RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 WDR24Q96S15 920 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 SMOQ99835 787 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 PRDM12Q9H4Q4 367 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 ABI2Q9NYB9 513 aaPredicted RBP10.87□□□□□ -0.67
USP39-210ENST00000459775 ADAM22Q9P0K1 906 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 DSEQ9UL01 958 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 CDY1Q9Y6F8 540 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 CAPN6Q9Y6Q1 641 aa10.87□□□□□ -0.67
USP39-210ENST00000459775 VWA8A3KMH1 1905 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 TSC2P49815 1807 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 E5RJQ4 531 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 GOLGA8SH3BPF8 625 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 SYN3O14994 580 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 ZSCAN12O43309 604 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 MED7O43513 233 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 SPATA31D3P0C874 917 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 GZMAP12544 262 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 PCSK1P29120 753 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 CTNNB1P35222 781 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 NDUFV1P49821 464 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 KIF5AQ12840 1032 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 PDCLQ13371 301 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 DAB2IPQ5VWQ8 1189 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 ARHGAP17Q68EM7 881 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.86□□□□□ -0.67
USP39-210ENST00000459775 RNF19BQ6ZMZ0 732 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 SPATA31D4Q6ZUB0 917 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 TRIM74Q86UV6 250 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 TRIM73Q86UV7 250 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 FAM35AQ86V20 835 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 ERICH1Q86X53 443 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 SCUBE3Q8IX30 993 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 TTC39CQ8N584 583 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 ANKRD52Q8NB46 1076 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 ZMIZ2Q8NF64 920 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 SLC35G2Q8TBE7 412 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 PHOSPHO2Q8TCD6 241 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 SP7Q8TDD2 431 aaPredicted RBP10.86□□□□□ -0.67
USP39-210ENST00000459775 SLC35F5Q8WV83 523 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 CLP1Q92989 425 aaKnown RBP10.86□□□□□ -0.67
USP39-210ENST00000459775 HNRNPABQ99729 332 aaKnown RBP10.86□□□□□ -0.67
USP39-210ENST00000459775 MIS12Q9H081 205 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 ZCWPW1Q9H0M4 648 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 CHST7Q9NS84 486 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 CNOT8Q9UFF9 292 aaKnown RBP10.86□□□□□ -0.67
USP39-210ENST00000459775 KIAA1257Q9ULG3 409 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 MAFFQ9ULX9 164 aa10.86□□□□□ -0.67
USP39-210ENST00000459775 TMEM110-MUSTN1A8MSY1 372 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 TBC1D4O60343 1298 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 GRAP2O75791 330 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 AP1G2O75843 785 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 LCP1P13796 627 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 MMP8P22894 467 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 OR1D2P34982 312 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 ERVFC1P60507 584 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 PSMD5Q16401 504 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 USP41Q3LFD5 358 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 CLEC20AQ6ZU45 233 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 GIPC2Q8TF65 315 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 CLSTN3Q9BQT9 956 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 LHX5Q9H2C1 402 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 SLC28A3Q9HAS3 691 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 COMMD8Q9NX08 183 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 HESX1Q9UBX0 185 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 PCDHB12Q9Y5F1 795 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 SOD2P04179 222 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 S100BP04271 92 aaPredicted RBP10.85□□□□□ -0.67
USP39-210ENST00000459775 TMEM253P0C7T8 217 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 CPB1P15086 417 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 ANXA13P27216 316 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 CDH5P33151 784 aaPredicted RBP10.85□□□□□ -0.67
USP39-210ENST00000459775 BMPR1AP36894 532 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 RPL7AP62424 266 aaKnown RBP10.85□□□□□ -0.67
USP39-210ENST00000459775 GPC5P78333 572 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 TSPY1Q01534 308 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 IFRD2Q12894 506 aaPredicted RBP10.85□□□□□ -0.67
USP39-210ENST00000459775 DDR2Q16832 855 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 MAP9Q49MG5 647 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 ZNF569Q5MCW4 686 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 PIGZQ86VD9 579 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 PHF13Q86YI8 300 aaPredicted RBP10.85□□□□□ -0.67
USP39-210ENST00000459775 PLPP6Q8IY26 295 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 FBXO22Q8NEZ5 403 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 PPM1EQ8WY54 764 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 CTNNBL1Q8WYA6 563 aaPredicted RBP10.85□□□□□ -0.67
USP39-210ENST00000459775 DUSP16Q9BY84 665 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 CTTNBP2NLQ9P2B4 639 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 RAPGEFL1Q9UHV5 662 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 IKBKGQ9Y6K9 419 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 EYSQ5T1H1 3165 aa10.85□□□□□ -0.67
USP39-210ENST00000459775 UNC80Q8N2C7 3258 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 WDR27A2RRH5 827 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 F8VP50 259 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 ENC1O14682 589 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 PJA2O43164 708 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 LSM8O95777 96 aaKnown RBP10.84□□□□□ -0.67
USP39-210ENST00000459775 NPR3P17342 541 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 IGFBP4P22692 258 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 TNNT3P45378 269 aaPredicted RBP10.84□□□□□ -0.67
USP39-210ENST00000459775 RNASE9P60153 205 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms