RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 GSCP56915 257 aaPredicted RBP12.69□□□□□ -0.38
SEC61A1-203ENST00000464451 PPARDQ03181 441 aa12.69□□□□□ -0.38
SEC61A1-203ENST00000464451 AMHR2Q16671 573 aa12.69□□□□□ -0.38
SEC61A1-203ENST00000464451 KYNUQ16719 465 aa12.69□□□□□ -0.38
SEC61A1-203ENST00000464451 PTPN20Q4JDL3 420 aa12.69□□□□□ -0.38
SEC61A1-203ENST00000464451 JADE1Q6IE81 842 aa12.69□□□□□ -0.38
SEC61A1-203ENST00000464451 HIBCHQ6NVY1 386 aaPredicted RBP12.69□□□□□ -0.38
SEC61A1-203ENST00000464451 TADA2BQ86TJ2 420 aa12.69□□□□□ -0.38
SEC61A1-203ENST00000464451 OTUD6BQ8N6M0 293 aa12.69□□□□□ -0.38
SEC61A1-203ENST00000464451 IPO4Q8TEX9 1081 aaKnown RBP12.69□□□□□ -0.38
SEC61A1-203ENST00000464451 CHMP6Q96FZ7 201 aa12.69□□□□□ -0.38
SEC61A1-203ENST00000464451 PBX4Q9BYU1 374 aa12.69□□□□□ -0.38
SEC61A1-203ENST00000464451 TSPYL2Q9H2G4 693 aaPredicted RBP12.69□□□□□ -0.38
SEC61A1-203ENST00000464451 PDZD7Q9H5P4 517 aa12.69□□□□□ -0.38
SEC61A1-203ENST00000464451 RGS18Q9NS28 235 aa12.69□□□□□ -0.38
SEC61A1-203ENST00000464451 DNPEPQ9ULA0 475 aa12.69□□□□□ -0.38
SEC61A1-203ENST00000464451 ZNF148Q9UQR1 794 aa12.69□□□□□ -0.38
SEC61A1-203ENST00000464451 EFR3BQ9Y2G0 817 aa12.69□□□□□ -0.38
SEC61A1-203ENST00000464451 TRIOBPQ9H2D6 2365 aa12.69□□□□□ -0.38
SEC61A1-203ENST00000464451 PTPRSQ13332 1948 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 LRRD1A4D1F6 860 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 EFCAB14O75071 495 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 CILPO75339 1184 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 ITGB3P05106 788 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 KRT7P08729 469 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 HOXA11P31270 313 aaPredicted RBP12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 RFC1P35251 1148 aaPredicted RBP12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 RAP1GAPP47736 663 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 GATMP50440 423 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 PSMC1P62191 440 aaKnown RBP12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 DSC3Q14574 896 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 LONRF1Q17RB8 773 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 P3H1Q32P28 736 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 LRIT3Q3SXY7 679 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 TWF2Q6IBS0 349 aaKnown RBP12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 CPLX4Q7Z7G2 160 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 ZCCHC9Q8N567 271 aaKnown RBP12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 ALLCQ8N6M5 410 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 CXorf38Q8TB03 319 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 ATXN2LQ8WWM7 1075 aaKnown RBP12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 SLC9A7Q96T83 725 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 FAM124BQ9H5Z6 455 aaPredicted RBP12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 SYNCQ9H7C4 482 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 INTS9Q9NV88 658 aaKnown RBP12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 NINJ2Q9NZG7 142 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 YBX2Q9Y2T7 364 aaKnown RBP12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 LCHNA4D1U4 455 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 GOLGA8SH3BPF8 625 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 TLL1O43897 1013 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 ITGAVP06756 1048 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 ARF4P18085 180 aaPredicted RBP12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 VCPP55072 806 aaKnown RBP12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 CDH8P55286 799 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 ZNF268Q14587 947 aaPredicted RBP12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 HADHQ16836 314 aaKnown RBP12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 GKAP1Q5VSY0 366 aaPredicted RBP12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 TXNRD3NBQ6F5E7 133 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 C6orf89Q6UWU4 347 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 SLC4A11Q8NBS3 891 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 NKD2Q969F2 451 aaPredicted RBP12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 TOP1MTQ969P6 601 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 TMEM176AQ96HP8 235 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 CCDC77Q9BR77 488 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 FRMD8P1Q9BZ68 369 aaPredicted RBP12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 SDCBP2Q9H190 292 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 CCDC134Q9H6E4 229 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 CYTH4Q9UIA0 394 aa12.68□□□□□ -0.38
SEC61A1-203ENST00000464451 MICAL3Q7RTP6 2002 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 C9IYK1 514 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 DNALI1O14645 258 aaPredicted RBP12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 GJB5O95377 273 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 FGFR1P11362 822 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 DRD4P21917 467 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 ARSEP51690 589 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 SLC25A11Q02978 314 aaKnown RBP12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 STAT4Q14765 748 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 TMEM132DQ14C87 1099 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 SLC10A6Q3KNW5 377 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 SLC24A5Q71RS6 500 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 EXOC3L1Q86VI1 746 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 XYLT1Q86Y38 959 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 NT5DC4Q86YG4 428 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 CACNA2D3Q8IZS8 1091 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 TTC39CQ8N584 583 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 PHOSPHO2Q8TCD6 241 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 ARHGEF2Q92974 986 aaKnown RBP12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 LPPQ93052 612 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 HPDLQ96IR7 371 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 SEC16BQ96JE7 1060 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 FAM161BQ96MY7 647 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 ZNF317Q96PQ6 595 aaPredicted RBP12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 CPXM1Q96SM3 734 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 RBM15Q96T37 977 aaKnown RBP eCLIP12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 EIF2AQ9BY44 585 aaKnown RBP12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 NKX2-4Q9H2Z4 354 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 SMYD3Q9H7B4 428 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 DNAJC17Q9NVM6 304 aaKnown RBP12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 ITGA11Q9UKX5 1188 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 LRFN2Q9ULH4 789 aa12.67□□□□□ -0.38
SEC61A1-203ENST00000464451 C2CD2Q9Y426 696 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms