RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 ZNF852Q6ZMS4 543 aa13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 CCDC186Q7Z3E2 898 aa13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 ARHGEF19Q8IW93 802 aa13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 ARHGAP18Q8N392 663 aa13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 CDK5RAP1Q96SZ6 601 aaKnown RBP13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 NAT10Q9H0A0 1025 aaKnown RBP13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 IRF2BPLQ9H1B7 796 aa13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 APEX2Q9UBZ4 518 aa13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 DAAM1Q9Y4D1 1078 aa13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 TICRRQ7Z2Z1 1910 aa13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 C2orf78A6NCI8 922 aa13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 O00370 1275 aa13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 XPO1O14980 1071 aaKnown RBP13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 CD19P15391 556 aa13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 KIF11P52732 1056 aa13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 GOLGA7BQ2TAP0 167 aa13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 CC2D1AQ6P1N0 951 aaPredicted RBP13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 TADA2BQ86TJ2 420 aa13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 CREBRFQ8IUR6 639 aa13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 ARL14EPQ8N8R7 260 aaPredicted RBP13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 RBBP8NLQ8NC74 664 aaPredicted RBP13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 ST13P5Q8NFI4 369 aaPredicted RBP13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 SCAMP5Q8TAC9 235 aa13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 USP3Q9Y6I4 520 aa13.79□□□□□ -0.2
R3HDM1-213ENST00000463230 NCAM2O15394 837 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 MYL5Q02045 173 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 CNGA2Q16280 664 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 KLHL40Q2TBA0 621 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 RAB41Q5JT25 222 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 MIIPQ5JXC2 388 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 KLHDC10Q6PID8 442 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 TPRG1Q6ZUI0 275 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 RALGPS2Q86X27 583 aaPredicted RBP13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 SCML4Q8N228 414 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 ANKRD20A12PQ8NF67 263 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 FLCNQ8NFG4 579 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 PJA1Q8NG27 643 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 KREMEN1Q96MU8 473 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 LRRC3BQ96PB8 259 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 FAM83CQ9BQN1 747 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 BPIFA3Q9BQP9 254 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 IER2Q9BTL4 223 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 UBE2TQ9NPD8 197 aaPredicted RBP13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 GMIPQ9P107 970 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 TMEM63CQ9P1W3 806 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 TSPAN16Q9UKR8 245 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 MIA3Q5JRA6 1907 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 SLC9A3R1O14745 358 aaPredicted RBP13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 PON1P27169 355 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 PLA2G4AP47712 749 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 TYRO3Q06418 890 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 MTF1Q14872 753 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 ITPRIPL2Q3MIP1 535 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 RRAGAQ7L523 313 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 SH3RF2Q8TEC5 729 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 KCTD13Q8WZ19 329 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 EXOC4Q96A65 974 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 LTB4R2Q9NPC1 389 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 CYLDQ9NQC7 956 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 SAMSN1Q9NSI8 373 aaKnown RBP13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 CLIC5Q9NZA1 410 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 CCL26Q9Y258 94 aa13.78□□□□□ -0.2
R3HDM1-213ENST00000463230 MED7O43513 233 aa13.77□□□□□ -0.21
R3HDM1-213ENST00000463230 VCPP55072 806 aaKnown RBP13.77□□□□□ -0.21
R3HDM1-213ENST00000463230 AMPD2Q01433 879 aa13.77□□□□□ -0.21
R3HDM1-213ENST00000463230 IFRD2Q12894 506 aaPredicted RBP13.77□□□□□ -0.21
R3HDM1-213ENST00000463230 PKDCCQ504Y2 493 aa13.77□□□□□ -0.21
R3HDM1-213ENST00000463230 TTC30AQ86WT1 665 aa13.77□□□□□ -0.21
R3HDM1-213ENST00000463230 CCDC105Q8IYK2 499 aa13.77□□□□□ -0.21
R3HDM1-213ENST00000463230 TMEM105Q8N8V8 129 aa13.77□□□□□ -0.21
R3HDM1-213ENST00000463230 OSCP1Q8WVF1 389 aa13.77□□□□□ -0.21
R3HDM1-213ENST00000463230 KAT5Q92993 513 aa13.77□□□□□ -0.21
R3HDM1-213ENST00000463230 SLC22A12Q96S37 553 aa13.77□□□□□ -0.21
R3HDM1-213ENST00000463230 SMG9Q9H0W8 520 aaKnown RBP13.77□□□□□ -0.21
R3HDM1-213ENST00000463230 HEBP1Q9NRV9 189 aa13.77□□□□□ -0.21
R3HDM1-213ENST00000463230 SIT1Q9Y3P8 196 aa13.77□□□□□ -0.21
R3HDM1-213ENST00000463230 PIAS3Q9Y6X2 628 aa13.77□□□□□ -0.21
R3HDM1-213ENST00000463230 GALR2O43603 387 aaPredicted RBP13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 C11orf57Q6ZUT1 292 aaPredicted RBP13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 GPRIN1Q7Z2K8 1008 aa13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 PIGZQ86VD9 579 aa13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 CPA6Q8N4T0 437 aa13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 SHC3Q92529 594 aa13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 ATP2A3Q93084 1043 aa13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 CYP2S1Q96SQ9 504 aa13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 CRACR2AQ9BSW2 395 aa13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 GKN1Q9NS71 199 aa13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 ZDBF2Q9HCK1 2354 aa13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 E2F8A0AVK6 867 aa13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 COCHO43405 550 aa13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 ABL1P00519 1130 aa13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 MBL2P11226 248 aaPredicted RBP13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 RALAP11233 206 aa13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 SLC9A1P19634 815 aa13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 RPS9P46781 194 aaKnown RBP13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 IFNAR2P48551 515 aa13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 KPNA1P52294 538 aaPredicted RBP13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 PM20D1Q6GTS8 502 aa13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 CAVIN1Q6NZI2 390 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms