RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 GARTP22102 1010 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 DPYDQ12882 1025 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 CASP12Q6UXS9 341 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 PEG10Q86TG7 708 aaKnown RBP9.29□□□□□ -0.92
BRCA1-205ENST00000461221 CDH24Q86UP0 819 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 POMGNT2Q8NAT1 580 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 ENKURQ8TC29 256 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 BLOC1S5Q8TDH9 187 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 SGF29Q96ES7 293 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 CLPBQ9H078 707 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 RERGLQ9H628 205 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 POLG2Q9UHN1 485 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 IPPQ9Y573 584 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 IGSF9BQ9UPX0 1349 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 KIAA0556O60303 1618 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 RRN3P2A6NIE6 340 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 FAM196BA6NMK8 535 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 GRAP2O75791 330 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 ASS1P00966 412 aaKnown RBP9.28□□□□□ -0.92
BRCA1-205ENST00000461221 GTF2H1P32780 548 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 PDK2Q15119 407 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 ZNF57Q68EA5 555 aaPredicted RBP9.28□□□□□ -0.92
BRCA1-205ENST00000461221 PMF1Q6P1K2 205 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 NOTUMQ6P988 496 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 MTSS1LQ765P7 747 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 BNIPLQ7Z465 357 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 LRRC71Q8N4P6 559 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 SETD9Q8NE22 299 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 PIK3R5Q8WYR1 880 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 ANKRD27Q96NW4 1050 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 TEX13BQ9BXU2 312 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 LRRC40Q9H9A6 602 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 NARFQ9UHQ1 456 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 CPDO75976 1380 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 ADGRL2O95490 1459 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 GNG14A0A1W2PPG7 69 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 PRAMEF22A3QJZ6 481 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 SDR42E2A6NKP2 422 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 CRTAMO95727 393 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 BCL10O95999 233 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 EPHB2P29323 1055 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 IRAK1P51617 712 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 IL5RAQ01344 420 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 CPSF1Q10570 1443 aaKnown RBP9.28□□□□□ -0.92
BRCA1-205ENST00000461221 TRAF2Q12933 501 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 DNAJC3Q13217 504 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 FAM98BQ52LJ0 330 aaKnown RBP9.28□□□□□ -0.92
BRCA1-205ENST00000461221 METTL16Q86W50 562 aaKnown RBP9.28□□□□□ -0.92
BRCA1-205ENST00000461221 LRRC49Q8IUZ0 686 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 CEP44Q9C0F1 390 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 WDCPQ9H6R7 721 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.28□□□□□ -0.92
BRCA1-205ENST00000461221 STARD13Q9Y3M8 1113 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 PCDHB7Q9Y5E2 793 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 ALG6Q9Y672 507 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 NR5A2O00482 541 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 CTSHP09668 335 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 ZNF24P17028 368 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 AVPR1AP37288 418 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 STAT5AP42229 794 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 OR1G1P47890 313 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 DGKDQ16760 1214 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 IRAK1BP1Q5VVH5 260 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 CYB5D1Q6P9G0 228 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 LRRC6Q86X45 466 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 AHI1Q8N157 1196 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 SPIRE2Q8WWL2 714 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 PARK7Q99497 189 aaKnown RBP9.28□□□□□ -0.92
BRCA1-205ENST00000461221 CHP1Q99653 195 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 APOL4Q9BPW4 351 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 COLEC11Q9BWP8 271 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 DCLRE1BQ9H816 532 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 RPS6KL1Q9Y6S9 549 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 SYNMO15061 1565 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 KDM6AO15550 1401 aaPredicted RBP9.28□□□□□ -0.92
BRCA1-205ENST00000461221 TBKBP1A7MCY6 615 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 TMEM114B3SHH9 223 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 PMPCBO75439 489 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 S100A9P06702 114 aaKnown RBP9.28□□□□□ -0.92
BRCA1-205ENST00000461221 PCNAP12004 261 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 AKAP5P24588 427 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 PSMB9P28065 219 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 CORO7P57737 925 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 VAC14Q08AM6 782 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 KLHL17Q6TDP4 642 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 ZBTB49Q6ZSB9 765 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 DENND6AQ8IWF6 608 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 CACTIN-AS1Q8N1I8 211 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 UXS1Q8NBZ7 420 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 STK39Q9UEW8 545 aa9.28□□□□□ -0.92
BRCA1-205ENST00000461221 F9P00740 461 aa9.27□□□□□ -0.92
BRCA1-205ENST00000461221 FAM58BPP0C7Q3 252 aa9.27□□□□□ -0.92
BRCA1-205ENST00000461221 HNRNPH1P31943 449 aaKnown RBP9.27□□□□□ -0.92
BRCA1-205ENST00000461221 SLC29A2Q14542 456 aa9.27□□□□□ -0.92
BRCA1-205ENST00000461221 KLHL12Q53G59 568 aa9.27□□□□□ -0.92
BRCA1-205ENST00000461221 ATAD3BQ5T9A4 648 aa9.27□□□□□ -0.92
BRCA1-205ENST00000461221 LRRC34Q8IZ02 419 aa9.27□□□□□ -0.92
BRCA1-205ENST00000461221 MIER2Q8N344 545 aa9.27□□□□□ -0.92
BRCA1-205ENST00000461221 PIGBQ92521 554 aa9.27□□□□□ -0.92
BRCA1-205ENST00000461221 KCNB2Q92953 911 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms