RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 TTC25Q96NG3 672 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 SLC9A7Q96T83 725 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 TBC1D10AQ9BXI6 508 aa16.51■□□□□ 0.23
CMTM3-203ENST00000460097 NOCTQ9UK39 431 aaKnown RBP16.51■□□□□ 0.23
CMTM3-203ENST00000460097 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.5■□□□□ 0.23
CMTM3-203ENST00000460097 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.5■□□□□ 0.23
CMTM3-203ENST00000460097 TCRBV7S2A1N4TA0A589 114 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 ENO4A6NNW6 628 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 C2CD2LO14523 706 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 NDC80O14777 642 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 SPOPO43791 374 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 EXOC3O60645 756 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 RTN3O95197 1032 aaPredicted RBP16.5■□□□□ 0.23
CMTM3-203ENST00000460097 T-ENOLP0DO92 83 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 MAPTP10636 758 aaKnown RBP16.5■□□□□ 0.23
CMTM3-203ENST00000460097 ATF2P15336 505 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 AXLP30530 894 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 HOXA11P31270 313 aaPredicted RBP16.5■□□□□ 0.23
CMTM3-203ENST00000460097 CHKAP35790 457 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 WDR4P57081 412 aaKnown RBP16.5■□□□□ 0.23
CMTM3-203ENST00000460097 SNRPFP62306 86 aaKnown RBP16.5■□□□□ 0.23
CMTM3-203ENST00000460097 DEFB103AP81534 67 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 MXRA7P84157 204 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 ALCAMQ13740 583 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 AMHR2Q16671 573 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 FAM187BQ17R55 369 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 SLC5A9Q2M3M2 681 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 EPC2Q52LR7 807 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 SLC24A5Q71RS6 500 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 FAM71AQ8IYT1 594 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 GDAP1Q8TB36 358 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 PARD3BQ8TEW8 1205 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 LINC01599Q8WXQ3 324 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 BICD1Q96G01 975 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 TMEM134Q9H6X4 195 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 CYLDQ9NQC7 956 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 C1orf112Q9NSG2 853 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 SEPT11Q9NVA2 429 aaKnown RBP16.5■□□□□ 0.23
CMTM3-203ENST00000460097 ARHGAP28Q9P2N2 729 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 ASIC3Q9UHC3 531 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 PHTF1Q9UMS5 762 aa16.5■□□□□ 0.23
CMTM3-203ENST00000460097 H0YCG3 227 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 ACKR2O00590 384 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 TSPAN1O60635 241 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 ZWINTO95229 277 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 PRKCBP05771 671 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 VHLP40337 213 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 SLC1A1P43005 524 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 PTDSS1P48651 473 aaKnown RBP16.49■□□□□ 0.23
CMTM3-203ENST00000460097 ITGA8P53708 1063 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 KCNA1Q09470 495 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 LRIT3Q3SXY7 679 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 TWF2Q6IBS0 349 aaKnown RBP16.49■□□□□ 0.23
CMTM3-203ENST00000460097 ANKS1BQ7Z6G8 1248 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 TRABD2AQ86V40 505 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 FAM178BQ8IXR5 827 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 CCDC89Q8N998 374 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 TMEM161BQ8NDZ6 487 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 SLC20A1Q8WUM9 679 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 C10orf82Q8WW14 230 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 TOP1MTQ969P6 601 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 FAM167BQ9BTA0 163 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 FAM192AQ9GZU8 254 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 MMADHCQ9H3L0 296 aaPredicted RBP16.49■□□□□ 0.23
CMTM3-203ENST00000460097 FETUBQ9UGM5 382 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 ANAPC5Q9UJX4 755 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 SIGLEC16A6NMB1 481 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 CHRNB2P17787 502 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 ARF4P18085 180 aaPredicted RBP16.49■□□□□ 0.23
CMTM3-203ENST00000460097 NCKAP1LP55160 1127 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 SF3A3Q12874 501 aaKnown RBP eCLIP16.49■□□□□ 0.23
CMTM3-203ENST00000460097 KYNUQ16719 465 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 HAUS6Q7Z4H7 955 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 LONP2Q86WA8 852 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 CYP4X1Q8N118 509 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 EPS8L1Q8TE68 723 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 TEKT4Q8WW24 435 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 CFAP57Q96MR6 1250 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 DCLK3Q9C098 648 aa16.49■□□□□ 0.23
CMTM3-203ENST00000460097 MYH11P35749 1972 aa16.48■□□□□ 0.23
CMTM3-203ENST00000460097 C9IYK1 514 aa16.48■□□□□ 0.23
CMTM3-203ENST00000460097 B4GALT5O43286 388 aa16.48■□□□□ 0.23
CMTM3-203ENST00000460097 SMIM24O75264 130 aa16.48■□□□□ 0.23
CMTM3-203ENST00000460097 UPP2O95045 317 aa16.48■□□□□ 0.23
CMTM3-203ENST00000460097 SKIP12755 728 aa16.48■□□□□ 0.23
CMTM3-203ENST00000460097 GM2AP17900 193 aa16.48■□□□□ 0.23
CMTM3-203ENST00000460097 KCNJ1P48048 391 aa16.48■□□□□ 0.23
CMTM3-203ENST00000460097 FAM189BP81408 668 aa16.48■□□□□ 0.23
CMTM3-203ENST00000460097 ARHGAP44Q17R89 818 aa16.48■□□□□ 0.23
CMTM3-203ENST00000460097 NOTUMQ6P988 496 aa16.48■□□□□ 0.23
CMTM3-203ENST00000460097 HERC6Q8IVU3 1022 aa16.48■□□□□ 0.23
CMTM3-203ENST00000460097 SRRM1Q8IYB3 904 aaKnown RBP16.48■□□□□ 0.23
CMTM3-203ENST00000460097 ZCCHC9Q8N567 271 aaKnown RBP16.48■□□□□ 0.23
CMTM3-203ENST00000460097 SLC17A8Q8NDX2 589 aa16.48■□□□□ 0.23
CMTM3-203ENST00000460097 CPB2Q96IY4 423 aa16.48■□□□□ 0.23
CMTM3-203ENST00000460097 ZBED2Q9BTP6 218 aa16.48■□□□□ 0.23
CMTM3-203ENST00000460097 NUP85Q9BW27 656 aa16.48■□□□□ 0.23
CMTM3-203ENST00000460097 AVENQ9NQS1 362 aaPredicted RBP16.48■□□□□ 0.23
CMTM3-203ENST00000460097 WDR35Q9P2L0 1181 aa16.48■□□□□ 0.23
CMTM3-203ENST00000460097 MICAL3Q7RTP6 2002 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms