RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 RHBDF2Q6PJF5 856 aa22.87■■□□□ 1.25
CPNE1-220ENST00000458038 NUDT18Q6ZVK8 323 aa22.87■■□□□ 1.25
CPNE1-220ENST00000458038 KCNV2Q8TDN2 545 aa22.87■■□□□ 1.25
CPNE1-220ENST00000458038 FBXO32Q969P5 355 aa22.87■■□□□ 1.25
CPNE1-220ENST00000458038 DPEP3Q9H4B8 488 aa22.87■■□□□ 1.25
CPNE1-220ENST00000458038 POLMQ9NP87 494 aaPredicted RBP22.87■■□□□ 1.25
CPNE1-220ENST00000458038 NME7Q9Y5B8 376 aa22.87■■□□□ 1.25
CPNE1-220ENST00000458038 CACNA2D1P54289 1103 aa22.86■■□□□ 1.25
CPNE1-220ENST00000458038 EOGTQ5NDL2 527 aa22.86■■□□□ 1.25
CPNE1-220ENST00000458038 HECTD3Q5T447 861 aa22.86■■□□□ 1.25
CPNE1-220ENST00000458038 CYP2U1Q7Z449 544 aa22.86■■□□□ 1.25
CPNE1-220ENST00000458038 CCDC33Q8N5R6 958 aa22.86■■□□□ 1.25
CPNE1-220ENST00000458038 TPSD1Q9BZJ3 242 aa22.86■■□□□ 1.25
CPNE1-220ENST00000458038 FOXD4L1Q9NU39 408 aa22.86■■□□□ 1.25
CPNE1-220ENST00000458038 TMEM30AQ9NV96 361 aa22.86■■□□□ 1.25
CPNE1-220ENST00000458038 FAM13BQ9NYF5 915 aa22.86■■□□□ 1.25
CPNE1-220ENST00000458038 IL37Q9NZH6 218 aa22.86■■□□□ 1.25
CPNE1-220ENST00000458038 ADH5P11766 374 aa22.85■■□□□ 1.25
CPNE1-220ENST00000458038 DPP6P42658 865 aa22.85■■□□□ 1.25
CPNE1-220ENST00000458038 CLDN10P78369 228 aa22.85■■□□□ 1.25
CPNE1-220ENST00000458038 GAD2Q05329 585 aa22.85■■□□□ 1.25
CPNE1-220ENST00000458038 ZNF667Q5HYK9 610 aa22.85■■□□□ 1.25
CPNE1-220ENST00000458038 SPDYCQ5MJ68 293 aa22.85■■□□□ 1.25
CPNE1-220ENST00000458038 ATL3Q6DD88 541 aa22.85■■□□□ 1.25
CPNE1-220ENST00000458038 TCEAL6Q6IPX3 200 aa22.85■■□□□ 1.25
CPNE1-220ENST00000458038 IL17RCQ8NAC3 791 aa22.85■■□□□ 1.25
CPNE1-220ENST00000458038 MDGA1Q8NFP4 955 aa22.85■■□□□ 1.25
CPNE1-220ENST00000458038 OLIG1Q8TAK6 271 aa22.85■■□□□ 1.25
CPNE1-220ENST00000458038 PARD3BQ8TEW8 1205 aa22.85■■□□□ 1.25
CPNE1-220ENST00000458038 WHAMMQ8TF30 809 aa22.85■■□□□ 1.25
CPNE1-220ENST00000458038 TMEM174Q8WUU8 243 aa22.85■■□□□ 1.25
CPNE1-220ENST00000458038 TCEAL3Q969E4 200 aa22.85■■□□□ 1.25
CPNE1-220ENST00000458038 SMARCD1Q96GM5 515 aa22.85■■□□□ 1.25
CPNE1-220ENST00000458038 SPACA7Q96KW9 195 aa22.85■■□□□ 1.25
CPNE1-220ENST00000458038 GZF1Q9H116 711 aaPredicted RBP22.85■■□□□ 1.25
CPNE1-220ENST00000458038 SLC39A2Q9NP94 309 aa22.85■■□□□ 1.25
CPNE1-220ENST00000458038 DMAP1Q9NPF5 467 aaPredicted RBP22.85■■□□□ 1.25
CPNE1-220ENST00000458038 ARHGEF4Q9NR80 690 aa22.85■■□□□ 1.25
CPNE1-220ENST00000458038 CHD6Q8TD26 2715 aa22.85■■□□□ 1.25
CPNE1-220ENST00000458038 LNP1A1A4G5 178 aa22.84■■□□□ 1.25
CPNE1-220ENST00000458038 C4orf47A7E2U8 309 aa22.84■■□□□ 1.25
CPNE1-220ENST00000458038 CLDN5O00501 218 aa22.84■■□□□ 1.25
CPNE1-220ENST00000458038 KLF8O95600 359 aaPredicted RBP22.84■■□□□ 1.25
CPNE1-220ENST00000458038 P4HA1P13674 534 aa22.84■■□□□ 1.25
CPNE1-220ENST00000458038 IFRD2Q12894 506 aaPredicted RBP22.84■■□□□ 1.25
CPNE1-220ENST00000458038 BIRC3Q13489 604 aa22.84■■□□□ 1.25
CPNE1-220ENST00000458038 ZNF699Q32M78 642 aa22.84■■□□□ 1.25
CPNE1-220ENST00000458038 BTBD8Q5XKL5 378 aa22.84■■□□□ 1.25
CPNE1-220ENST00000458038 TRMT11Q7Z4G4 463 aaKnown RBP22.84■■□□□ 1.25
CPNE1-220ENST00000458038 ALLCQ8N6M5 410 aa22.84■■□□□ 1.25
CPNE1-220ENST00000458038 TXNDC5Q8NBS9 432 aaKnown RBP22.84■■□□□ 1.25
CPNE1-220ENST00000458038 MED10Q9BTT4 135 aa22.84■■□□□ 1.25
CPNE1-220ENST00000458038 TMEM9BQ9NQ34 198 aa22.84■■□□□ 1.25
CPNE1-220ENST00000458038 INVSQ9Y283 1065 aa22.84■■□□□ 1.25
CPNE1-220ENST00000458038 PLXND1Q9Y4D7 1925 aa22.84■■□□□ 1.25
CPNE1-220ENST00000458038 FAM92AA1XBS5 289 aa22.83■■□□□ 1.25
CPNE1-220ENST00000458038 TNFRSF10BO14763 440 aa22.83■■□□□ 1.25
CPNE1-220ENST00000458038 COCHO43405 550 aa22.83■■□□□ 1.25
CPNE1-220ENST00000458038 KIR2DL1P43626 348 aaPredicted RBP22.83■■□□□ 1.25
CPNE1-220ENST00000458038 SLC6A11P48066 632 aa22.83■■□□□ 1.25
CPNE1-220ENST00000458038 NCOA4Q13772 614 aa22.83■■□□□ 1.25
CPNE1-220ENST00000458038 LY6G5CQ5SRR4 150 aa22.83■■□□□ 1.25
CPNE1-220ENST00000458038 TMEM92Q6UXU6 159 aa22.83■■□□□ 1.25
CPNE1-220ENST00000458038 LPCAT2Q7L5N7 544 aa22.83■■□□□ 1.25
CPNE1-220ENST00000458038 KCNK16Q96T55 309 aa22.83■■□□□ 1.25
CPNE1-220ENST00000458038 FBXO44Q9H4M3 255 aa22.83■■□□□ 1.25
CPNE1-220ENST00000458038 CHORDC1Q9UHD1 332 aaPredicted RBP22.83■■□□□ 1.25
CPNE1-220ENST00000458038 EVLQ9UI08 416 aaPredicted RBP22.83■■□□□ 1.25
CPNE1-220ENST00000458038 SH3BP1Q9Y3L3 701 aa22.83■■□□□ 1.25
CPNE1-220ENST00000458038 RPN1P04843 607 aaKnown RBP22.82■■□□□ 1.24
CPNE1-220ENST00000458038 ZDHHC11BP0C7U3 371 aa22.82■■□□□ 1.24
CPNE1-220ENST00000458038 TRIM21P19474 475 aaKnown RBP22.82■■□□□ 1.24
CPNE1-220ENST00000458038 TIE1P35590 1138 aa22.82■■□□□ 1.24
CPNE1-220ENST00000458038 P2RY2P41231 377 aa22.82■■□□□ 1.24
CPNE1-220ENST00000458038 ME1P48163 572 aa22.82■■□□□ 1.24
CPNE1-220ENST00000458038 DHPSP49366 369 aaPredicted RBP22.82■■□□□ 1.24
CPNE1-220ENST00000458038 SLC5A3P53794 718 aa22.82■■□□□ 1.24
CPNE1-220ENST00000458038 CDH8P55286 799 aa22.82■■□□□ 1.24
CPNE1-220ENST00000458038 SGSM1Q2NKQ1 1148 aa22.82■■□□□ 1.24
CPNE1-220ENST00000458038 PSAPL1Q6NUJ1 521 aa22.82■■□□□ 1.24
CPNE1-220ENST00000458038 FAM35AQ86V20 835 aa22.82■■□□□ 1.24
CPNE1-220ENST00000458038 SLC9A9Q8IVB4 645 aa22.82■■□□□ 1.24
CPNE1-220ENST00000458038 CEP57L1Q8IYX8 460 aa22.82■■□□□ 1.24
CPNE1-220ENST00000458038 TAF4BQ92750 862 aa22.82■■□□□ 1.24
CPNE1-220ENST00000458038 ZFRQ96KR1 1074 aaKnown RBP22.82■■□□□ 1.24
CPNE1-220ENST00000458038 BLZF1Q9H2G9 400 aa22.82■■□□□ 1.24
CPNE1-220ENST00000458038 SMYD3Q9H7B4 428 aa22.82■■□□□ 1.24
CPNE1-220ENST00000458038 DMAC2Q9NW81 257 aa22.82■■□□□ 1.24
CPNE1-220ENST00000458038 CFAP47Q6ZTR5 3102 aa22.82■■□□□ 1.24
CPNE1-220ENST00000458038 ASCC3Q8N3C0 2202 aaKnown RBP22.82■■□□□ 1.24
CPNE1-220ENST00000458038 PCNX2A6NKB5 2137 aa22.81■■□□□ 1.24
CPNE1-220ENST00000458038 SGK1O00141 431 aa22.81■■□□□ 1.24
CPNE1-220ENST00000458038 HOXC11O43248 304 aaPredicted RBP22.81■■□□□ 1.24
CPNE1-220ENST00000458038 MAP3K13O43283 966 aa22.81■■□□□ 1.24
CPNE1-220ENST00000458038 C4BPAP04003 597 aaKnown RBP22.81■■□□□ 1.24
CPNE1-220ENST00000458038 CHRM1P11229 460 aaPredicted RBP22.81■■□□□ 1.24
CPNE1-220ENST00000458038 BCKDHBP21953 392 aa22.81■■□□□ 1.24
CPNE1-220ENST00000458038 LMAN2Q12907 356 aa22.81■■□□□ 1.24
CPNE1-220ENST00000458038 RESP18Q5W5W9 173 aa22.81■■□□□ 1.24
CPNE1-220ENST00000458038 PAQR9Q6ZVX9 377 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms