RNA–Protein interactions for RNA: ENST00000463470.1

VPS72-203, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 1 (best)

Gene VPS72, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-203ENST00000463470 ACTL9Q8TC94 416 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 PXYLP1Q8TE99 480 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 ATG4AQ8WYN0 398 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 PRCCQ92733 491 aaPredicted RBP4.91□□□□□ -1.62
VPS72-203ENST00000463470 PBXIP1Q96AQ6 731 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 ZBTB9Q96C00 473 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 KLHL29Q96CT2 875 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 RSRC1Q96IZ7 334 aaKnown RBP4.91□□□□□ -1.62
VPS72-203ENST00000463470 ACAP3Q96P50 834 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 LRRC37BQ96QE4 947 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 PCYT2Q99447 389 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 PARK7Q99497 189 aaKnown RBP4.91□□□□□ -1.62
VPS72-203ENST00000463470 MMP19Q99542 508 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 NAT9Q9BTE0 207 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 DDX23Q9BUQ8 820 aaKnown RBP4.91□□□□□ -1.62
VPS72-203ENST00000463470 NT5C1AQ9BXI3 368 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 MTMR12Q9C0I1 747 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 IQCGQ9H095 443 aaKnown RBP4.91□□□□□ -1.62
VPS72-203ENST00000463470 KLC2Q9H0B6 622 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 XYLT2Q9H1B5 865 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 XAB2Q9HCS7 855 aaKnown RBP4.91□□□□□ -1.62
VPS72-203ENST00000463470 PNPLA8Q9NP80 782 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 PAK6Q9NQU5 681 aaPredicted RBP4.91□□□□□ -1.62
VPS72-203ENST00000463470 FGFR1OP2Q9NVK5 253 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 SLC5A4Q9NY91 659 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 RCOR3Q9P2K3 495 aaPredicted RBP4.91□□□□□ -1.62
VPS72-203ENST00000463470 CTNNAL1Q9UBT7 734 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 MORF4L1Q9UBU8 362 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 HESX1Q9UBX0 185 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 PRKAG3Q9UGI9 489 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 ZNF180Q9UJW8 692 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 GJD2Q9UKL4 321 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 DNPEPQ9ULA0 475 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 ZMYND8Q9ULU4 1186 aaPredicted RBP4.91□□□□□ -1.62
VPS72-203ENST00000463470 GABRQQ9UN88 632 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.91□□□□□ -1.62
VPS72-203ENST00000463470 COLQQ9Y215 455 aaPredicted RBP4.91□□□□□ -1.62
VPS72-203ENST00000463470 MTO1Q9Y2Z2 717 aaKnown RBP4.91□□□□□ -1.62
VPS72-203ENST00000463470 IVNS1ABPQ9Y6Y0 642 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 CHD9Q3L8U1 2897 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 RLFQ13129 1914 aa4.91□□□□□ -1.62
VPS72-203ENST00000463470 KIAA0100Q14667 2235 aaKnown RBP4.91□□□□□ -1.62
VPS72-203ENST00000463470 DNAJC25-GNG10A0A024R161 153 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 CARNS1A5YM72 827 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 SOWAHBA6NEL2 793 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 HACD1B0YJ81 288 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 ANKRD65E5RJM6 399 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 F8VP50 259 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 DNM1LO00429 736 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 C2CD2LO14523 706 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 TRAFD1O14545 582 aaPredicted RBP4.9□□□□□ -1.63
VPS72-203ENST00000463470 ABLIM1O14639 778 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 KLF11O14901 512 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 MDM4O15151 490 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 GALR2O43603 387 aaPredicted RBP4.9□□□□□ -1.63
VPS72-203ENST00000463470 LRCH4O75427 683 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 UNC5CO95185 931 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 LUC7L3O95232 432 aaKnown RBP4.9□□□□□ -1.63
VPS72-203ENST00000463470 TRUB2O95900 331 aaKnown RBP4.9□□□□□ -1.63
VPS72-203ENST00000463470 CST3P01034 146 aaPredicted RBP4.9□□□□□ -1.63
VPS72-203ENST00000463470 IFNB1P01574 187 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 CD4P01730 458 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 MT-ND3P03897 115 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 RPLP2P05387 115 aaKnown RBP4.9□□□□□ -1.63
VPS72-203ENST00000463470 INHBAP08476 426 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 KRT19P08727 400 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 STAG3L1P0CL83 205 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 TXNP10599 105 aaKnown RBP4.9□□□□□ -1.63
VPS72-203ENST00000463470 RBP3P10745 1247 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 HARSP12081 509 aaKnown RBP4.9□□□□□ -1.63
VPS72-203ENST00000463470 CCL5P13501 91 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 NQO1P15559 274 aaKnown RBP4.9□□□□□ -1.63
VPS72-203ENST00000463470 TAC1P20366 129 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 PAX3P23760 479 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 BRD2P25440 801 aaKnown RBP4.9□□□□□ -1.63
VPS72-203ENST00000463470 DNAJB2P25686 324 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 AXLP30530 894 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 SDC4P31431 198 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 RFC1P35251 1148 aaPredicted RBP4.9□□□□□ -1.63
VPS72-203ENST00000463470 GJC1P36383 396 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 GCLCP48506 637 aaPredicted RBP4.9□□□□□ -1.63
VPS72-203ENST00000463470 IFNAR2P48551 515 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 VPS41P49754 854 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 ATN1P54259 1190 aaPredicted RBP4.9□□□□□ -1.63
VPS72-203ENST00000463470 RAD23BP54727 409 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 AIF1P55008 147 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 EIF3EP60228 445 aaKnown RBP4.9□□□□□ -1.63
VPS72-203ENST00000463470 RPL7AP62424 266 aaKnown RBP4.9□□□□□ -1.63
VPS72-203ENST00000463470 ELF3P78545 371 aaPredicted RBP4.9□□□□□ -1.63
VPS72-203ENST00000463470 OTUD4Q01804 1114 aaKnown RBP4.9□□□□□ -1.63
VPS72-203ENST00000463470 ROR1Q01973 937 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 CNTN2Q02246 1040 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 SLC25A11Q02978 314 aaKnown RBP4.9□□□□□ -1.63
VPS72-203ENST00000463470 MBTD1Q05BQ5 628 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 NAB1Q13506 487 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 KRT81Q14533 505 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 NOMO1Q15155 1222 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 TMED2Q15363 201 aa4.9□□□□□ -1.63
VPS72-203ENST00000463470 TRIP13Q15645 432 aaPredicted RBP4.9□□□□□ -1.63
VPS72-203ENST00000463470 TBCCQ15814 346 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms