RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 ADGRD1Q6QNK2 874 aa19.19■□□□□ 0.66
SEMA3B-209ENST00000456560 FBXO36Q8NEA4 188 aa19.19■□□□□ 0.66
SEMA3B-209ENST00000456560 KHSRPQ92945 711 aaKnown RBP eCLIP19.19■□□□□ 0.66
SEMA3B-209ENST00000456560 SLC10A4Q96EP9 437 aa19.19■□□□□ 0.66
SEMA3B-209ENST00000456560 MAK16Q9BXY0 300 aaKnown RBP19.19■□□□□ 0.66
SEMA3B-209ENST00000456560 SLC4A5Q9BY07 1137 aa19.19■□□□□ 0.66
SEMA3B-209ENST00000456560 SSU72Q9NP77 194 aaKnown RBP19.19■□□□□ 0.66
SEMA3B-209ENST00000456560 SUFUQ9UMX1 484 aa19.19■□□□□ 0.66
SEMA3B-209ENST00000456560 DERAQ9Y315 318 aa19.19■□□□□ 0.66
SEMA3B-209ENST00000456560 ROR1Q01973 937 aa19.19■□□□□ 0.66
SEMA3B-209ENST00000456560 SPARCL1Q14515 664 aa19.19■□□□□ 0.66
SEMA3B-209ENST00000456560 DCAF4L1Q3SXM0 396 aa19.19■□□□□ 0.66
SEMA3B-209ENST00000456560 PPP1R26Q5T8A7 1209 aaPredicted RBP19.19■□□□□ 0.66
SEMA3B-209ENST00000456560 PMF1Q6P1K2 205 aa19.19■□□□□ 0.66
SEMA3B-209ENST00000456560 C3orf62Q6ZUJ4 267 aa19.19■□□□□ 0.66
SEMA3B-209ENST00000456560 C4orf33Q8N1A6 199 aa19.19■□□□□ 0.66
SEMA3B-209ENST00000456560 TAB3Q8N5C8 712 aaPredicted RBP19.19■□□□□ 0.66
SEMA3B-209ENST00000456560 RNF157Q96PX1 679 aa19.19■□□□□ 0.66
SEMA3B-209ENST00000456560 MRPL45Q9BRJ2 306 aaKnown RBP19.19■□□□□ 0.66
SEMA3B-209ENST00000456560 PLEKHA5Q9HAU0 1116 aa19.19■□□□□ 0.66
SEMA3B-209ENST00000456560 STRNO43815 780 aa19.18■□□□□ 0.66
SEMA3B-209ENST00000456560 PRPSAP2O60256 369 aa19.18■□□□□ 0.66
SEMA3B-209ENST00000456560 SMPD1P17405 629 aa19.18■□□□□ 0.66
SEMA3B-209ENST00000456560 IL4RP24394 825 aa19.18■□□□□ 0.66
SEMA3B-209ENST00000456560 HOXA11P31270 313 aaPredicted RBP19.18■□□□□ 0.66
SEMA3B-209ENST00000456560 RPA3P35244 121 aaPredicted RBP19.18■□□□□ 0.66
SEMA3B-209ENST00000456560 RGS7P49802 495 aa19.18■□□□□ 0.66
SEMA3B-209ENST00000456560 NRLP54845 237 aa19.18■□□□□ 0.66
SEMA3B-209ENST00000456560 RNASELQ05823 741 aaKnown RBP19.18■□□□□ 0.66
SEMA3B-209ENST00000456560 CBLBQ13191 982 aa19.18■□□□□ 0.66
SEMA3B-209ENST00000456560 ACVR2BQ13705 512 aa19.18■□□□□ 0.66
SEMA3B-209ENST00000456560 EFTUD2Q15029 972 aaKnown RBP eCLIP19.18■□□□□ 0.662e-7■■■□□ 16.4
SEMA3B-209ENST00000456560 RNF43Q68DV7 783 aa19.18■□□□□ 0.66
SEMA3B-209ENST00000456560 DARS2Q6PI48 645 aaKnown RBP19.18■□□□□ 0.66
SEMA3B-209ENST00000456560 OLFML1Q6UWY5 402 aa19.18■□□□□ 0.66
SEMA3B-209ENST00000456560 TTC30AQ86WT1 665 aa19.18■□□□□ 0.66
SEMA3B-209ENST00000456560 PDIK1LQ8N165 341 aa19.18■□□□□ 0.66
SEMA3B-209ENST00000456560 FBF1Q8TES7 1133 aa19.18■□□□□ 0.66
SEMA3B-209ENST00000456560 USP6NLQ92738 828 aa19.18■□□□□ 0.66
SEMA3B-209ENST00000456560 TBC1D31Q96DN5 1066 aa19.18■□□□□ 0.66
SEMA3B-209ENST00000456560 ADAMTS10Q9H324 1103 aa19.18■□□□□ 0.66
SEMA3B-209ENST00000456560 GGT7Q9UJ14 662 aa19.18■□□□□ 0.66
SEMA3B-209ENST00000456560 GRID1Q9ULK0 1009 aa19.18■□□□□ 0.66
SEMA3B-209ENST00000456560 NME7Q9Y5B8 376 aa19.18■□□□□ 0.66
SEMA3B-209ENST00000456560 PDHXO00330 501 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 PPEF2O14830 753 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 GRAP2O75791 330 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 NPTXRO95502 500 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 MMP3P08254 477 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 SETSIPP0DME0 302 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 BNIP1Q12981 228 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 PDK2Q15119 407 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 SLC1A5Q15758 541 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 ZBTB6Q15916 424 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 KLHL38Q2WGJ6 581 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 BBS9Q3SYG4 887 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 TMEM110Q86TL2 294 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 GBP7Q8N8V2 638 aaPredicted RBP19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 MZB1Q8WU39 189 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 MRRFQ96E11 262 aaKnown RBP19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 ZMAT2Q96NC0 199 aaKnown RBP19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 PAIP2Q9BPZ3 127 aaKnown RBP19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 PITPNM3Q9BZ71 974 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 USP29Q9HBJ7 922 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 SLC45A1Q9Y2W3 748 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 GABBR2O75899 941 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 NCALDP61601 193 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 MGAT5Q09328 741 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 KCNJ11Q14654 390 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 PDK4Q16654 411 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 DUSP28Q4G0W2 176 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 BOLA3Q53S33 107 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 TBC1D1Q86TI0 1168 aaPredicted RBP19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 ACOT1Q86TX2 421 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 SLC35F5Q8WV83 523 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 TEKT4Q8WW24 435 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 MORF4L1Q9UBU8 362 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 STARD13Q9Y3M8 1113 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 TRIP11Q15643 1979 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 SCN1AP35498 2009 aa19.17■□□□□ 0.66
SEMA3B-209ENST00000456560 KIF1CO43896 1103 aaKnown RBP19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 BASP1P80723 227 aaKnown RBP19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 SLC6A3Q01959 620 aa19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 CDO1Q16878 200 aa19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 ZC3H18Q86VM9 953 aaKnown RBP19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 IGDCC3Q8IVU1 814 aa19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 MAP7D3Q8IWC1 876 aa19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 PALM2Q8IXS6 379 aa19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 FITM2Q8N6M3 262 aa19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 PQLC3Q8N755 202 aa19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 PLD5Q8N7P1 536 aa19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 DCAKDQ8WVC6 231 aa19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 SNX27Q96L92 541 aa19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 RMDN2Q96LZ7 410 aa19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 PAFAH2Q99487 392 aa19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 RXFP1Q9HBX9 757 aa19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 SNTG2Q9NY99 539 aa19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 RALGAPA2Q2PPJ7 1873 aa19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 CFAP73A6NFT4 308 aa19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 CA4P22748 312 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms