RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 SCINQ9Y6U3 715 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 PTPRSQ13332 1948 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 SLC38A8A6NNN8 435 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 ARHGAP6O43182 974 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 PAPLNO95428 1278 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 SKILP12757 684 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 KIF11P52732 1056 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 NOMO3P69849 1222 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 FMO1Q01740 532 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 GOLGA8FQ08AF8 430 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 GOLGA8DPQ0D2H9 430 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 MTA1Q13330 715 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 ZNF268Q14587 947 aaPredicted RBP11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 COL19A1Q14993 1142 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 CCDC122Q5T0U0 273 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 DMRTA1Q5VZB9 504 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 NAA35Q5VZE5 725 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 HGSNATQ68CP4 663 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 DENND1BQ6P3S1 775 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 ALKBH5Q6P6C2 394 aaKnown RBP11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 Q7L0L9 218 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 PHF13Q86YI8 300 aaPredicted RBP11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 PASD1Q8IV76 773 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 GIPC2Q8TF65 315 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 CTNNBL1Q8WYA6 563 aaPredicted RBP11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 FBXO32Q969P5 355 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 SMOQ99835 787 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 NCAPGQ9BPX3 1015 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 CORO1BQ9BR76 489 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 TTLL2Q9BWV7 592 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 SLC4A5Q9BY07 1137 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 NACA2Q9H009 215 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 OLA1Q9NTK5 396 aaKnown RBP11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 PARVAQ9NVD7 372 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 ASNSD1Q9NWL6 643 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 RRN3Q9NYV6 651 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 PLA2G2EQ9NZK7 142 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 CD207Q9UJ71 328 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 SCML2Q9UQR0 700 aa11.59□□□□□ -0.55
SMNDC1-203ENST00000460483 CAPN9O14815 690 aa11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 CCL16O15467 120 aa11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 UNGP13051 313 aaPredicted RBP11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 LCP1P13796 627 aa11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 ATF6P18850 670 aa11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 MMP8P22894 467 aa11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 EIF4A3P38919 411 aaKnown RBP11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 RPL34P49207 117 aaKnown RBP11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 TUBP50607 506 aa11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 KPNA1P52294 538 aaPredicted RBP11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 RAB41Q5JT25 222 aa11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 RARS2Q5T160 578 aaKnown RBP11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 PM20D1Q6GTS8 502 aa11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 TMC5Q6UXY8 1006 aa11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 BEND5Q7L4P6 421 aa11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 ZNF571Q7Z3V5 609 aaPredicted RBP11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 RNF139Q8WU17 664 aa11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 SLC20A1Q8WUM9 679 aa11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 ACSF2Q96CM8 615 aaPredicted RBP11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 GUCD1Q96NT3 240 aa11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 ACP6Q9NPH0 428 aa11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 ABCC13Q9NSE7 274 aa11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 CLIC5Q9NZA1 410 aa11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 IL37Q9NZH6 218 aa11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 ARHGAP20Q9P2F6 1191 aa11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 NAGPAQ9UK23 515 aa11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 INTUQ9ULD6 942 aa11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 MRPS23Q9Y3D9 190 aaKnown RBP11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 PAXBP1Q9Y5B6 917 aa11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 EPN1Q9Y6I3 576 aaPredicted RBP11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 USP3Q9Y6I4 520 aa11.58□□□□□ -0.56
SMNDC1-203ENST00000460483 FAM92AA1XBS5 289 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 TK2O00142 265 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 TNFRSF10BO14763 440 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 HSF2BPO75031 334 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 RFPL2O75678 378 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 FTLP02792 175 aaPredicted RBP11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 RHOP08100 348 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 H2AFZP0C0S5 128 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 FECHP22830 423 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 FSHRP23945 695 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 GABRB2P47870 512 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 RGS7P49802 495 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 EPHA5P54756 1037 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 YWHAZP63104 245 aaKnown RBP11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 GPC5P78333 572 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 MRPS5P82675 430 aaKnown RBP11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 ADIGQ0VDE8 80 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 IFRD2Q12894 506 aaPredicted RBP11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 TAF10Q12962 218 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 CCDC85BQ15834 202 aaPredicted RBP11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 IFI16Q16666 785 aaKnown RBP11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 BTBD8Q5XKL5 378 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 OR6B2Q6IFH4 312 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 PMF1Q6P1K2 205 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 WDR59Q6PJI9 974 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 H2AFVQ71UI9 128 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 RSRC2Q7L4I2 434 aaKnown RBP11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 ARCQ7LC44 396 aa11.57□□□□□ -0.56
SMNDC1-203ENST00000460483 LRRC8AQ8IWT6 810 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms