RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 CPA6Q8N4T0 437 aa17.16■□□□□ 0.34
COL1A1-202ENST00000463440 SLC4A11Q8NBS3 891 aa17.16■□□□□ 0.34
COL1A1-202ENST00000463440 JAKMIP2Q96AA8 810 aa17.16■□□□□ 0.34
COL1A1-202ENST00000463440 NT5C1BQ96P26 610 aa17.16■□□□□ 0.34
COL1A1-202ENST00000463440 GBP4Q96PP9 640 aa17.16■□□□□ 0.34
COL1A1-202ENST00000463440 DUSP16Q9BY84 665 aa17.16■□□□□ 0.34
COL1A1-202ENST00000463440 RNF38Q9H0F5 515 aa17.16■□□□□ 0.34
COL1A1-202ENST00000463440 CHRDQ9H2X0 955 aa17.16■□□□□ 0.34
COL1A1-202ENST00000463440 GMIPQ9P107 970 aa17.16■□□□□ 0.34
COL1A1-202ENST00000463440 FBXO4Q9UKT5 387 aa17.16■□□□□ 0.34
COL1A1-202ENST00000463440 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.16■□□□□ 0.34
COL1A1-202ENST00000463440 CPQQ9Y646 472 aa17.16■□□□□ 0.34
COL1A1-202ENST00000463440 HELZP42694 1942 aaKnown RBP17.15■□□□□ 0.34
COL1A1-202ENST00000463440 ZDHHC11BP0C7U3 371 aa17.15■□□□□ 0.34
COL1A1-202ENST00000463440 CHRNB1P11230 501 aa17.15■□□□□ 0.34
COL1A1-202ENST00000463440 ACO1P21399 889 aaKnown RBP17.15■□□□□ 0.34
COL1A1-202ENST00000463440 TUBP50607 506 aa17.15■□□□□ 0.34
COL1A1-202ENST00000463440 SLC8A3P57103 927 aa17.15■□□□□ 0.34
COL1A1-202ENST00000463440 KCNH2Q12809 1159 aa17.15■□□□□ 0.34
COL1A1-202ENST00000463440 NR1H3Q13133 447 aa17.15■□□□□ 0.34
COL1A1-202ENST00000463440 PON2Q15165 354 aa17.15■□□□□ 0.34
COL1A1-202ENST00000463440 DGKKQ5KSL6 1271 aa17.15■□□□□ 0.34
COL1A1-202ENST00000463440 TXNDC11Q6PKC3 985 aa17.15■□□□□ 0.34
COL1A1-202ENST00000463440 KIAA1958Q8N8K9 716 aa17.15■□□□□ 0.34
COL1A1-202ENST00000463440 EXOC4Q96A65 974 aa17.15■□□□□ 0.34
COL1A1-202ENST00000463440 NUP62CLQ9H1M0 184 aa17.15■□□□□ 0.34
COL1A1-202ENST00000463440 ECT2Q9H8V3 914 aa17.15■□□□□ 0.34
COL1A1-202ENST00000463440 TLR8Q9NR97 1041 aaKnown RBP17.15■□□□□ 0.34
COL1A1-202ENST00000463440 SMPD4Q9NXE4 827 aa17.15■□□□□ 0.34
COL1A1-202ENST00000463440 WNT6Q9Y6F9 365 aa17.15■□□□□ 0.34
COL1A1-202ENST00000463440 PIEZO1Q92508 2521 aa17.15■□□□□ 0.34
COL1A1-202ENST00000463440 CACNA1IQ9P0X4 2223 aa17.15■□□□□ 0.34
COL1A1-202ENST00000463440 HHLA1C9JL84 531 aa17.14■□□□□ 0.33
COL1A1-202ENST00000463440 PROB1E7EW31 1015 aa17.14■□□□□ 0.33
COL1A1-202ENST00000463440 SLC9A3R1O14745 358 aaPredicted RBP17.14■□□□□ 0.33
COL1A1-202ENST00000463440 COCHO43405 550 aa17.14■□□□□ 0.33
COL1A1-202ENST00000463440 AFPP02771 609 aaKnown RBP17.14■□□□□ 0.33
COL1A1-202ENST00000463440 SP9P0CG40 484 aa17.14■□□□□ 0.33
COL1A1-202ENST00000463440 MTAPQ13126 283 aa17.14■□□□□ 0.33
COL1A1-202ENST00000463440 EML3Q32P44 896 aa17.14■□□□□ 0.33
COL1A1-202ENST00000463440 ARHGAP17Q68EM7 881 aa17.14■□□□□ 0.33
COL1A1-202ENST00000463440 GPRIN1Q7Z2K8 1008 aa17.14■□□□□ 0.33
COL1A1-202ENST00000463440 NACA2Q9H009 215 aa17.14■□□□□ 0.33
COL1A1-202ENST00000463440 SCML2Q9UQR0 700 aa17.14■□□□□ 0.33
COL1A1-202ENST00000463440 PATJQ8NI35 1801 aa17.13■□□□□ 0.33
COL1A1-202ENST00000463440 OTOL1A6NHN0 477 aaPredicted RBP17.13■□□□□ 0.33
COL1A1-202ENST00000463440 NFATC1O95644 943 aa17.13■□□□□ 0.33
COL1A1-202ENST00000463440 ZXDBP98169 803 aa17.13■□□□□ 0.33
COL1A1-202ENST00000463440 CSTF1Q05048 431 aaKnown RBP17.13■□□□□ 0.33
COL1A1-202ENST00000463440 GRSF1Q12849 480 aaKnown RBP eCLIP17.13■□□□□ 0.33
COL1A1-202ENST00000463440 PPP2R5DQ14738 602 aa17.13■□□□□ 0.33
COL1A1-202ENST00000463440 TPD52L1Q16890 204 aaPredicted RBP17.13■□□□□ 0.33
COL1A1-202ENST00000463440 ZNF528Q3MIS6 628 aa17.13■□□□□ 0.33
COL1A1-202ENST00000463440 SGO2Q562F6 1265 aa17.13■□□□□ 0.33
COL1A1-202ENST00000463440 ZC3H14Q6PJT7 736 aaKnown RBP17.13■□□□□ 0.33
COL1A1-202ENST00000463440 MAMSTRQ6ZN01 415 aa17.13■□□□□ 0.33
COL1A1-202ENST00000463440 CREBRFQ8IUR6 639 aa17.13■□□□□ 0.33
COL1A1-202ENST00000463440 MAML2Q8IZL2 1156 aaPredicted RBP17.13■□□□□ 0.33
COL1A1-202ENST00000463440 PPM1KQ8N3J5 372 aa17.13■□□□□ 0.33
COL1A1-202ENST00000463440 EHBP1Q8NDI1 1231 aa17.13■□□□□ 0.33
COL1A1-202ENST00000463440 UBXN6Q9BZV1 441 aa17.13■□□□□ 0.33
COL1A1-202ENST00000463440 CCSER2Q9H7U1 834 aa17.13■□□□□ 0.33
COL1A1-202ENST00000463440 LMBRD1Q9NUN5 540 aa17.13■□□□□ 0.33
COL1A1-202ENST00000463440 CFAP97Q9P2B7 532 aa17.13■□□□□ 0.33
COL1A1-202ENST00000463440 DACH1Q9UI36 760 aa17.13■□□□□ 0.33
COL1A1-202ENST00000463440 KIAA1257Q9ULG3 409 aa17.13■□□□□ 0.33
COL1A1-202ENST00000463440 GOLGA6L22H0YM25 854 aa17.12■□□□□ 0.33
COL1A1-202ENST00000463440 TRDMT1O14717 391 aaKnown RBP17.12■□□□□ 0.33
COL1A1-202ENST00000463440 CYP26A1O43174 497 aa17.12■□□□□ 0.33
COL1A1-202ENST00000463440 TLR5O60602 858 aa17.12■□□□□ 0.33
COL1A1-202ENST00000463440 CD19P15391 556 aa17.12■□□□□ 0.33
COL1A1-202ENST00000463440 GJA4P35212 333 aa17.12■□□□□ 0.33
COL1A1-202ENST00000463440 CCR3P51677 355 aa17.12■□□□□ 0.33
COL1A1-202ENST00000463440 KIF11P52732 1056 aa17.12■□□□□ 0.33
COL1A1-202ENST00000463440 SYNPOQ8N3V7 929 aa17.12■□□□□ 0.33
COL1A1-202ENST00000463440 UBR7Q8N806 425 aa17.12■□□□□ 0.33
COL1A1-202ENST00000463440 ANKRD52Q8NB46 1076 aa17.12■□□□□ 0.33
COL1A1-202ENST00000463440 LMO3Q8TAP4 145 aa17.12■□□□□ 0.33
COL1A1-202ENST00000463440 NKD2Q969F2 451 aaPredicted RBP17.12■□□□□ 0.33
COL1A1-202ENST00000463440 CNOT6LQ96LI5 555 aaKnown RBP17.12■□□□□ 0.33
COL1A1-202ENST00000463440 IPO9Q96P70 1041 aaKnown RBP17.12■□□□□ 0.33
COL1A1-202ENST00000463440 LINC00597Q9H2U6 94 aa17.12■□□□□ 0.33
COL1A1-202ENST00000463440 PRMT8Q9NR22 394 aaPredicted RBP17.12■□□□□ 0.33
COL1A1-202ENST00000463440 RBM12Q9NTZ6 932 aaKnown RBP17.12■□□□□ 0.33
COL1A1-202ENST00000463440 TBC1D14Q9P2M4 693 aa17.12■□□□□ 0.33
COL1A1-202ENST00000463440 HESX1Q9UBX0 185 aa17.12■□□□□ 0.33
COL1A1-202ENST00000463440 PCDHB4Q9Y5E5 795 aa17.12■□□□□ 0.33
COL1A1-202ENST00000463440 E2F8A0AVK6 867 aa17.11■□□□□ 0.33
COL1A1-202ENST00000463440 PAEPP09466 180 aa17.11■□□□□ 0.33
COL1A1-202ENST00000463440 VDRP11473 427 aa17.11■□□□□ 0.33
COL1A1-202ENST00000463440 ATP5C1P36542 298 aaKnown RBP17.11■□□□□ 0.33
COL1A1-202ENST00000463440 PSEN1P49768 467 aa17.11■□□□□ 0.33
COL1A1-202ENST00000463440 BCAT1P54687 386 aa17.11■□□□□ 0.33
COL1A1-202ENST00000463440 GCNT1Q02742 428 aa17.11■□□□□ 0.33
COL1A1-202ENST00000463440 CCINQ13939 588 aa17.11■□□□□ 0.33
COL1A1-202ENST00000463440 GOLGA7BQ2TAP0 167 aa17.11■□□□□ 0.33
COL1A1-202ENST00000463440 TMEM196Q5HYL7 178 aa17.11■□□□□ 0.33
COL1A1-202ENST00000463440 TMEM270Q6UE05 265 aa17.11■□□□□ 0.33
COL1A1-202ENST00000463440 CCDC186Q7Z3E2 898 aa17.11■□□□□ 0.33
COL1A1-202ENST00000463440 SPEM1Q8N4L4 309 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms