RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 FAM186AA6NE01 2351 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 ATG2BQ96BY7 2078 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 RALGAPA1Q6GYQ0 2036 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 FAM237AA0A1B0GTK4 181 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 TADA3O75528 432 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 RPP40O75818 363 aaKnown RBP9.38□□□□□ -0.91
LDB1-203ENST00000461873 AKAP3O75969 853 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 RHOBTB1O94844 696 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 PAPSS2O95340 614 aaPredicted RBP9.38□□□□□ -0.91
LDB1-203ENST00000461873 ASS1P00966 412 aaKnown RBP9.38□□□□□ -0.91
LDB1-203ENST00000461873 EGFP01133 1207 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 RETP07949 1114 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 TRIM49P0CI25 452 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 TRIM49CP0CI26 452 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 CCDC130P13994 396 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 TCF3P15923 654 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 GBP1P32455 592 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 ATP5C1P36542 298 aaKnown RBP9.38□□□□□ -0.91
LDB1-203ENST00000461873 MXI1P50539 228 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 SEC13P55735 322 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 USP46P62068 366 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 FKBP3Q00688 224 aaKnown RBP9.38□□□□□ -0.91
LDB1-203ENST00000461873 GAD2Q05329 585 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 PNOCQ13519 176 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 ELF2Q15723 593 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 ANO4Q32M45 955 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 EML3Q32P44 896 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 ZNF658Q5TYW1 1059 aaPredicted RBP9.38□□□□□ -0.91
LDB1-203ENST00000461873 SPOPLQ6IQ16 392 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 SDE2Q6IQ49 451 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 FSTL4Q6MZW2 842 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 C11orf74Q86VG3 221 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 KIAA1958Q8N8K9 716 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 FBXL13Q8NEE6 735 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 TSTD1Q8NFU3 115 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 OTUB2Q96DC9 234 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 XPO6Q96QU8 1125 aaKnown RBP9.38□□□□□ -0.91
LDB1-203ENST00000461873 SLC22A12Q96S37 553 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 CDK5RAP1Q96SZ6 601 aaKnown RBP9.38□□□□□ -0.91
LDB1-203ENST00000461873 KCNK16Q96T55 309 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 PNKPQ96T60 521 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 BCCIPQ9P287 314 aaKnown RBP eCLIP9.38□□□□□ -0.91
LDB1-203ENST00000461873 ZDHHC9Q9Y397 364 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 GREB1Q4ZG55 1949 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 ANAPC1Q9H1A4 1944 aa9.38□□□□□ -0.91
LDB1-203ENST00000461873 PTPRDP23468 1912 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 DMDP11532 3685 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 RIF1Q5UIP0 2472 aaKnown RBP9.37□□□□□ -0.91
LDB1-203ENST00000461873 CCDC163A0A0D9SF12 145 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 E2F8A0AVK6 867 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 AXIN1O15169 862 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 TLR5O60602 858 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 LRP3O75074 770 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 VNN1O95497 513 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 APBB3O95704 486 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 IRF1P10914 325 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 ADH5P11766 374 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 ACO1P21399 889 aaKnown RBP9.37□□□□□ -0.91
LDB1-203ENST00000461873 PSEN1P49768 467 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 TUBP50607 506 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 DGKEP52429 567 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 SPEM2Q0P670 501 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 ORC1Q13415 861 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 BYSLQ13895 437 aaKnown RBP9.37□□□□□ -0.91
LDB1-203ENST00000461873 DHCR24Q15392 516 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 CCDC40Q4G0X9 1142 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 ZNF394Q53GI3 561 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 USP39Q53GS9 565 aaKnown RBP9.37□□□□□ -0.91
LDB1-203ENST00000461873 C2orf27AQ580R0 203 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 RSRC2Q7L4I2 434 aaKnown RBP9.37□□□□□ -0.91
LDB1-203ENST00000461873 TRMT11Q7Z4G4 463 aaKnown RBP9.37□□□□□ -0.91
LDB1-203ENST00000461873 WDR5BQ86VZ2 330 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 ZNF687Q8N1G0 1237 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 CRYBG2Q8N1P7 616 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 PGBD3Q8N328 593 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 ARHGAP18Q8N392 663 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 SCAMP5Q8TAC9 235 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 PLEKHO2Q8TD55 490 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 NELL1Q92832 810 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 CHFRQ96EP1 664 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 FAXDC2Q96IV6 333 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 CHAMP1Q96JM3 812 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 RNF38Q9H0F5 515 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 LINC00597Q9H2U6 94 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 METTL14Q9HCE5 456 aaKnown RBP9.37□□□□□ -0.91
LDB1-203ENST00000461873 POLMQ9NP87 494 aaPredicted RBP9.37□□□□□ -0.91
LDB1-203ENST00000461873 RAB20Q9NX57 234 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 GMIPQ9P107 970 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 HESX1Q9UBX0 185 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 PCDHA5Q9Y5H7 936 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 CFAP54Q96N23 3096 aa9.37□□□□□ -0.91
LDB1-203ENST00000461873 HELZP42694 1942 aaKnown RBP9.37□□□□□ -0.91
LDB1-203ENST00000461873 BICDL2A1A5D9 508 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 TBC1D3BA6NDS4 549 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 SHISA7A6NL88 538 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 SLC16A3O15427 465 aaKnown RBP9.36□□□□□ -0.91
LDB1-203ENST00000461873 MAP3K13O43283 966 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 COCHO43405 550 aa9.36□□□□□ -0.91
LDB1-203ENST00000461873 FGFR1OPO95684 399 aaKnown RBP9.36□□□□□ -0.91
LDB1-203ENST00000461873 OAS1P00973 400 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms