RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 RMND1Q9NWS8 449 aa13.12□□□□□ -0.31
VEGFA-210ENST00000457104 SMG5Q9UPR3 1016 aaKnown RBP13.12□□□□□ -0.31
VEGFA-210ENST00000457104 CPQQ9Y646 472 aa13.12□□□□□ -0.31
VEGFA-210ENST00000457104 MYO18AQ92614 2054 aaKnown RBP13.11□□□□□ -0.31
VEGFA-210ENST00000457104 CHURC1-FNTBB4DL54 471 aa13.11□□□□□ -0.31
VEGFA-210ENST00000457104 HHLA1C9JL84 531 aa13.11□□□□□ -0.31
VEGFA-210ENST00000457104 CETN3O15182 167 aa13.11□□□□□ -0.31
VEGFA-210ENST00000457104 COCHO43405 550 aa13.11□□□□□ -0.31
VEGFA-210ENST00000457104 HRO43593 1189 aa13.11□□□□□ -0.31
VEGFA-210ENST00000457104 CILPO75339 1184 aa13.11□□□□□ -0.31
VEGFA-210ENST00000457104 DRD1P21728 446 aa13.11□□□□□ -0.31
VEGFA-210ENST00000457104 HOXA6P31267 233 aa13.11□□□□□ -0.31
VEGFA-210ENST00000457104 FNTBP49356 437 aa13.11□□□□□ -0.31
VEGFA-210ENST00000457104 MAP3K7CLP57077 242 aa13.11□□□□□ -0.31
VEGFA-210ENST00000457104 AMPD2Q01433 879 aa13.11□□□□□ -0.31
VEGFA-210ENST00000457104 KRT39Q6A163 491 aa13.11□□□□□ -0.31
VEGFA-210ENST00000457104 KIAA2013Q8IYS2 634 aa13.11□□□□□ -0.31
VEGFA-210ENST00000457104 ADGRG2Q8IZP9 1017 aa13.11□□□□□ -0.31
VEGFA-210ENST00000457104 KIAA1958Q8N8K9 716 aa13.11□□□□□ -0.31
VEGFA-210ENST00000457104 HNRNPABQ99729 332 aaKnown RBP13.11□□□□□ -0.31
VEGFA-210ENST00000457104 IMPG2Q9BZV3 1241 aa13.11□□□□□ -0.31
VEGFA-210ENST00000457104 NIF3L1Q9GZT8 377 aa13.11□□□□□ -0.31
VEGFA-210ENST00000457104 CCSER2Q9H7U1 834 aa13.11□□□□□ -0.31
VEGFA-210ENST00000457104 COMMD8Q9NX08 183 aa13.11□□□□□ -0.31
VEGFA-210ENST00000457104 SMPD4Q9NXE4 827 aa13.11□□□□□ -0.31
VEGFA-210ENST00000457104 TRIM49BA6NDI0 452 aa13.1□□□□□ -0.31
VEGFA-210ENST00000457104 SCAMP3O14828 347 aaKnown RBP13.1□□□□□ -0.31
VEGFA-210ENST00000457104 RNF40O75150 1001 aa13.1□□□□□ -0.31
VEGFA-210ENST00000457104 SMC2O95347 1197 aa13.1□□□□□ -0.31
VEGFA-210ENST00000457104 EPB41P11171 864 aaKnown RBP13.1□□□□□ -0.31
VEGFA-210ENST00000457104 CD58P19256 250 aa13.1□□□□□ -0.31
VEGFA-210ENST00000457104 ADORA2BP29275 332 aa13.1□□□□□ -0.31
VEGFA-210ENST00000457104 OPRD1P41143 372 aa13.1□□□□□ -0.31
VEGFA-210ENST00000457104 SRSF5Q13243 272 aaKnown RBP13.1□□□□□ -0.31
VEGFA-210ENST00000457104 HEATR6Q6AI08 1181 aaKnown RBP13.1□□□□□ -0.31
VEGFA-210ENST00000457104 CLEC20AQ6ZU45 233 aa13.1□□□□□ -0.31
VEGFA-210ENST00000457104 GPRIN1Q7Z2K8 1008 aa13.1□□□□□ -0.31
VEGFA-210ENST00000457104 FILIP1Q7Z7B0 1213 aa13.1□□□□□ -0.31
VEGFA-210ENST00000457104 ELOA2Q8IYF1 753 aaPredicted RBP13.1□□□□□ -0.31
VEGFA-210ENST00000457104 CD101Q93033 1021 aa13.1□□□□□ -0.31
VEGFA-210ENST00000457104 SMARCE1Q969G3 411 aa13.1□□□□□ -0.31
VEGFA-210ENST00000457104 CYFIP2Q96F07 1278 aa13.1□□□□□ -0.31
VEGFA-210ENST00000457104 NT5C1AQ9BXI3 368 aa13.1□□□□□ -0.31
VEGFA-210ENST00000457104 POLR3BQ9NW08 1133 aaPredicted RBP13.1□□□□□ -0.31
VEGFA-210ENST00000457104 GMIPQ9P107 970 aa13.1□□□□□ -0.31
VEGFA-210ENST00000457104 CFAP97Q9P2B7 532 aa13.1□□□□□ -0.31
VEGFA-210ENST00000457104 CEP250Q9BV73 2442 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 ANTXRLA6NF34 631 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 NFATC1O95644 943 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 CYP17A1P05093 508 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 FAM200BP0CF97 657 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 MBL2P11226 248 aaPredicted RBP13.09□□□□□ -0.31
VEGFA-210ENST00000457104 CD44P16070 742 aaKnown RBP13.09□□□□□ -0.31
VEGFA-210ENST00000457104 TGM1P22735 817 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 MXI1P50539 228 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 TUBP50607 506 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 FKBP3Q00688 224 aaKnown RBP13.09□□□□□ -0.31
VEGFA-210ENST00000457104 NR1H3Q13133 447 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 CBWD6Q4V339 395 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 CBWD3Q5JTY5 395 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 CBWD5Q5RIA9 395 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 HECTD3Q5T447 861 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 ISM2Q6H9L7 571 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 LONP2Q86WA8 852 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 FBXL13Q8NEE6 735 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 TATDN2Q93075 761 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 WBP2Q969T9 261 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 FAXDC2Q96IV6 333 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 ARID3AQ99856 593 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 HINFPQ9BQA5 517 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 RAB20Q9NX57 234 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 NCDNQ9UBB6 729 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 COQ4Q9Y3A0 265 aa13.09□□□□□ -0.31
VEGFA-210ENST00000457104 DNAH14Q0VDD8 3507 aa13.08□□□□□ -0.32
VEGFA-210ENST00000457104 E2F8A0AVK6 867 aa13.08□□□□□ -0.32
VEGFA-210ENST00000457104 K7EQS6 105 aa13.08□□□□□ -0.32
VEGFA-210ENST00000457104 SLC16A3O15427 465 aaKnown RBP13.08□□□□□ -0.32
VEGFA-210ENST00000457104 STX10O60499 249 aa13.08□□□□□ -0.32
VEGFA-210ENST00000457104 ATG13O75143 517 aa13.08□□□□□ -0.32
VEGFA-210ENST00000457104 GADD45BO75293 160 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-210ENST00000457104 BMP6P22004 513 aa13.08□□□□□ -0.32
VEGFA-210ENST00000457104 LRRC63Q05C16 580 aa13.08□□□□□ -0.32
VEGFA-210ENST00000457104 MESP2Q0VG99 397 aa13.08□□□□□ -0.32
VEGFA-210ENST00000457104 DHCR24Q15392 516 aa13.08□□□□□ -0.32
VEGFA-210ENST00000457104 LPAL2Q16609 132 aa13.08□□□□□ -0.32
VEGFA-210ENST00000457104 FBXO43Q4G163 708 aa13.08□□□□□ -0.32
VEGFA-210ENST00000457104 ZNF394Q53GI3 561 aa13.08□□□□□ -0.32
VEGFA-210ENST00000457104 PPP1R26Q5T8A7 1209 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-210ENST00000457104 RHBDF2Q6PJF5 856 aa13.08□□□□□ -0.32
VEGFA-210ENST00000457104 WDR5BQ86VZ2 330 aa13.08□□□□□ -0.32
VEGFA-210ENST00000457104 DDX42Q86XP3 938 aaKnown RBP eCLIP13.08□□□□□ -0.325e-7■■■■□ 19.9
VEGFA-210ENST00000457104 SLC4A11Q8NBS3 891 aa13.08□□□□□ -0.32
VEGFA-210ENST00000457104 CCDC150Q8NCX0 1101 aa13.08□□□□□ -0.32
VEGFA-210ENST00000457104 TSG101Q99816 390 aa13.08□□□□□ -0.32
VEGFA-210ENST00000457104 FBXO44Q9H4M3 255 aa13.08□□□□□ -0.32
VEGFA-210ENST00000457104 OSER1Q9NX31 292 aa13.08□□□□□ -0.32
VEGFA-210ENST00000457104 MAN1B1Q9UKM7 699 aa13.08□□□□□ -0.32
VEGFA-210ENST00000457104 SCML2Q9UQR0 700 aa13.08□□□□□ -0.32
VEGFA-210ENST00000457104 SDK1Q7Z5N4 2213 aa13.08□□□□□ -0.32
VEGFA-210ENST00000457104 SLC9A3R1O14745 358 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms