RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 ADIGQ0VDE8 80 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 PUS10Q3MIT2 529 aaKnown RBP11.87□□□□□ -0.51
SSBP1-202ENST00000461433 CCDC186Q7Z3E2 898 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 SLC30A5Q8TAD4 765 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 ATXN2LQ8WWM7 1075 aaKnown RBP11.87□□□□□ -0.51
SSBP1-202ENST00000461433 NDRG1Q92597 394 aaKnown RBP11.87□□□□□ -0.51
SSBP1-202ENST00000461433 CPXM1Q96SM3 734 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 FBXO44Q9H4M3 255 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 NMUR1Q9HB89 426 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 CYLDQ9NQC7 956 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 ABHD10Q9NUJ1 306 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 EHD2Q9NZN4 543 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 ARHGAP20Q9P2F6 1191 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 UXTQ9UBK9 157 aaPredicted RBP11.87□□□□□ -0.51
SSBP1-202ENST00000461433 CHORDC1Q9UHD1 332 aaPredicted RBP11.87□□□□□ -0.51
SSBP1-202ENST00000461433 SCML2Q9UQR0 700 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 MRPS23Q9Y3D9 190 aaKnown RBP11.87□□□□□ -0.51
SSBP1-202ENST00000461433 UNC80Q8N2C7 3258 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 FAM170AA1A519 330 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 ZNF840PA6NDX5 716 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 E5RJQ4 531 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 ZNF197O14709 1029 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 FGF19O95750 216 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 LSM8O95777 96 aaKnown RBP11.87□□□□□ -0.51
SSBP1-202ENST00000461433 SERPING1P05155 500 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 USP17L7P0C7H9 530 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 LCP1P13796 627 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 CYP4F8P98187 520 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 TEAD2Q15562 447 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 PTPN20Q4JDL3 420 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 STXBP5Q5T5C0 1151 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 SNX30Q5VWJ9 437 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.87□□□□□ -0.51
SSBP1-202ENST00000461433 SCD5Q86SK9 330 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 SCUBE3Q8IX30 993 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 NPAS3Q8IXF0 933 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 DRC7Q8IY82 874 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 SCML4Q8N228 414 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 TMEM35BQ8NCS4 154 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 CLEC4CQ8WTT0 213 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 CPA5Q8WXQ8 436 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 ING5Q8WYH8 240 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 FGF13Q92913 245 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 FBXO32Q969P5 355 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 PPP1R13BQ96KQ4 1090 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 MYADMQ96S97 322 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 ULBP1Q9BZM6 244 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 PDCL3Q9H2J4 239 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 ATXN3LQ9H3M9 355 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 LRRC4Q9HBW1 653 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 OSER1Q9NX31 292 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 GMIPQ9P107 970 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 NCANO14594 1321 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 DDX3XO00571 662 aaKnown RBP eCLIP11.86□□□□□ -0.517e-9■□□□□ 11
SSBP1-202ENST00000461433 PAPSS1O43252 624 aaPredicted RBP11.86□□□□□ -0.51
SSBP1-202ENST00000461433 ZBED1O96006 694 aa11.86□□□□□ -0.51
SSBP1-202ENST00000461433 ERBB2P04626 1255 aa11.86□□□□□ -0.51
SSBP1-202ENST00000461433 TPM1P09493 284 aa11.86□□□□□ -0.51
SSBP1-202ENST00000461433 BMP1P13497 986 aa11.86□□□□□ -0.51
SSBP1-202ENST00000461433 CDC25CP30307 473 aa11.86□□□□□ -0.51
SSBP1-202ENST00000461433 GABRB2P47870 512 aa11.86□□□□□ -0.51
SSBP1-202ENST00000461433 DAOAP59103 153 aa11.86□□□□□ -0.51
SSBP1-202ENST00000461433 MRPS5P82675 430 aaKnown RBP11.86□□□□□ -0.51
SSBP1-202ENST00000461433 PTP4A2Q12974 167 aa11.86□□□□□ -0.51
SSBP1-202ENST00000461433 GSE1Q14687 1217 aa11.86□□□□□ -0.51
SSBP1-202ENST00000461433 CLEC16AQ2KHT3 1053 aa11.86□□□□□ -0.51
SSBP1-202ENST00000461433 AAK1Q2M2I8 961 aa11.86□□□□□ -0.51
SSBP1-202ENST00000461433 NAA35Q5VZE5 725 aa11.86□□□□□ -0.51
SSBP1-202ENST00000461433 TRIM72Q6ZMU5 477 aa11.86□□□□□ -0.51
SSBP1-202ENST00000461433 GET4Q7L5D6 327 aaPredicted RBP11.86□□□□□ -0.51
SSBP1-202ENST00000461433 CNGA4Q8IV77 575 aa11.86□□□□□ -0.51
SSBP1-202ENST00000461433 OVCA2Q8WZ82 227 aa11.86□□□□□ -0.51
SSBP1-202ENST00000461433 ZSWIM3Q96MP5 696 aa11.86□□□□□ -0.51
SSBP1-202ENST00000461433 SLITRK1Q96PX8 696 aa11.86□□□□□ -0.51
SSBP1-202ENST00000461433 ASB2Q96Q27 587 aa11.86□□□□□ -0.51
SSBP1-202ENST00000461433 PHF7Q9BWX1 381 aaPredicted RBP11.86□□□□□ -0.51
SSBP1-202ENST00000461433 CNGB3Q9NQW8 809 aa11.86□□□□□ -0.51
SSBP1-202ENST00000461433 ST7Q9NRC1 585 aa11.86□□□□□ -0.51
SSBP1-202ENST00000461433 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.86□□□□□ -0.51
SSBP1-202ENST00000461433 BZW2Q9Y6E2 419 aaKnown RBP11.86□□□□□ -0.51
SSBP1-202ENST00000461433 TCF20Q9UGU0 1960 aaKnown RBP11.86□□□□□ -0.51
SSBP1-202ENST00000461433 C2orf78A6NCI8 922 aa11.85□□□□□ -0.51
SSBP1-202ENST00000461433 YJEFN3A6XGL0 299 aa11.85□□□□□ -0.51
SSBP1-202ENST00000461433 E7ENQ6 273 aa11.85□□□□□ -0.51
SSBP1-202ENST00000461433 TNFAIP3P21580 790 aa11.85□□□□□ -0.51
SSBP1-202ENST00000461433 ACADSBP45954 432 aa11.85□□□□□ -0.51
SSBP1-202ENST00000461433 PPP3CCP48454 512 aa11.85□□□□□ -0.51
SSBP1-202ENST00000461433 CENPCQ03188 943 aa11.85□□□□□ -0.51
SSBP1-202ENST00000461433 ASTE1Q2TB18 679 aaPredicted RBP11.85□□□□□ -0.51
SSBP1-202ENST00000461433 TXNDC8Q6A555 127 aa11.85□□□□□ -0.51
SSBP1-202ENST00000461433 MON1AQ86VX9 555 aa11.85□□□□□ -0.51
SSBP1-202ENST00000461433 SPC24Q8NBT2 197 aa11.85□□□□□ -0.51
SSBP1-202ENST00000461433 PDZD8Q8NEN9 1154 aa11.85□□□□□ -0.51
SSBP1-202ENST00000461433 PIWIL1Q96J94 861 aaKnown RBP11.85□□□□□ -0.51
SSBP1-202ENST00000461433 SLC22A12Q96S37 553 aa11.85□□□□□ -0.51
SSBP1-202ENST00000461433 CHP1Q99653 195 aa11.85□□□□□ -0.51
SSBP1-202ENST00000461433 SLC46A2Q9BY10 475 aa11.85□□□□□ -0.51
SSBP1-202ENST00000461433 MIS12Q9H081 205 aa11.85□□□□□ -0.51
SSBP1-202ENST00000461433 TAS2R14Q9NYV8 317 aa11.85□□□□□ -0.51
SSBP1-202ENST00000461433 TRPM5Q9NZQ8 1165 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms