RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 ZSWIM1Q9BR11 485 aa14.45□□□□□ -0.1
LIMD1-203ENST00000465039 TRIM62Q9BVG3 475 aa14.45□□□□□ -0.1
LIMD1-203ENST00000465039 CNGB3Q9NQW8 809 aa14.45□□□□□ -0.1
LIMD1-203ENST00000465039 ARHGAP26Q9UNA1 814 aa14.45□□□□□ -0.1
LIMD1-203ENST00000465039 DUSP12Q9UNI6 340 aa14.45□□□□□ -0.1
LIMD1-203ENST00000465039 CEP83Q9Y592 693 aa14.45□□□□□ -0.1
LIMD1-203ENST00000465039 M0QYV0 167 aa14.44□□□□□ -0.1
LIMD1-203ENST00000465039 THAP12O43422 761 aa14.44□□□□□ -0.1
LIMD1-203ENST00000465039 FBXO21O94952 628 aa14.44□□□□□ -0.1
LIMD1-203ENST00000465039 LSM8O95777 96 aaKnown RBP14.44□□□□□ -0.1
LIMD1-203ENST00000465039 SP100P23497 879 aaPredicted RBP14.44□□□□□ -0.1
LIMD1-203ENST00000465039 BRD2P25440 801 aaKnown RBP14.44□□□□□ -0.1
LIMD1-203ENST00000465039 SOX5P35711 763 aa14.44□□□□□ -0.1
LIMD1-203ENST00000465039 USP8P40818 1118 aa14.44□□□□□ -0.1
LIMD1-203ENST00000465039 STAT1P42224 750 aa14.44□□□□□ -0.1
LIMD1-203ENST00000465039 POLR2FP61218 127 aaKnown RBP14.44□□□□□ -0.1
LIMD1-203ENST00000465039 SLC7A9P82251 487 aa14.44□□□□□ -0.1
LIMD1-203ENST00000465039 FANCCQ00597 558 aa14.44□□□□□ -0.1
LIMD1-203ENST00000465039 PLCB2Q00722 1185 aa14.44□□□□□ -0.1
LIMD1-203ENST00000465039 PFKPQ01813 784 aa14.44□□□□□ -0.1
LIMD1-203ENST00000465039 APBA1Q02410 837 aa14.44□□□□□ -0.1
LIMD1-203ENST00000465039 DDX42Q86XP3 938 aaKnown RBP eCLIP14.44□□□□□ -0.1
LIMD1-203ENST00000465039 ARID3BQ8IVW6 561 aaPredicted RBP14.44□□□□□ -0.1
LIMD1-203ENST00000465039 SLC44A3Q8N4M1 653 aa14.44□□□□□ -0.1
LIMD1-203ENST00000465039 SCAMP5Q8TAC9 235 aa14.44□□□□□ -0.1
LIMD1-203ENST00000465039 EDAQ92838 391 aa14.44□□□□□ -0.1
LIMD1-203ENST00000465039 DNASE1L2Q92874 299 aa14.44□□□□□ -0.1
LIMD1-203ENST00000465039 FGF14Q92915 247 aa14.44□□□□□ -0.1
LIMD1-203ENST00000465039 PCMTD1Q96MG8 357 aaPredicted RBP14.44□□□□□ -0.1
LIMD1-203ENST00000465039 NOX5Q96PH1 765 aa14.44□□□□□ -0.1
LIMD1-203ENST00000465039 NUP58Q9BVL2 599 aa14.44□□□□□ -0.1
LIMD1-203ENST00000465039 SLC46A2Q9BY10 475 aa14.44□□□□□ -0.1
LIMD1-203ENST00000465039 LRRC4Q9HBW1 653 aa14.44□□□□□ -0.1
LIMD1-203ENST00000465039 TDP1Q9NUW8 608 aa14.44□□□□□ -0.1
LIMD1-203ENST00000465039 KIF26AQ9ULI4 1882 aaPredicted RBP14.44□□□□□ -0.1
LIMD1-203ENST00000465039 MYO10Q9HD67 2058 aa14.43□□□□□ -0.1
LIMD1-203ENST00000465039 HELZP42694 1942 aaKnown RBP14.43□□□□□ -0.1
LIMD1-203ENST00000465039 CYP26A1O43174 497 aa14.43□□□□□ -0.1
LIMD1-203ENST00000465039 CBFA2T2O43439 604 aa14.43□□□□□ -0.1
LIMD1-203ENST00000465039 ZBED1O96006 694 aa14.43□□□□□ -0.1
LIMD1-203ENST00000465039 CKMP06732 381 aa14.43□□□□□ -0.1
LIMD1-203ENST00000465039 CYP11B1P15538 503 aa14.43□□□□□ -0.1
LIMD1-203ENST00000465039 GJA1P17302 382 aa14.43□□□□□ -0.1
LIMD1-203ENST00000465039 PSMC3P17980 439 aa14.43□□□□□ -0.1
LIMD1-203ENST00000465039 CDH5P33151 784 aaPredicted RBP14.43□□□□□ -0.1
LIMD1-203ENST00000465039 CLCN1P35523 988 aa14.43□□□□□ -0.1
LIMD1-203ENST00000465039 GPD2P43304 727 aa14.43□□□□□ -0.1
LIMD1-203ENST00000465039 CDR1P51861 262 aa14.43□□□□□ -0.1
LIMD1-203ENST00000465039 MLLT6P55198 1093 aaPredicted RBP14.43□□□□□ -0.1
LIMD1-203ENST00000465039 CYP4F8P98187 520 aa14.43□□□□□ -0.1
LIMD1-203ENST00000465039 HECTD3Q5T447 861 aa14.43□□□□□ -0.1
LIMD1-203ENST00000465039 PARM1Q6UWI2 310 aa14.43□□□□□ -0.1
LIMD1-203ENST00000465039 BEND5Q7L4P6 421 aa14.43□□□□□ -0.1
LIMD1-203ENST00000465039 GPRIN1Q7Z2K8 1008 aa14.43□□□□□ -0.1
LIMD1-203ENST00000465039 MFSD6LQ8IWD5 586 aa14.43□□□□□ -0.1
LIMD1-203ENST00000465039 SIX6OS1Q8N1H7 587 aa14.43□□□□□ -0.1
LIMD1-203ENST00000465039 EPS8L1Q8TE68 723 aa14.43□□□□□ -0.1
LIMD1-203ENST00000465039 SECISBP2LQ93073 1101 aaKnown RBP14.43□□□□□ -0.1
LIMD1-203ENST00000465039 ZSWIM3Q96MP5 696 aa14.43□□□□□ -0.1
LIMD1-203ENST00000465039 NUCKS1Q9H1E3 243 aaKnown RBP14.43□□□□□ -0.1
LIMD1-203ENST00000465039 MUTYHQ9UIF7 546 aa14.43□□□□□ -0.1
LIMD1-203ENST00000465039 AJAP1Q9UKB5 411 aaPredicted RBP14.43□□□□□ -0.1
LIMD1-203ENST00000465039 MYO16Q9Y6X6 1858 aa14.43□□□□□ -0.1
LIMD1-203ENST00000465039 ITIH6Q6UXX5 1313 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 A0A1W2PQJ5 194 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 NRG2O14511 850 aaPredicted RBP14.42□□□□□ -0.1
LIMD1-203ENST00000465039 DPYSL4O14531 572 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 EPHB6O15197 1021 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 HDCP19113 662 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 KRT9P35527 623 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 PBX1P40424 430 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 TKTL1P51854 596 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 UBASH3AP57075 661 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 ZXDAP98168 799 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 SIGLEC14Q08ET2 396 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 USP4Q13107 963 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 ARHGAP29Q52LW3 1261 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 STXBP5Q5T5C0 1151 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 TXNDC8Q6A555 127 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 C1orf228Q6PIY5 440 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 TRIM72Q6ZMU5 477 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 CACNA2D4Q7Z3S7 1137 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 TMEM110Q86TL2 294 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 SLC47A2Q86VL8 602 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 MAB21L3Q8N8X9 362 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 IRF7Q92985 503 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 MSANTD3Q96H12 275 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 SLC4A5Q9BY07 1137 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 MIS12Q9H081 205 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 THG1LQ9NWX6 298 aaKnown RBP14.42□□□□□ -0.1
LIMD1-203ENST00000465039 GMIPQ9P107 970 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 WNT16Q9UBV4 365 aa14.42□□□□□ -0.1
LIMD1-203ENST00000465039 CHADO15335 359 aa14.41□□□□□ -0.1
LIMD1-203ENST00000465039 TEX33O43247 280 aa14.41□□□□□ -0.1
LIMD1-203ENST00000465039 TLR5O60602 858 aa14.41□□□□□ -0.1
LIMD1-203ENST00000465039 PRAMEF12O95522 483 aa14.41□□□□□ -0.1
LIMD1-203ENST00000465039 ASGR2P07307 311 aa14.41□□□□□ -0.1
LIMD1-203ENST00000465039 RALAP11233 206 aa14.41□□□□□ -0.1
LIMD1-203ENST00000465039 FERP16591 822 aa14.41□□□□□ -0.1
LIMD1-203ENST00000465039 ADIGQ0VDE8 80 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 192.1 ms