RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 ATP2A3Q93084 1043 aa24.31■■□□□ 1.48
PTPN4-208ENST00000460289 EXOC4Q96A65 974 aa24.31■■□□□ 1.48
PTPN4-208ENST00000460289 ARID3AQ99856 593 aa24.31■■□□□ 1.48
PTPN4-208ENST00000460289 DUSP16Q9BY84 665 aa24.31■■□□□ 1.48
PTPN4-208ENST00000460289 RWDD2AQ9UIY3 292 aa24.31■■□□□ 1.48
PTPN4-208ENST00000460289 ZDHHC11BP0C7U3 371 aa24.3■■□□□ 1.48
PTPN4-208ENST00000460289 CCDC192P0DO97 292 aa24.3■■□□□ 1.48
PTPN4-208ENST00000460289 MBL2P11226 248 aaPredicted RBP24.3■■□□□ 1.48
PTPN4-208ENST00000460289 ARSAP15289 507 aa24.3■■□□□ 1.48
PTPN4-208ENST00000460289 TUBP50607 506 aa24.3■■□□□ 1.48
PTPN4-208ENST00000460289 RAD23BP54727 409 aa24.3■■□□□ 1.48
PTPN4-208ENST00000460289 MARSP56192 900 aaKnown RBP24.3■■□□□ 1.48
PTPN4-208ENST00000460289 MTAPQ13126 283 aa24.3■■□□□ 1.48
PTPN4-208ENST00000460289 NR1H3Q13133 447 aa24.3■■□□□ 1.48
PTPN4-208ENST00000460289 PON2Q15165 354 aa24.3■■□□□ 1.48
PTPN4-208ENST00000460289 MAML2Q8IZL2 1156 aaPredicted RBP24.3■■□□□ 1.48
PTPN4-208ENST00000460289 MLKLQ8NB16 471 aa24.3■■□□□ 1.48
PTPN4-208ENST00000460289 CLSTN2Q9H4D0 955 aa24.3■■□□□ 1.48
PTPN4-208ENST00000460289 ECT2Q9H8V3 914 aa24.3■■□□□ 1.48
PTPN4-208ENST00000460289 TLR8Q9NR97 1041 aaKnown RBP24.3■■□□□ 1.48
PTPN4-208ENST00000460289 CPQQ9Y646 472 aa24.3■■□□□ 1.48
PTPN4-208ENST00000460289 OTOL1A6NHN0 477 aaPredicted RBP24.29■■□□□ 1.48
PTPN4-208ENST00000460289 LRMPQ12912 555 aa24.29■■□□□ 1.48
PTPN4-208ENST00000460289 PPP2R5DQ14738 602 aa24.29■■□□□ 1.48
PTPN4-208ENST00000460289 EML3Q32P44 896 aa24.29■■□□□ 1.48
PTPN4-208ENST00000460289 ZC3H14Q6PJT7 736 aaKnown RBP24.29■■□□□ 1.48
PTPN4-208ENST00000460289 TRIM59Q8IWR1 403 aa24.29■■□□□ 1.48
PTPN4-208ENST00000460289 SYNPOQ8N3V7 929 aa24.29■■□□□ 1.48
PTPN4-208ENST00000460289 SEMA4AQ9H3S1 761 aa24.29■■□□□ 1.48
PTPN4-208ENST00000460289 GMIPQ9P107 970 aa24.29■■□□□ 1.48
PTPN4-208ENST00000460289 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.29■■□□□ 1.48
PTPN4-208ENST00000460289 WNT6Q9Y6F9 365 aa24.29■■□□□ 1.48
PTPN4-208ENST00000460289 HHLA1C9JL84 531 aa24.28■■□□□ 1.48
PTPN4-208ENST00000460289 SLC9A3R1O14745 358 aaPredicted RBP24.28■■□□□ 1.48
PTPN4-208ENST00000460289 ACO1P21399 889 aaKnown RBP24.28■■□□□ 1.48
PTPN4-208ENST00000460289 SLC8A3P57103 927 aa24.28■■□□□ 1.48
PTPN4-208ENST00000460289 ZXDBP98169 803 aa24.28■■□□□ 1.48
PTPN4-208ENST00000460289 CSTF1Q05048 431 aaKnown RBP24.28■■□□□ 1.48
PTPN4-208ENST00000460289 KCNH2Q12809 1159 aa24.28■■□□□ 1.48
PTPN4-208ENST00000460289 ARHGAP17Q68EM7 881 aa24.28■■□□□ 1.48
PTPN4-208ENST00000460289 NKD2Q969F2 451 aaPredicted RBP24.28■■□□□ 1.48
PTPN4-208ENST00000460289 NT5C1BQ96P26 610 aa24.28■■□□□ 1.48
PTPN4-208ENST00000460289 UBXN6Q9BZV1 441 aa24.28■■□□□ 1.48
PTPN4-208ENST00000460289 LINC00597Q9H2U6 94 aa24.28■■□□□ 1.48
PTPN4-208ENST00000460289 SMPD4Q9NXE4 827 aa24.28■■□□□ 1.48
PTPN4-208ENST00000460289 KIAA1257Q9ULG3 409 aa24.28■■□□□ 1.48
PTPN4-208ENST00000460289 SCML2Q9UQR0 700 aa24.28■■□□□ 1.48
PTPN4-208ENST00000460289 CACNA1IQ9P0X4 2223 aa24.27■■□□□ 1.48
PTPN4-208ENST00000460289 TRDMT1O14717 391 aaKnown RBP24.27■■□□□ 1.48
PTPN4-208ENST00000460289 COCHO43405 550 aa24.27■■□□□ 1.48
PTPN4-208ENST00000460289 NFATC1O95644 943 aa24.27■■□□□ 1.48
PTPN4-208ENST00000460289 GJA4P35212 333 aa24.27■■□□□ 1.48
PTPN4-208ENST00000460289 GRSF1Q12849 480 aaKnown RBP eCLIP24.27■■□□□ 1.48
PTPN4-208ENST00000460289 JAKMIP2Q96AA8 810 aa24.27■■□□□ 1.48
PTPN4-208ENST00000460289 NACA2Q9H009 215 aa24.27■■□□□ 1.48
PTPN4-208ENST00000460289 KIF26AQ9ULI4 1882 aaPredicted RBP24.27■■□□□ 1.48
PTPN4-208ENST00000460289 AFPP02771 609 aaKnown RBP24.26■■□□□ 1.47
PTPN4-208ENST00000460289 CCR3P51677 355 aa24.26■■□□□ 1.47
PTPN4-208ENST00000460289 KIF11P52732 1056 aa24.26■■□□□ 1.47
PTPN4-208ENST00000460289 CCINQ13939 588 aa24.26■■□□□ 1.47
PTPN4-208ENST00000460289 GPRIN1Q7Z2K8 1008 aa24.26■■□□□ 1.47
PTPN4-208ENST00000460289 SPEM1Q8N4L4 309 aa24.26■■□□□ 1.47
PTPN4-208ENST00000460289 ANKRD52Q8NB46 1076 aa24.26■■□□□ 1.47
PTPN4-208ENST00000460289 EHBP1Q8NDI1 1231 aa24.26■■□□□ 1.47
PTPN4-208ENST00000460289 NUP62CLQ9H1M0 184 aa24.26■■□□□ 1.47
PTPN4-208ENST00000460289 CCSER2Q9H7U1 834 aa24.26■■□□□ 1.47
PTPN4-208ENST00000460289 PRMT8Q9NR22 394 aaPredicted RBP24.26■■□□□ 1.47
PTPN4-208ENST00000460289 CFAP97Q9P2B7 532 aa24.26■■□□□ 1.47
PTPN4-208ENST00000460289 E2F8A0AVK6 867 aa24.25■■□□□ 1.47
PTPN4-208ENST00000460289 GFRA3O60609 400 aa24.25■■□□□ 1.47
PTPN4-208ENST00000460289 SGO2Q562F6 1265 aa24.25■■□□□ 1.47
PTPN4-208ENST00000460289 TMEM196Q5HYL7 178 aa24.25■■□□□ 1.47
PTPN4-208ENST00000460289 PPM1KQ8N3J5 372 aa24.25■■□□□ 1.47
PTPN4-208ENST00000460289 LMO3Q8TAP4 145 aa24.25■■□□□ 1.47
PTPN4-208ENST00000460289 GBP4Q96PP9 640 aa24.25■■□□□ 1.47
PTPN4-208ENST00000460289 P2RY13Q9BPV8 354 aa24.25■■□□□ 1.47
PTPN4-208ENST00000460289 FAM126AQ9BYI3 521 aaPredicted RBP24.25■■□□□ 1.47
PTPN4-208ENST00000460289 RBM12Q9NTZ6 932 aaKnown RBP24.25■■□□□ 1.47
PTPN4-208ENST00000460289 TBC1D14Q9P2M4 693 aa24.25■■□□□ 1.47
PTPN4-208ENST00000460289 MYH10P35580 1976 aa24.25■■□□□ 1.47
PTPN4-208ENST00000460289 TLR5O60602 858 aa24.24■■□□□ 1.47
PTPN4-208ENST00000460289 VDRP11473 427 aa24.24■■□□□ 1.47
PTPN4-208ENST00000460289 DRD1P21728 446 aa24.24■■□□□ 1.47
PTPN4-208ENST00000460289 CXCL12P48061 93 aa24.24■■□□□ 1.47
PTPN4-208ENST00000460289 PSEN1P49768 467 aa24.24■■□□□ 1.47
PTPN4-208ENST00000460289 GALK1P51570 392 aa24.24■■□□□ 1.47
PTPN4-208ENST00000460289 ADGRG2Q8IZP9 1017 aa24.24■■□□□ 1.47
PTPN4-208ENST00000460289 UBR7Q8N806 425 aa24.24■■□□□ 1.47
PTPN4-208ENST00000460289 CYLDQ9NQC7 956 aa24.24■■□□□ 1.47
PTPN4-208ENST00000460289 LMBRD1Q9NUN5 540 aa24.24■■□□□ 1.47
PTPN4-208ENST00000460289 HESX1Q9UBX0 185 aa24.24■■□□□ 1.47
PTPN4-208ENST00000460289 USP3Q9Y6I4 520 aa24.24■■□□□ 1.47
PTPN4-208ENST00000460289 R4GN57 208 aa24.24■■□□□ 1.47
PTPN4-208ENST00000460289 CYP26A1O43174 497 aa24.23■■□□□ 1.47
PTPN4-208ENST00000460289 CD19P15391 556 aa24.23■■□□□ 1.47
PTPN4-208ENST00000460289 ATP5C1P36542 298 aaKnown RBP24.23■■□□□ 1.47
PTPN4-208ENST00000460289 NRLP54845 237 aa24.23■■□□□ 1.47
PTPN4-208ENST00000460289 GCNT1Q02742 428 aa24.23■■□□□ 1.47
PTPN4-208ENST00000460289 TMEM270Q6UE05 265 aa24.23■■□□□ 1.47
PTPN4-208ENST00000460289 CCDC186Q7Z3E2 898 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms