RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 GTSE1Q9NYZ3 720 aa18.33■□□□□ 0.52
USP39-208ENST00000455732 ARHGAP26Q9UNA1 814 aa18.33■□□□□ 0.52
USP39-208ENST00000455732 FAM186AA6NE01 2351 aa18.33■□□□□ 0.52
USP39-208ENST00000455732 NCAM2O15394 837 aa18.32■□□□□ 0.52
USP39-208ENST00000455732 OAS1P00973 400 aaKnown RBP18.32■□□□□ 0.52
USP39-208ENST00000455732 PAEPP09466 180 aa18.32■□□□□ 0.52
USP39-208ENST00000455732 TUBP50607 506 aa18.32■□□□□ 0.52
USP39-208ENST00000455732 USP4Q13107 963 aa18.32■□□□□ 0.52
USP39-208ENST00000455732 ZNF77Q15935 545 aa18.32■□□□□ 0.52
USP39-208ENST00000455732 MAN2A1Q16706 1144 aa18.32■□□□□ 0.52
USP39-208ENST00000455732 ARHGEF19Q8IW93 802 aa18.32■□□□□ 0.52
USP39-208ENST00000455732 MAML2Q8IZL2 1156 aaPredicted RBP18.32■□□□□ 0.52
USP39-208ENST00000455732 ARL14EPQ8N8R7 260 aaPredicted RBP18.32■□□□□ 0.52
USP39-208ENST00000455732 ENOX1Q8TC92 643 aaKnown RBP18.32■□□□□ 0.52
USP39-208ENST00000455732 JAKMIP2Q96AA8 810 aa18.32■□□□□ 0.52
USP39-208ENST00000455732 MSANTD3Q96H12 275 aa18.32■□□□□ 0.52
USP39-208ENST00000455732 CYP2S1Q96SQ9 504 aa18.32■□□□□ 0.52
USP39-208ENST00000455732 C8orf33Q9H7E9 229 aaPredicted RBP18.32■□□□□ 0.52
USP39-208ENST00000455732 THG1LQ9NWX6 298 aaKnown RBP18.32■□□□□ 0.52
USP39-208ENST00000455732 KIAA1257Q9ULG3 409 aa18.32■□□□□ 0.52
USP39-208ENST00000455732 NDRG2Q9UN36 371 aaKnown RBP18.32■□□□□ 0.52
USP39-208ENST00000455732 MYO16Q9Y6X6 1858 aa18.32■□□□□ 0.52
USP39-208ENST00000455732 ATG2BQ96BY7 2078 aa18.32■□□□□ 0.52
USP39-208ENST00000455732 VDRP11473 427 aa18.31■□□□□ 0.52
USP39-208ENST00000455732 PRKCSHP14314 528 aaPredicted RBP18.31■□□□□ 0.52
USP39-208ENST00000455732 HDCP19113 662 aa18.31■□□□□ 0.52
USP39-208ENST00000455732 MTIF2P46199 727 aaKnown RBP18.31■□□□□ 0.52
USP39-208ENST00000455732 SOX9P48436 509 aa18.31■□□□□ 0.52
USP39-208ENST00000455732 ZNF132P52740 706 aa18.31■□□□□ 0.52
USP39-208ENST00000455732 SLC7A9P82251 487 aa18.31■□□□□ 0.52
USP39-208ENST00000455732 TNK2Q07912 1038 aa18.31■□□□□ 0.52
USP39-208ENST00000455732 IFRD2Q12894 506 aaPredicted RBP18.31■□□□□ 0.52
USP39-208ENST00000455732 SGO2Q562F6 1265 aa18.31■□□□□ 0.52
USP39-208ENST00000455732 SMYD5Q6GMV2 418 aa18.31■□□□□ 0.52
USP39-208ENST00000455732 C1orf228Q6PIY5 440 aa18.31■□□□□ 0.52
USP39-208ENST00000455732 GPRIN1Q7Z2K8 1008 aa18.31■□□□□ 0.52
USP39-208ENST00000455732 KIAA1958Q8N8K9 716 aa18.31■□□□□ 0.52
USP39-208ENST00000455732 ANKRD52Q8NB46 1076 aa18.31■□□□□ 0.52
USP39-208ENST00000455732 KAT5Q92993 513 aa18.31■□□□□ 0.52
USP39-208ENST00000455732 UBXN6Q9BZV1 441 aa18.31■□□□□ 0.52
USP39-208ENST00000455732 GKN1Q9NS71 199 aa18.31■□□□□ 0.52
USP39-208ENST00000455732 ANO10Q9NW15 660 aa18.31■□□□□ 0.52
USP39-208ENST00000455732 SCML2Q9UQR0 700 aa18.31■□□□□ 0.52
USP39-208ENST00000455732 PTPRZ1P23471 2315 aaPredicted RBP18.31■□□□□ 0.52
USP39-208ENST00000455732 SPECC1L-ADORA2AF8WAN1 911 aa18.3■□□□□ 0.52
USP39-208ENST00000455732 CTHP32929 405 aa18.3■□□□□ 0.52
USP39-208ENST00000455732 KPNA1P52294 538 aaPredicted RBP18.3■□□□□ 0.52
USP39-208ENST00000455732 STX1AQ16623 288 aa18.3■□□□□ 0.52
USP39-208ENST00000455732 EXOC3L4Q17RC7 722 aa18.3■□□□□ 0.52
USP39-208ENST00000455732 TRIM65Q6PJ69 517 aa18.3■□□□□ 0.52
USP39-208ENST00000455732 TXNDC11Q6PKC3 985 aa18.3■□□□□ 0.52
USP39-208ENST00000455732 TMEM270Q6UE05 265 aa18.3■□□□□ 0.52
USP39-208ENST00000455732 SASS6Q6UVJ0 657 aa18.3■□□□□ 0.52
USP39-208ENST00000455732 GBP6Q6ZN66 633 aa18.3■□□□□ 0.52
USP39-208ENST00000455732 ENOSF1Q7L5Y1 443 aa18.3■□□□□ 0.52
USP39-208ENST00000455732 RALGPS2Q86X27 583 aaPredicted RBP18.3■□□□□ 0.52
USP39-208ENST00000455732 CREBRFQ8IUR6 639 aa18.3■□□□□ 0.52
USP39-208ENST00000455732 FAM81BQ96LP2 452 aa18.3■□□□□ 0.52
USP39-208ENST00000455732 KREMEN1Q96MU8 473 aa18.3■□□□□ 0.52
USP39-208ENST00000455732 HPS4Q9NQG7 708 aa18.3■□□□□ 0.52
USP39-208ENST00000455732 SPATA6Q9NWH7 488 aaPredicted RBP18.3■□□□□ 0.52
USP39-208ENST00000455732 GMIPQ9P107 970 aa18.3■□□□□ 0.52
USP39-208ENST00000455732 CNTN6Q9UQ52 1028 aa18.3■□□□□ 0.52
USP39-208ENST00000455732 NFE2L3Q9Y4A8 694 aa18.3■□□□□ 0.52
USP39-208ENST00000455732 USP3Q9Y6I4 520 aa18.3■□□□□ 0.52
USP39-208ENST00000455732 MYOFQ9NZM1 2061 aa18.3■□□□□ 0.52
USP39-208ENST00000455732 O00370 1275 aa18.29■□□□□ 0.52
USP39-208ENST00000455732 SP9P0CG40 484 aa18.29■□□□□ 0.52
USP39-208ENST00000455732 CHRNB1P11230 501 aa18.29■□□□□ 0.52
USP39-208ENST00000455732 EEF1GP26641 437 aaKnown RBP18.29■□□□□ 0.52
USP39-208ENST00000455732 KIF11P52732 1056 aa18.29■□□□□ 0.52
USP39-208ENST00000455732 BCAT1P54687 386 aa18.29■□□□□ 0.52
USP39-208ENST00000455732 SLC8A3P57103 927 aa18.29■□□□□ 0.52
USP39-208ENST00000455732 MTF1Q14872 753 aa18.29■□□□□ 0.52
USP39-208ENST00000455732 ITPRIPL2Q3MIP1 535 aa18.29■□□□□ 0.52
USP39-208ENST00000455732 MIIPQ5JXC2 388 aa18.29■□□□□ 0.52
USP39-208ENST00000455732 RRAGAQ7L523 313 aa18.29■□□□□ 0.52
USP39-208ENST00000455732 TTC30AQ86WT1 665 aa18.29■□□□□ 0.52
USP39-208ENST00000455732 TTC8Q8TAM2 541 aa18.29■□□□□ 0.52
USP39-208ENST00000455732 SH3RF2Q8TEC5 729 aa18.29■□□□□ 0.52
USP39-208ENST00000455732 TUBGCP2Q9BSJ2 902 aa18.29■□□□□ 0.52
USP39-208ENST00000455732 CHRDQ9H2X0 955 aa18.29■□□□□ 0.52
USP39-208ENST00000455732 TMEM63CQ9P1W3 806 aa18.29■□□□□ 0.52
USP39-208ENST00000455732 APEX2Q9UBZ4 518 aa18.29■□□□□ 0.52
USP39-208ENST00000455732 TSPAN16Q9UKR8 245 aa18.29■□□□□ 0.52
USP39-208ENST00000455732 PCDHB4Q9Y5E5 795 aa18.29■□□□□ 0.52
USP39-208ENST00000455732 PRR23AA6NEV1 266 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 OTOL1A6NHN0 477 aaPredicted RBP18.28■□□□□ 0.52
USP39-208ENST00000455732 KCNJ18B7U540 433 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 CD19P15391 556 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 ZXDBP98169 803 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 RUNX3Q13761 415 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 KCNJ12Q14500 433 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 PDGFRLQ15198 375 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 STILQ15468 1287 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 GOLGA7BQ2TAP0 167 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 VWA3BQ502W6 1294 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 TCP11X2Q5H9J9 407 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 RAB41Q5JT25 222 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 HECTD3Q5T447 861 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms