RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 ZNF449Q6P9G9 518 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 FAM47EQ6ZV65 393 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 CYS1Q717R9 158 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 ZNF467Q7Z7K2 595 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-202ENST00000459727 LRRC71Q8N4P6 559 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 BANPQ8N9N5 519 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 PPTC7Q8NI37 304 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 JOSD2Q8TAC2 188 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 DCAKDQ8WVC6 231 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 C10orf82Q8WW14 230 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 HSPH1Q92598 858 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 ZNF75CPQ92670 426 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-202ENST00000459727 FAF2Q96CS3 445 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 ERP27Q96DN0 273 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 ACAP3Q96P50 834 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 RNF157Q96PX1 679 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 FAM118BQ9BPY3 351 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 NAT9Q9BTE0 207 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 MMADHCQ9H3L0 296 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-202ENST00000459727 MANSC1Q9H8J5 431 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.22□□□□□ -0.93
HDAC3-202ENST00000459727 ZFP69BQ9UJL9 534 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 SCAF8Q9UPN6 1271 aaKnown RBP9.22□□□□□ -0.93
HDAC3-202ENST00000459727 AGAP1Q9UPQ3 857 aa9.22□□□□□ -0.93
HDAC3-202ENST00000459727 RRN3P2A6NIE6 340 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 VGLL3A8MV65 326 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 LIN7AO14910 233 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-202ENST00000459727 CCDC22O60826 627 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 SPAG7O75391 227 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 CD4P01730 458 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 SNRPAP09012 282 aaKnown RBP9.21□□□□□ -0.94
HDAC3-202ENST00000459727 NEFHP12036 1026 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 MLNP12872 115 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 TCF4P15884 667 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 TPSB2P20231 275 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 PTPN4P29074 926 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 ELF1P32519 619 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 SSTR3P32745 418 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-202ENST00000459727 PNPLA4P41247 253 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 PTPN9P43378 593 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 BCAR1P56945 870 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 GPX6P59796 221 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 PDE4CQ08493 712 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 PTK7Q13308 1070 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 IRF5Q13568 498 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 CRYMQ14894 314 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 KRT72Q14CN4 511 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 FASTKD3Q14CZ7 662 aaKnown RBP9.21□□□□□ -0.94
HDAC3-202ENST00000459727 TPSAB1Q15661 275 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 SMTNL2Q2TAL5 461 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 CMPK2Q5EBM0 449 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 STXBP5Q5T5C0 1151 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 EEF1DP3Q658K8 133 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 SLC9A4Q6AI14 798 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 TXNRD3NBQ6F5E7 133 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 CGB2Q6NT52 195 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 NLRP9Q7RTR0 991 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 LRRC6Q86X45 466 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 APLFQ8IW19 511 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-202ENST00000459727 C4orf33Q8N1A6 199 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 VPS52Q8N1B4 723 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 LINC01465Q8N7H1 131 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 FAM71DQ8N9W8 422 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 GLIS1Q8NBF1 620 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 BEST2Q8NFU1 509 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 ACMSDQ8TDX5 336 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 FAM84AQ96KN4 292 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 RMDN2Q96LZ7 410 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 ZNF560Q96MR9 790 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 PWWP2AQ96N64 755 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 SYT17Q9BSW7 474 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 TSSK1BQ9BXA7 367 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 SLC4A5Q9BY07 1137 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 ELOVL4Q9GZR5 314 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 SDCBP2Q9H190 292 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 MYLK2Q9H1R3 596 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 PDZD7Q9H5P4 517 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 STN1Q9H668 368 aaKnown RBP9.21□□□□□ -0.94
HDAC3-202ENST00000459727 SMYD3Q9H7B4 428 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 TLE6Q9H808 572 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 GBA2Q9HCG7 927 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-202ENST00000459727 MLXIPLQ9NP71 852 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 DPP3Q9NY33 737 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 C15orf41Q9Y2V0 281 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 SLC45A1Q9Y2W3 748 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 TEX264Q9Y6I9 313 aa9.21□□□□□ -0.94
HDAC3-202ENST00000459727 SF3B1O75533 1304 aaKnown RBP eCLIP9.21□□□□□ -0.949e-6■■■■■ 87.9
HDAC3-202ENST00000459727 TCRBV9S1A1TA0A576 114 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 RBM47A0AV96 593 aaKnown RBP9.2□□□□□ -0.94
HDAC3-202ENST00000459727 DCAF8L1A6NGE4 600 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 A6NJR5 290 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 TTLL13PA6NNM8 815 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 GPR25O00155 361 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 COPEO14579 308 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 BIRC5O15392 142 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 KIF1CO43896 1103 aaKnown RBP9.2□□□□□ -0.94
HDAC3-202ENST00000459727 CNMDO75829 334 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 TMEM63AO94886 807 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 HAUS5O94927 633 aa9.2□□□□□ -0.94
HDAC3-202ENST00000459727 ARIH2O95376 493 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms