RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 ZFRQ96KR1 1074 aaKnown RBP11.1□□□□□ -0.63
HDLBP-227ENST00000458564 CGRRF1Q99675 332 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 MRPL45Q9BRJ2 306 aaKnown RBP11.1□□□□□ -0.63
HDLBP-227ENST00000458564 NUSAP1Q9BXS6 441 aaKnown RBP11.1□□□□□ -0.63
HDLBP-227ENST00000458564 SNX25Q9H3E2 840 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 ARHGEF4Q9NR80 690 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 KBTBD4Q9NVX7 518 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 ZMIZ1Q9ULJ6 1067 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 UBE4BO95155 1302 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 TNRC6BQ9UPQ9 1833 aaKnown RBP11.09□□□□□ -0.63
HDLBP-227ENST00000458564 AKAP13Q12802 2813 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 TGFB1I1O43294 461 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 RTN3O95197 1032 aaPredicted RBP11.09□□□□□ -0.63
HDLBP-227ENST00000458564 CST3P01034 146 aaPredicted RBP11.09□□□□□ -0.63
HDLBP-227ENST00000458564 MBL2P11226 248 aaPredicted RBP11.09□□□□□ -0.63
HDLBP-227ENST00000458564 YWHAQP27348 245 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 TIE1P35590 1138 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 PTGER3P43115 390 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 SLC6A11P48066 632 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 SNRPFP62306 86 aaKnown RBP11.09□□□□□ -0.63
HDLBP-227ENST00000458564 TNNC1P63316 161 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 CYP24A1Q07973 514 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 E2F4Q16254 413 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 PREPLQ4J6C6 727 aaPredicted RBP11.09□□□□□ -0.63
HDLBP-227ENST00000458564 FAM173BQ6P4H8 233 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 HS2ST1Q7LGA3 356 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 TRMT11Q7Z4G4 463 aaKnown RBP11.09□□□□□ -0.63
HDLBP-227ENST00000458564 PIP4P1Q86T03 277 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 NUP93Q8N1F7 819 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 OR6B3Q8NGW1 331 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 ZNF507Q8TCN5 953 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 RLN3Q8WXF3 142 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 USP28Q96RU2 1077 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 TRIM9Q9C026 710 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 ZNF518BQ9C0D4 1074 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 LRRC27Q9C0I9 530 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 XYLT2Q9H1B5 865 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 CUEDC2Q9H467 287 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 DPEP3Q9H4B8 488 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 VRTNQ9H8Y1 702 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 AGPAT3Q9NRZ7 376 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 IL37Q9NZH6 218 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 MBD1Q9UIS9 605 aaPredicted RBP11.09□□□□□ -0.63
HDLBP-227ENST00000458564 PILRBQ9UKJ0 227 aa11.09□□□□□ -0.63
HDLBP-227ENST00000458564 LAMA5O15230 3695 aa11.08□□□□□ -0.63
HDLBP-227ENST00000458564 GON4LQ3T8J9 2241 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 TCRBV21S2A2A0A5A6 115 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 FAM92AA1XBS5 289 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 SCAMP3O14828 347 aaKnown RBP11.08□□□□□ -0.64
HDLBP-227ENST00000458564 COCHO43405 550 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 ABL1P00519 1130 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 ZDHHC11BP0C7U3 371 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 DLATP10515 647 aaKnown RBP11.08□□□□□ -0.64
HDLBP-227ENST00000458564 ENGP17813 658 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 TNNI1P19237 187 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 SYT1P21579 422 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 ATICP31939 592 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 NASPP49321 788 aaPredicted RBP11.08□□□□□ -0.64
HDLBP-227ENST00000458564 CEBPZQ03701 1054 aaKnown RBP11.08□□□□□ -0.64
HDLBP-227ENST00000458564 GAD2Q05329 585 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 KDSRQ06136 332 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 EHHADHQ08426 723 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 SEMA3BQ13214 749 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 WDR72Q3MJ13 1102 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 FAM26FQ5R3K3 315 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 LY6G5CQ5SRR4 150 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 HECTD3Q5T447 861 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 EMC10Q5UCC4 262 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 LYSMD4Q5XG99 296 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 TMEFF1Q8IYR6 380 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 PDILTQ8N807 584 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 TERB1Q8NA31 727 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 DEFB124Q8NES8 71 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 HMGB4Q8WW32 186 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 HPS3Q969F9 1004 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 SCNM1Q9BWG6 230 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 B3GNT5Q9BYG0 378 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 PANK2Q9BZ23 570 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 GZF1Q9H116 711 aaPredicted RBP11.08□□□□□ -0.64
HDLBP-227ENST00000458564 SLC32A1Q9H598 525 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 TMEM74BQ9NUR3 256 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 BCCIPQ9P287 314 aaKnown RBP eCLIP11.08□□□□□ -0.64
HDLBP-227ENST00000458564 NEUROG3Q9Y4Z2 214 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 PCNX2A6NKB5 2137 aa11.08□□□□□ -0.64
HDLBP-227ENST00000458564 A8MXQ7 604 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 CLDN5O00501 218 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 MAP3K13O43283 966 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 AP5Z1O43299 807 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 TULP3O75386 442 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 TOP3BO95985 862 aaKnown RBP11.07□□□□□ -0.64
HDLBP-227ENST00000458564 SPINK2P20155 84 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 SLC5A3P53794 718 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 UAP1L1Q3KQV9 507 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 BTBD8Q5XKL5 378 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 RABEPKQ7Z6M1 372 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 FAM35AQ86V20 835 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 TTC30AQ86WT1 665 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 C12orf56Q8IXR9 622 aa11.07□□□□□ -0.64
HDLBP-227ENST00000458564 FRMD1Q8N878 549 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms