RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 FUCA2Q9BTY2 467 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 CCSER1Q9C0I3 900 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 SPATC1LQ9H0A9 340 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 ADAM7Q9H2U9 754 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 TTC12Q9H892 705 aaPredicted RBP8.13□□□□□ -1.11
UBE4B-204ENST00000462658 KCNMB3Q9NPA1 279 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 PARD6AQ9NPB6 346 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 KCMF1Q9P0J7 381 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 LRWD1Q9UFC0 647 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 FBXO40Q9UH90 709 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 ABT1Q9ULW3 272 aaKnown RBP8.13□□□□□ -1.11
UBE4B-204ENST00000462658 PCDHA12Q9UN75 941 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 CASP8AP2Q9UKL3 1982 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 SMCHD1A6NHR9 2005 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 RLFQ13129 1914 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 IGLV3-22A0A075B6J6 115 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 BTBD19C9JJ37 291 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 PDHXO00330 501 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 MSH4O15457 936 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 B4GALT3O60512 393 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 OPHN1O60890 802 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 MAFO75444 373 aaPredicted RBP8.12□□□□□ -1.11
UBE4B-204ENST00000462658 SLC25A27O95847 323 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 LPLP06858 475 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 PFKMP08237 780 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 PNOCQ13519 176 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 USP10Q14694 798 aaKnown RBP8.12□□□□□ -1.11
UBE4B-204ENST00000462658 KARSQ15046 597 aaKnown RBP8.12□□□□□ -1.11
UBE4B-204ENST00000462658 PGM5Q15124 567 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 DGKDQ16760 1214 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 CEP55Q53EZ4 464 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 L1TD1Q5T7N2 865 aaKnown RBP8.12□□□□□ -1.11
UBE4B-204ENST00000462658 RRAGBQ5VZM2 374 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 ANKRD23Q86SG2 305 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 RASAL3Q86YV0 1011 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 ANKRD35Q8N283 1001 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 RASSF8Q8NHQ8 419 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 ETNPPLQ8TBG4 499 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 BRI3BPQ8WY22 251 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 GJA10Q969M2 543 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 LENG9Q96B70 501 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 CALML4Q96GE6 196 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 UIMC1Q96RL1 719 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 MXRA8Q9BRK3 442 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 MOV10L1Q9BXT6 1211 aaKnown RBP8.12□□□□□ -1.11
UBE4B-204ENST00000462658 PITHD1Q9GZP4 211 aaPredicted RBP8.12□□□□□ -1.11
UBE4B-204ENST00000462658 A1CFQ9NQ94 594 aaKnown RBP8.12□□□□□ -1.11
UBE4B-204ENST00000462658 PXMP2Q9NR77 195 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 CYP39A1Q9NYL5 469 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 SAE1Q9UBE0 346 aaPredicted RBP8.12□□□□□ -1.11
UBE4B-204ENST00000462658 DNAI1Q9UI46 699 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 TMPRSS11EQ9UL52 423 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 USP18Q9UMW8 372 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 SLC45A1Q9Y2W3 748 aa8.12□□□□□ -1.11
UBE4B-204ENST00000462658 FRMPD4Q14CM0 1322 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 HTTP42858 3142 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 A0A0A6YYJ9 748 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 B4GALT4O60513 344 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 INHBBP09529 407 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 ARP10275 920 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 HSPA8P11142 646 aaKnown RBP8.11□□□□□ -1.11
UBE4B-204ENST00000462658 MYCLP12524 364 aaPredicted RBP8.11□□□□□ -1.11
UBE4B-204ENST00000462658 COPB2P35606 906 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 STAT6P42226 847 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 MRE11P49959 708 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 ERVK-21P61565 698 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 SETQ01105 290 aaPredicted RBP8.11□□□□□ -1.11
UBE4B-204ENST00000462658 FZD5Q13467 585 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 MTMR1Q13613 665 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 POSTNQ15063 836 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 PCOLCEQ15113 449 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 ZRSR1Q15695 479 aaKnown RBP8.11□□□□□ -1.11
UBE4B-204ENST00000462658 PITRM1Q5JRX3 1037 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 KRT79Q5XKE5 535 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 TRIM68Q6AZZ1 485 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 RGMBQ6NW40 437 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 XRRA1Q6P2D8 792 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 NIPA1Q7RTP0 329 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 NECAB2Q7Z6G3 386 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 FAM124AQ86V42 546 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 GRAMD1CQ8IYS0 662 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 IL31RAQ8NI17 732 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 NSUN6Q8TEA1 469 aaKnown RBP8.11□□□□□ -1.11
UBE4B-204ENST00000462658 SMCR8Q8TEV9 937 aaPredicted RBP8.11□□□□□ -1.11
UBE4B-204ENST00000462658 LMBR1Q8WVP7 490 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 PAGE5Q96GU1 130 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 DYDC2Q96IM9 177 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 PLIN2Q99541 437 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 PDCD2LQ9BRP1 358 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 MMTAG2Q9BU76 263 aaKnown RBP8.11□□□□□ -1.11
UBE4B-204ENST00000462658 GRPEL1Q9HAV7 217 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 TXNRD2Q9NNW7 524 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 KCNG1Q9UIX4 513 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 EDARQ9UNE0 448 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 INVSQ9Y283 1065 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 UBIAD1Q9Y5Z9 338 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 LOC285556D6RIA3 1793 aa8.11□□□□□ -1.11
UBE4B-204ENST00000462658 PARP14Q460N5 1801 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 PFASO15067 1338 aa8.1□□□□□ -1.11
UBE4B-204ENST00000462658 MYH7BA7E2Y1 1941 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms