3-205ENST00000465471 RNF38Q9H0F5 515 aa21.4■■□□□ 1.02
SKA3-205ENST00000465471 CYLDQ9NQC7 956 aa21.4■■□□□ 1.02
SKA3-205ENST00000465471 TLR8Q9NR97 1041 aaKnown RBP21.4■■□□□ 1.02
SKA3-205ENST00000465471 TDP1Q9NUW8 608 aa21.4■■□□□ 1.02
SKA3-205ENST00000465471 OSER1Q9NX31 292 aa21.4■■□□□ 1.02
SKA3-205ENST00000465471 ARHGAP26Q9UNA1 814 aa21.4■■□□□ 1.02
SKA3-205ENST00000465471 SERPINC1P01008 464 aa21.39■■□□□ 1.01
SKA3-205ENST00000465471 HDCP19113 662 aa21.39■■□□□ 1.01
SKA3-205ENST00000465471 USP4Q13107 963 aa21.39■■□□□ 1.01
SKA3-205ENST00000465471 TRIM67Q6ZTA4 783 aa21.39■■□□□ 1.01
SKA3-205ENST00000465471 GPIHBP1Q8IV16 184 aa21.39■■□□□ 1.01
SKA3-205ENST00000465471 ZNF276Q8N554 614 aa21.39■■□□□ 1.01
SKA3-205ENST00000465471 DDX1Q92499 740 aaKnown RBP21.39■■□□□ 1.01
SKA3-205ENST00000465471 NMUR1Q9HB89 426 aa21.39■■□□□ 1.01
SKA3-205ENST00000465471 NLRC4Q9NPP4 1024 aa21.39■■□□□ 1.01
SKA3-205ENST00000465471 C11orf16Q9NQ32 467 aa21.39■■□□□ 1.01
SKA3-205ENST00000465471 CYTH4Q9UIA0 394 aa21.39■■□□□ 1.01
SKA3-205ENST00000465471 A0A1W2PQH9 124 aa21.38■■□□□ 1.01
SKA3-205ENST00000465471 ARNTLO00327 626 aa21.38■■□□□ 1.01
SKA3-205ENST00000465471 COCHO43405 550 aa21.38■■□□□ 1.01
SKA3-205ENST00000465471 ZBED1O96006 694 aa21.38■■□□□ 1.01
SKA3-205ENST00000465471 CKMP06732 381 aa21.38■■□□□ 1.01
SKA3-205ENST00000465471 CYP11B1P15538 503 aa21.38■■□□□ 1.01
SKA3-205ENST00000465471 SOX5P35711 763 aa21.38■■□□□ 1.01
SKA3-205ENST00000465471 PBX1P40424 430 aa21.38■■□□□ 1.01
SKA3-205ENST00000465471 PSEN1P49768 467 aa21.38■■□□□ 1.01
SKA3-205ENST00000465471 GPC5P78333 572 aa21.38■■□□□ 1.01
SKA3-205ENST00000465471 ZXDBP98169 803 aa21.38■■□□□ 1.01
SKA3-205ENST00000465471 ADIGQ0VDE8 80 aa21.38■■□□□ 1.01
SKA3-205ENST00000465471 GRM2Q14416 872 aa21.38■■□□□ 1.01
SKA3-205ENST00000465471 ZNF77Q15935 545 aa21.38■■□□□ 1.01
SKA3-205ENST00000465471 HECTD3Q5T447 861 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms