RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 F5P12259 2224 aa24.47■■□□□ 1.51
CBX3-204ENST00000456948 ANAPC1Q9H1A4 1944 aa24.47■■□□□ 1.51
CBX3-204ENST00000456948 H0Y858 1186 aa24.46■■□□□ 1.51
CBX3-204ENST00000456948 SLC9A3R1O14745 358 aaPredicted RBP24.46■■□□□ 1.51
CBX3-204ENST00000456948 DCNP07585 359 aaKnown RBP24.46■■□□□ 1.51
CBX3-204ENST00000456948 MBL2P11226 248 aaPredicted RBP24.46■■□□□ 1.51
CBX3-204ENST00000456948 CD72P21854 359 aa24.46■■□□□ 1.51
CBX3-204ENST00000456948 PSEN1P49768 467 aa24.46■■□□□ 1.51
CBX3-204ENST00000456948 RUNX3Q13761 415 aa24.46■■□□□ 1.51
CBX3-204ENST00000456948 ATOH1Q92858 354 aaPredicted RBP24.46■■□□□ 1.51
CBX3-204ENST00000456948 SLC22A12Q96S37 553 aa24.46■■□□□ 1.51
CBX3-204ENST00000456948 FAM83CQ9BQN1 747 aa24.46■■□□□ 1.51
CBX3-204ENST00000456948 DUS2Q9NX74 493 aaKnown RBP24.46■■□□□ 1.51
CBX3-204ENST00000456948 GTPBP10A4D1E9 387 aaKnown RBP24.45■■□□□ 1.5
CBX3-204ENST00000456948 OAS1P00973 400 aaKnown RBP24.45■■□□□ 1.5
CBX3-204ENST00000456948 BCAT1P54687 386 aa24.45■■□□□ 1.5
CBX3-204ENST00000456948 ZNF77Q15935 545 aa24.45■■□□□ 1.5
CBX3-204ENST00000456948 MAN2A1Q16706 1144 aa24.45■■□□□ 1.5
CBX3-204ENST00000456948 EXOC3L4Q17RC7 722 aa24.45■■□□□ 1.5
CBX3-204ENST00000456948 CCDC183Q5T5S1 534 aa24.45■■□□□ 1.5
CBX3-204ENST00000456948 RRAGAQ7L523 313 aa24.45■■□□□ 1.5
CBX3-204ENST00000456948 ARHGAP18Q8N392 663 aa24.45■■□□□ 1.5
CBX3-204ENST00000456948 CPA6Q8N4T0 437 aa24.45■■□□□ 1.5
CBX3-204ENST00000456948 LMO3Q8TAP4 145 aa24.45■■□□□ 1.5
CBX3-204ENST00000456948 OSCP1Q8WVF1 389 aa24.45■■□□□ 1.5
CBX3-204ENST00000456948 ATP2A3Q93084 1043 aa24.45■■□□□ 1.5
CBX3-204ENST00000456948 PHOX2BQ99453 314 aa24.45■■□□□ 1.5
CBX3-204ENST00000456948 FAM86C1Q9NVL1 165 aa24.45■■□□□ 1.5
CBX3-204ENST00000456948 ANO10Q9NW15 660 aa24.45■■□□□ 1.5
CBX3-204ENST00000456948 GTSE1Q9NYZ3 720 aa24.45■■□□□ 1.5
CBX3-204ENST00000456948 GMIPQ9P107 970 aa24.45■■□□□ 1.5
CBX3-204ENST00000456948 NDRG2Q9UN36 371 aaKnown RBP24.45■■□□□ 1.5
CBX3-204ENST00000456948 TICRRQ7Z2Z1 1910 aa24.44■■□□□ 1.5
CBX3-204ENST00000456948 SPECC1L-ADORA2AF8WAN1 911 aa24.44■■□□□ 1.5
CBX3-204ENST00000456948 TPM2P07951 284 aa24.44■■□□□ 1.5
CBX3-204ENST00000456948 MRE11P49959 708 aa24.44■■□□□ 1.5
CBX3-204ENST00000456948 MFAP3P55082 362 aa24.44■■□□□ 1.5
CBX3-204ENST00000456948 GOLGA8FQ08AF8 430 aa24.44■■□□□ 1.5
CBX3-204ENST00000456948 GOLGA8DPQ0D2H9 430 aa24.44■■□□□ 1.5
CBX3-204ENST00000456948 RBM43Q6ZSC3 357 aaKnown RBP24.44■■□□□ 1.5
CBX3-204ENST00000456948 CDK5RAP1Q96SZ6 601 aaKnown RBP24.44■■□□□ 1.5
CBX3-204ENST00000456948 UBE2TQ9NPD8 197 aaPredicted RBP24.44■■□□□ 1.5
CBX3-204ENST00000456948 CPQQ9Y646 472 aa24.44■■□□□ 1.5
CBX3-204ENST00000456948 LEFTY2O00292 366 aa24.43■■□□□ 1.5
CBX3-204ENST00000456948 OLFM2O95897 454 aa24.43■■□□□ 1.5
CBX3-204ENST00000456948 ZDHHC11BP0C7U3 371 aa24.43■■□□□ 1.5
CBX3-204ENST00000456948 RALAP11233 206 aa24.43■■□□□ 1.5
CBX3-204ENST00000456948 RPS9P46781 194 aaKnown RBP24.43■■□□□ 1.5
CBX3-204ENST00000456948 KIF11P52732 1056 aa24.43■■□□□ 1.5
CBX3-204ENST00000456948 USP4Q13107 963 aa24.43■■□□□ 1.5
CBX3-204ENST00000456948 LRRC32Q14392 662 aa24.43■■□□□ 1.5
CBX3-204ENST00000456948 GOLGA7BQ2TAP0 167 aa24.43■■□□□ 1.5
CBX3-204ENST00000456948 SMYD5Q6GMV2 418 aa24.43■■□□□ 1.5
CBX3-204ENST00000456948 IRF2BP1Q8IU81 584 aa24.43■■□□□ 1.5
CBX3-204ENST00000456948 ENOX1Q8TC92 643 aaKnown RBP24.43■■□□□ 1.5
CBX3-204ENST00000456948 MED15Q96RN5 788 aa24.43■■□□□ 1.5
CBX3-204ENST00000456948 IER2Q9BTL4 223 aa24.43■■□□□ 1.5
CBX3-204ENST00000456948 RNF38Q9H0F5 515 aa24.43■■□□□ 1.5
CBX3-204ENST00000456948 EBF3Q9H4W6 596 aa24.43■■□□□ 1.5
CBX3-204ENST00000456948 TSPAN16Q9UKR8 245 aa24.43■■□□□ 1.5
CBX3-204ENST00000456948 MIA3Q5JRA6 1907 aa24.43■■□□□ 1.5
CBX3-204ENST00000456948 HHLA1C9JL84 531 aa24.42■■□□□ 1.5
CBX3-204ENST00000456948 PES1O00541 588 aaKnown RBP24.42■■□□□ 1.5
CBX3-204ENST00000456948 NFATC1O95644 943 aa24.42■■□□□ 1.5
CBX3-204ENST00000456948 SETSIPP0DME0 302 aa24.42■■□□□ 1.5
CBX3-204ENST00000456948 KRT5P13647 590 aa24.42■■□□□ 1.5
CBX3-204ENST00000456948 TARSP26639 723 aaKnown RBP24.42■■□□□ 1.5
CBX3-204ENST00000456948 EEF1GP26641 437 aaKnown RBP24.42■■□□□ 1.5
CBX3-204ENST00000456948 CTHP32929 405 aa24.42■■□□□ 1.5
CBX3-204ENST00000456948 TNK2Q07912 1038 aa24.42■■□□□ 1.5
CBX3-204ENST00000456948 BST2Q10589 180 aaKnown RBP24.42■■□□□ 1.5
CBX3-204ENST00000456948 CCDC186Q7Z3E2 898 aa24.42■■□□□ 1.5
CBX3-204ENST00000456948 UBR7Q8N806 425 aa24.42■■□□□ 1.5
CBX3-204ENST00000456948 TTC8Q8TAM2 541 aa24.42■■□□□ 1.5
CBX3-204ENST00000456948 CLDN23Q96B33 292 aa24.42■■□□□ 1.5
CBX3-204ENST00000456948 TUBGCP2Q9BSJ2 902 aa24.42■■□□□ 1.5
CBX3-204ENST00000456948 CRACR2AQ9BSW2 395 aa24.42■■□□□ 1.5
CBX3-204ENST00000456948 LRRC4Q9HBW1 653 aa24.42■■□□□ 1.5
CBX3-204ENST00000456948 SMPD4Q9NXE4 827 aa24.42■■□□□ 1.5
CBX3-204ENST00000456948 TBC1D14Q9P2M4 693 aa24.42■■□□□ 1.5
CBX3-204ENST00000456948 XPO1O14980 1071 aaKnown RBP24.41■■□□□ 1.5
CBX3-204ENST00000456948 COCHO43405 550 aa24.41■■□□□ 1.5
CBX3-204ENST00000456948 TLR5O60602 858 aa24.41■■□□□ 1.5
CBX3-204ENST00000456948 ATP5C1P36542 298 aaKnown RBP24.41■■□□□ 1.5
CBX3-204ENST00000456948 PPP2R5DQ14738 602 aa24.41■■□□□ 1.5
CBX3-204ENST00000456948 STX1AQ16623 288 aa24.41■■□□□ 1.5
CBX3-204ENST00000456948 VWA3BQ502W6 1294 aa24.41■■□□□ 1.5
CBX3-204ENST00000456948 DGKKQ5KSL6 1271 aa24.41■■□□□ 1.5
CBX3-204ENST00000456948 TRIM65Q6PJ69 517 aa24.41■■□□□ 1.5
CBX3-204ENST00000456948 PIGZQ86VD9 579 aa24.41■■□□□ 1.5
CBX3-204ENST00000456948 C1orf210Q8IVY1 113 aa24.41■■□□□ 1.5
CBX3-204ENST00000456948 RBBP8NLQ8NC74 664 aaPredicted RBP24.41■■□□□ 1.5
CBX3-204ENST00000456948 ANKRD20A12PQ8NF67 263 aa24.41■■□□□ 1.5
CBX3-204ENST00000456948 NDST4Q9H3R1 872 aa24.41■■□□□ 1.5
CBX3-204ENST00000456948 SPATA6Q9NWH7 488 aaPredicted RBP24.41■■□□□ 1.5
CBX3-204ENST00000456948 APEX2Q9UBZ4 518 aa24.41■■□□□ 1.5
CBX3-204ENST00000456948 NAGPAQ9UK23 515 aa24.41■■□□□ 1.5
CBX3-204ENST00000456948 SH3BP1Q9Y3L3 701 aa24.41■■□□□ 1.5
CBX3-204ENST00000456948 MTF2Q9Y483 593 aaPredicted RBP24.41■■□□□ 1.5
CBX3-204ENST00000456948 KCNJ18B7U540 433 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms