RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 CNTN6Q9UQ52 1028 aa18.47■□□□□ 0.55
CPSF4-209ENST00000465132 SLC27A5Q9Y2P5 690 aa18.47■□□□□ 0.55
CPSF4-209ENST00000465132 DMXL1Q9Y485 3027 aa18.47■□□□□ 0.55
CPSF4-209ENST00000465132 DNAH14Q0VDD8 3507 aa18.46■□□□□ 0.55
CPSF4-209ENST00000465132 MTMR11A4FU01 709 aa18.46■□□□□ 0.55
CPSF4-209ENST00000465132 CHRNB1P11230 501 aa18.46■□□□□ 0.55
CPSF4-209ENST00000465132 RAP1GAPP47736 663 aa18.46■□□□□ 0.55
CPSF4-209ENST00000465132 NRLP54845 237 aa18.46■□□□□ 0.55
CPSF4-209ENST00000465132 FCHO2Q0JRZ9 810 aa18.46■□□□□ 0.55
CPSF4-209ENST00000465132 PPP2R5DQ14738 602 aa18.46■□□□□ 0.55
CPSF4-209ENST00000465132 STXBP5Q5T5C0 1151 aa18.46■□□□□ 0.55
CPSF4-209ENST00000465132 SCARA3Q6AZY7 606 aa18.46■□□□□ 0.55
CPSF4-209ENST00000465132 DNAJB7Q7Z6W7 309 aaPredicted RBP18.46■□□□□ 0.55
CPSF4-209ENST00000465132 SPATA2LQ8IUW3 424 aaPredicted RBP18.46■□□□□ 0.55
CPSF4-209ENST00000465132 YAF2Q8IY57 180 aa18.46■□□□□ 0.55
CPSF4-209ENST00000465132 TTC9BQ8N6N2 239 aa18.46■□□□□ 0.55
CPSF4-209ENST00000465132 B3GALNT2Q8NCR0 500 aa18.46■□□□□ 0.55
CPSF4-209ENST00000465132 MYCBPAPQ8TBZ2 947 aa18.46■□□□□ 0.55
CPSF4-209ENST00000465132 SHC3Q92529 594 aa18.46■□□□□ 0.55
CPSF4-209ENST00000465132 HEXIM2Q96MH2 286 aaKnown RBP18.46■□□□□ 0.55
CPSF4-209ENST00000465132 TMEM209Q96SK2 561 aa18.46■□□□□ 0.55
CPSF4-209ENST00000465132 GANQ9H2C0 597 aa18.46■□□□□ 0.55
CPSF4-209ENST00000465132 ASB3Q9Y575 518 aa18.46■□□□□ 0.55
CPSF4-209ENST00000465132 PCDHB5Q9Y5E4 795 aa18.46■□□□□ 0.55
CPSF4-209ENST00000465132 CEP250Q9BV73 2442 aa18.46■□□□□ 0.55
CPSF4-209ENST00000465132 CHADO15335 359 aa18.45■□□□□ 0.54
CPSF4-209ENST00000465132 VDRP11473 427 aa18.45■□□□□ 0.54
CPSF4-209ENST00000465132 PBX1P40424 430 aa18.45■□□□□ 0.54
CPSF4-209ENST00000465132 TUFMP49411 452 aaKnown RBP18.45■□□□□ 0.54
CPSF4-209ENST00000465132 CCR3P51677 355 aa18.45■□□□□ 0.54
CPSF4-209ENST00000465132 ZNF75DP51815 510 aa18.45■□□□□ 0.54
CPSF4-209ENST00000465132 GSE1Q14687 1217 aa18.45■□□□□ 0.54
CPSF4-209ENST00000465132 DRAP1Q14919 205 aaPredicted RBP18.45■□□□□ 0.54
CPSF4-209ENST00000465132 SLC39A12Q504Y0 691 aa18.45■□□□□ 0.54
CPSF4-209ENST00000465132 SGO2Q562F6 1265 aa18.45■□□□□ 0.54
CPSF4-209ENST00000465132 GAREM2Q75VX8 874 aa18.45■□□□□ 0.54
CPSF4-209ENST00000465132 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.45■□□□□ 0.54
CPSF4-209ENST00000465132 ARID3BQ8IVW6 561 aaPredicted RBP18.45■□□□□ 0.54
CPSF4-209ENST00000465132 VSTM4Q8IW00 320 aa18.45■□□□□ 0.54
CPSF4-209ENST00000465132 RBBP8NLQ8NC74 664 aaPredicted RBP18.45■□□□□ 0.54
CPSF4-209ENST00000465132 CSGALNACT1Q8TDX6 532 aa18.45■□□□□ 0.54
CPSF4-209ENST00000465132 PSMG2Q969U7 264 aa18.45■□□□□ 0.54
CPSF4-209ENST00000465132 MSANTD3Q96H12 275 aa18.45■□□□□ 0.54
CPSF4-209ENST00000465132 CEP295NLQ96MC4 621 aa18.45■□□□□ 0.54
CPSF4-209ENST00000465132 ARID3AQ99856 593 aa18.45■□□□□ 0.54
CPSF4-209ENST00000465132 NAA15Q9BXJ9 866 aaKnown RBP18.45■□□□□ 0.54
CPSF4-209ENST00000465132 GRPEL1Q9HAV7 217 aa18.45■□□□□ 0.54
CPSF4-209ENST00000465132 HESX1Q9UBX0 185 aa18.45■□□□□ 0.54
CPSF4-209ENST00000465132 LUC7L2Q9Y383 392 aaKnown RBP18.45■□□□□ 0.54
CPSF4-209ENST00000465132 FHOD1Q9Y613 1164 aa18.45■□□□□ 0.54
CPSF4-209ENST00000465132 FRYLO94915 3013 aa18.44■□□□□ 0.54
CPSF4-209ENST00000465132 SOAT2O75908 522 aa18.44■□□□□ 0.54
CPSF4-209ENST00000465132 FERP16591 822 aa18.44■□□□□ 0.54
CPSF4-209ENST00000465132 ACO1P21399 889 aaKnown RBP18.44■□□□□ 0.54
CPSF4-209ENST00000465132 GAS6Q14393 721 aa18.44■□□□□ 0.54
CPSF4-209ENST00000465132 CFAP221Q4G0U5 840 aa18.44■□□□□ 0.54
CPSF4-209ENST00000465132 FAM171BQ6P995 826 aa18.44■□□□□ 0.54
CPSF4-209ENST00000465132 C1orf228Q6PIY5 440 aa18.44■□□□□ 0.54
CPSF4-209ENST00000465132 VSTM1Q6UX27 236 aa18.44■□□□□ 0.54
CPSF4-209ENST00000465132 ACOT1Q86TX2 421 aa18.44■□□□□ 0.54
CPSF4-209ENST00000465132 GPIHBP1Q8IV16 184 aa18.44■□□□□ 0.54
CPSF4-209ENST00000465132 DRC7Q8IY82 874 aa18.44■□□□□ 0.54
CPSF4-209ENST00000465132 UBR7Q8N806 425 aa18.44■□□□□ 0.54
CPSF4-209ENST00000465132 OR10T2Q8NGX3 314 aa18.44■□□□□ 0.54
CPSF4-209ENST00000465132 KREMEN1Q96MU8 473 aa18.44■□□□□ 0.54
CPSF4-209ENST00000465132 MED10Q9BTT4 135 aa18.44■□□□□ 0.54
CPSF4-209ENST00000465132 ELOVL4Q9GZR5 314 aa18.44■□□□□ 0.54
CPSF4-209ENST00000465132 SDCBP2Q9H190 292 aa18.44■□□□□ 0.54
CPSF4-209ENST00000465132 NLRC4Q9NPP4 1024 aa18.44■□□□□ 0.54
CPSF4-209ENST00000465132 EHD2Q9NZN4 543 aa18.44■□□□□ 0.54
CPSF4-209ENST00000465132 TICRRQ7Z2Z1 1910 aa18.44■□□□□ 0.54
CPSF4-209ENST00000465132 SLC38A8A6NNN8 435 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 F8VZ95 297 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 NOL4O94818 638 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 FGF19O95750 216 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 CD19P15391 556 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 SDHBP21912 280 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 TGM1P22735 817 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 ACAT1P24752 427 aaKnown RBP18.43■□□□□ 0.54
CPSF4-209ENST00000465132 LMO2P25791 158 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 CDC25BP30305 580 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 SOX5P35711 763 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 CXCL12P48061 93 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 SOX9P48436 509 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 KPNA1P52294 538 aaPredicted RBP18.43■□□□□ 0.54
CPSF4-209ENST00000465132 RAD23BP54727 409 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 RPL10AP62906 217 aaKnown RBP18.43■□□□□ 0.54
CPSF4-209ENST00000465132 ZBED6P86452 979 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 SATB1Q01826 763 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 CYP27A1Q02318 531 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 LMNB2Q03252 620 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 MEA1Q16626 185 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 ZNF394Q53GI3 561 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 ITIH5Q86UX2 942 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 OSTM1Q86WC4 334 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 CNGA4Q8IV77 575 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 FAM71AQ8IYT1 594 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 SPEM1Q8N4L4 309 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 SYN2Q92777 582 aaPredicted RBP18.43■□□□□ 0.54
CPSF4-209ENST00000465132 LRRC3BQ96PB8 259 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms