RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 HOXD11P31277 338 aaPredicted RBP13.71□□□□□ -0.21
XRN1-203ENST00000463916 RPS9P46781 194 aaKnown RBP13.71□□□□□ -0.21
XRN1-203ENST00000463916 GAS6Q14393 721 aa13.71□□□□□ -0.21
XRN1-203ENST00000463916 NAIF1Q69YI7 327 aaPredicted RBP13.71□□□□□ -0.21
XRN1-203ENST00000463916 CC2D1AQ6P1N0 951 aaPredicted RBP13.71□□□□□ -0.21
XRN1-203ENST00000463916 RALGPS2Q86X27 583 aaPredicted RBP13.71□□□□□ -0.21
XRN1-203ENST00000463916 MLKLQ8NB16 471 aa13.71□□□□□ -0.21
XRN1-203ENST00000463916 OSCP1Q8WVF1 389 aa13.71□□□□□ -0.21
XRN1-203ENST00000463916 NUP62CLQ9H1M0 184 aa13.71□□□□□ -0.21
XRN1-203ENST00000463916 SPATA6Q9NWH7 488 aaPredicted RBP13.71□□□□□ -0.21
XRN1-203ENST00000463916 OSER1Q9NX31 292 aa13.71□□□□□ -0.21
XRN1-203ENST00000463916 DUS2Q9NX74 493 aaKnown RBP13.71□□□□□ -0.21
XRN1-203ENST00000463916 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.71□□□□□ -0.21
XRN1-203ENST00000463916 CPQQ9Y646 472 aa13.71□□□□□ -0.21
XRN1-203ENST00000463916 PATJQ8NI35 1801 aa13.71□□□□□ -0.22
XRN1-203ENST00000463916 HELZP42694 1942 aaKnown RBP13.7□□□□□ -0.22
XRN1-203ENST00000463916 RNF225M0QZC1 329 aaPredicted RBP13.7□□□□□ -0.22
XRN1-203ENST00000463916 CYP26A1O43174 497 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 TCF3P15923 654 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 PFKLP17858 780 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 MTAPQ13126 283 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 PON2Q15165 354 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 EML3Q32P44 896 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 RRAGAQ7L523 313 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 ARHGEF19Q8IW93 802 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 TTC39CQ8N584 583 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 PDZD8Q8NEN9 1154 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 OVCA2Q8WZ82 227 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 ZFRQ96KR1 1074 aaKnown RBP13.7□□□□□ -0.22
XRN1-203ENST00000463916 FBRSL1Q9HCM7 1045 aaKnown RBP13.7□□□□□ -0.22
XRN1-203ENST00000463916 COMMD8Q9NX08 183 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 TULP2O00295 520 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 NCAM2O15394 837 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 TBX18O95935 607 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 CALCAP01258 141 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 AFPP02771 609 aaKnown RBP13.7□□□□□ -0.22
XRN1-203ENST00000463916 TRIM21P19474 475 aaKnown RBP13.7□□□□□ -0.22
XRN1-203ENST00000463916 MRE11P49959 708 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 PDE6CP51160 858 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 HECTD3Q5T447 861 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 ARHGAP17Q68EM7 881 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 TTC30AQ86WT1 665 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 CREBRFQ8IUR6 639 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 PPM1KQ8N3J5 372 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 EHBP1Q8NDI1 1231 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 CNOT6LQ96LI5 555 aaKnown RBP13.7□□□□□ -0.22
XRN1-203ENST00000463916 NT5C1BQ96P26 610 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 IRF2BPLQ9H1B7 796 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 FBXO44Q9H4M3 255 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 FAM124BQ9H5Z6 455 aaPredicted RBP13.7□□□□□ -0.22
XRN1-203ENST00000463916 ECT2Q9H8V3 914 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 NMUR1Q9HB89 426 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 SCML2Q9UQR0 700 aa13.7□□□□□ -0.22
XRN1-203ENST00000463916 P4HA2O15460 535 aa13.69□□□□□ -0.22
XRN1-203ENST00000463916 SP9P0CG40 484 aa13.69□□□□□ -0.22
XRN1-203ENST00000463916 CCDC192P0DO97 292 aa13.69□□□□□ -0.22
XRN1-203ENST00000463916 KIF11P52732 1056 aa13.69□□□□□ -0.22
XRN1-203ENST00000463916 PDGFRLQ15198 375 aa13.69□□□□□ -0.22
XRN1-203ENST00000463916 WBP2Q969T9 261 aa13.69□□□□□ -0.22
XRN1-203ENST00000463916 MSANTD3Q96H12 275 aa13.69□□□□□ -0.22
XRN1-203ENST00000463916 ZSWIM1Q9BR11 485 aa13.69□□□□□ -0.22
XRN1-203ENST00000463916 CHRDQ9H2X0 955 aa13.69□□□□□ -0.22
XRN1-203ENST00000463916 PNPLA8Q9NP80 782 aa13.69□□□□□ -0.22
XRN1-203ENST00000463916 FGFR1OPO95684 399 aaKnown RBP13.68□□□□□ -0.22
XRN1-203ENST00000463916 MBL2P11226 248 aaPredicted RBP13.68□□□□□ -0.22
XRN1-203ENST00000463916 TBXAS1P24557 533 aaPredicted RBP13.68□□□□□ -0.22
XRN1-203ENST00000463916 GJA4P35212 333 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 NBL1P41271 181 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 CCINQ13939 588 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 TSSK4Q6SA08 328 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 TMEM270Q6UE05 265 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 Q6ZS52 159 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 SCD5Q86SK9 330 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 ANKRD52Q8NB46 1076 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 TFAP2BQ92481 460 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 KREMEN1Q96MU8 473 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 C2orf42Q9NWW7 574 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 CFAP97Q9P2B7 532 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 NUDT5Q9UKK9 219 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 USP3Q9Y6I4 520 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 TLR5O60602 858 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 IFNAR2P48551 515 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 APBA1Q02410 837 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 CETN1Q12798 172 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 PIGZQ86VD9 579 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 ADGRG2Q8IZP9 1017 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 GBP4Q96PP9 640 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 CRACR2AQ9BSW2 395 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 INTS2Q9H0H0 1204 aaKnown RBP13.68□□□□□ -0.22
XRN1-203ENST00000463916 TLR8Q9NR97 1041 aaKnown RBP13.68□□□□□ -0.22
XRN1-203ENST00000463916 TSPAN16Q9UKR8 245 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 R4GN57 208 aa13.68□□□□□ -0.22
XRN1-203ENST00000463916 A0A1W2PQH9 124 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 LAMTOR5O43504 91 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 CD19P15391 556 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 HOXC13P31276 330 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 MAGEA9P43362 315 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 TUBP50607 506 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 GALK1P51570 392 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 GOLGA7BQ2TAP0 167 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms