RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 LRMPQ12912 555 aa12.53□□□□□ -0.4
TMEM56-202ENST00000455656 CCINQ13939 588 aa12.53□□□□□ -0.4
TMEM56-202ENST00000455656 GAB4Q2WGN9 574 aa12.53□□□□□ -0.4
TMEM56-202ENST00000455656 ITPRIPL2Q3MIP1 535 aa12.53□□□□□ -0.4
TMEM56-202ENST00000455656 NAIF1Q69YI7 327 aaPredicted RBP12.53□□□□□ -0.4
TMEM56-202ENST00000455656 TTC30AQ86WT1 665 aa12.53□□□□□ -0.4
TMEM56-202ENST00000455656 PDZD8Q8NEN9 1154 aa12.53□□□□□ -0.4
TMEM56-202ENST00000455656 GPT2Q8TD30 523 aa12.53□□□□□ -0.4
TMEM56-202ENST00000455656 OSCP1Q8WVF1 389 aa12.53□□□□□ -0.4
TMEM56-202ENST00000455656 NELL1Q92832 810 aa12.53□□□□□ -0.4
TMEM56-202ENST00000455656 ATOH1Q92858 354 aaPredicted RBP12.53□□□□□ -0.4
TMEM56-202ENST00000455656 DUSP16Q9BY84 665 aa12.53□□□□□ -0.4
TMEM56-202ENST00000455656 LINC00597Q9H2U6 94 aa12.53□□□□□ -0.4
TMEM56-202ENST00000455656 CCSER2Q9H7U1 834 aa12.53□□□□□ -0.4
TMEM56-202ENST00000455656 LMAN1LQ9HAT1 526 aa12.53□□□□□ -0.4
TMEM56-202ENST00000455656 NMUR1Q9HB89 426 aa12.53□□□□□ -0.4
TMEM56-202ENST00000455656 PRMT8Q9NR22 394 aaPredicted RBP12.53□□□□□ -0.4
TMEM56-202ENST00000455656 RBM12Q9NTZ6 932 aaKnown RBP12.53□□□□□ -0.4
TMEM56-202ENST00000455656 THG1LQ9NWX6 298 aaKnown RBP12.53□□□□□ -0.4
TMEM56-202ENST00000455656 OSER1Q9NX31 292 aa12.53□□□□□ -0.4
TMEM56-202ENST00000455656 MRPS17Q9Y2R5 130 aaKnown RBP12.53□□□□□ -0.4
TMEM56-202ENST00000455656 CPQQ9Y646 472 aa12.53□□□□□ -0.4
TMEM56-202ENST00000455656 WNT6Q9Y6F9 365 aa12.53□□□□□ -0.4
TMEM56-202ENST00000455656 USP3Q9Y6I4 520 aa12.53□□□□□ -0.4
TMEM56-202ENST00000455656 ATG2BQ96BY7 2078 aa12.52□□□□□ -0.4
TMEM56-202ENST00000455656 RNF225M0QZC1 329 aaPredicted RBP12.52□□□□□ -0.41
TMEM56-202ENST00000455656 P4HA2O15460 535 aa12.52□□□□□ -0.41
TMEM56-202ENST00000455656 SP9P0CG40 484 aa12.52□□□□□ -0.41
TMEM56-202ENST00000455656 GJA4P35212 333 aa12.52□□□□□ -0.41
TMEM56-202ENST00000455656 TUBP50607 506 aa12.52□□□□□ -0.41
TMEM56-202ENST00000455656 KPNA1P52294 538 aaPredicted RBP12.52□□□□□ -0.41
TMEM56-202ENST00000455656 KIF11P52732 1056 aa12.52□□□□□ -0.41
TMEM56-202ENST00000455656 MTAPQ13126 283 aa12.52□□□□□ -0.41
TMEM56-202ENST00000455656 PON2Q15165 354 aa12.52□□□□□ -0.41
TMEM56-202ENST00000455656 PDGFRLQ15198 375 aa12.52□□□□□ -0.41
TMEM56-202ENST00000455656 DPCR1Q3MIW9 517 aa12.52□□□□□ -0.41
TMEM56-202ENST00000455656 C1orf228Q6PIY5 440 aa12.52□□□□□ -0.41
TMEM56-202ENST00000455656 ARHGEF19Q8IW93 802 aa12.52□□□□□ -0.41
TMEM56-202ENST00000455656 TTC39CQ8N584 583 aa12.52□□□□□ -0.41
TMEM56-202ENST00000455656 KIAA1958Q8N8K9 716 aa12.52□□□□□ -0.41
TMEM56-202ENST00000455656 EZH1Q92800 747 aaPredicted RBP12.52□□□□□ -0.41
TMEM56-202ENST00000455656 WBP2Q969T9 261 aa12.52□□□□□ -0.41
TMEM56-202ENST00000455656 HEXIM2Q96MH2 286 aaKnown RBP12.52□□□□□ -0.41
TMEM56-202ENST00000455656 ZSWIM1Q9BR11 485 aa12.52□□□□□ -0.41
TMEM56-202ENST00000455656 ECT2Q9H8V3 914 aa12.52□□□□□ -0.41
TMEM56-202ENST00000455656 FBRSL1Q9HCM7 1045 aaKnown RBP12.52□□□□□ -0.41
TMEM56-202ENST00000455656 DUS2Q9NX74 493 aaKnown RBP12.52□□□□□ -0.41
TMEM56-202ENST00000455656 SCML2Q9UQR0 700 aa12.52□□□□□ -0.41
TMEM56-202ENST00000455656 EML5Q05BV3 1969 aa12.52□□□□□ -0.41
TMEM56-202ENST00000455656 TULP2O00295 520 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 TRDMT1O14717 391 aaKnown RBP12.51□□□□□ -0.41
TMEM56-202ENST00000455656 NCAM2O15394 837 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 CYP26A1O43174 497 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 GREM1O60565 184 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 GNA14O95837 355 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 ABL1P00519 1130 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 PDE6CP51160 858 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 PKDCCQ504Y2 493 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 TMEM196Q5HYL7 178 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 RAB41Q5JT25 222 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 FSTL4Q6MZW2 842 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 MAMSTRQ6ZN01 415 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 Q6ZS52 159 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 BHLHA9Q7RTU4 235 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 SCD5Q86SK9 330 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 MLKLQ8NB16 471 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 EHBP1Q8NDI1 1231 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 JAKMIP2Q96AA8 810 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 KREMEN1Q96MU8 473 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 NUP62CLQ9H1M0 184 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 FBXO44Q9H4M3 255 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 CYLDQ9NQC7 956 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 SPATA6Q9NWH7 488 aaPredicted RBP12.51□□□□□ -0.41
TMEM56-202ENST00000455656 C2orf42Q9NWW7 574 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 SMPD4Q9NXE4 827 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 FBXO4Q9UKT5 387 aa12.51□□□□□ -0.41
TMEM56-202ENST00000455656 O00370 1275 aa12.5□□□□□ -0.41
TMEM56-202ENST00000455656 GABBR2O75899 941 aa12.5□□□□□ -0.41
TMEM56-202ENST00000455656 CALCAP01258 141 aa12.5□□□□□ -0.41
TMEM56-202ENST00000455656 AFPP02771 609 aaKnown RBP12.5□□□□□ -0.41
TMEM56-202ENST00000455656 MBL2P11226 248 aaPredicted RBP12.5□□□□□ -0.41
TMEM56-202ENST00000455656 TBXAS1P24557 533 aaPredicted RBP12.5□□□□□ -0.41
TMEM56-202ENST00000455656 HOXC13P31276 330 aa12.5□□□□□ -0.41
TMEM56-202ENST00000455656 ZNF132P52740 706 aa12.5□□□□□ -0.41
TMEM56-202ENST00000455656 ZNF528Q3MIS6 628 aa12.5□□□□□ -0.41
TMEM56-202ENST00000455656 HECTD3Q5T447 861 aa12.5□□□□□ -0.41
TMEM56-202ENST00000455656 PKN3Q6P5Z2 889 aa12.5□□□□□ -0.41
TMEM56-202ENST00000455656 RBM43Q6ZSC3 357 aaKnown RBP12.5□□□□□ -0.41
TMEM56-202ENST00000455656 ASCL5Q7RTU5 278 aa12.5□□□□□ -0.41
TMEM56-202ENST00000455656 CCDC186Q7Z3E2 898 aa12.5□□□□□ -0.41
TMEM56-202ENST00000455656 ANKRD52Q8NB46 1076 aa12.5□□□□□ -0.41
TMEM56-202ENST00000455656 TFAP2BQ92481 460 aa12.5□□□□□ -0.41
TMEM56-202ENST00000455656 ATP2A3Q93084 1043 aa12.5□□□□□ -0.41
TMEM56-202ENST00000455656 CNOT6LQ96LI5 555 aaKnown RBP12.5□□□□□ -0.41
TMEM56-202ENST00000455656 NT5C1BQ96P26 610 aa12.5□□□□□ -0.41
TMEM56-202ENST00000455656 IPO9Q96P70 1041 aaKnown RBP12.5□□□□□ -0.41
TMEM56-202ENST00000455656 IER2Q9BTL4 223 aa12.5□□□□□ -0.41
TMEM56-202ENST00000455656 UBXN6Q9BZV1 441 aa12.5□□□□□ -0.41
TMEM56-202ENST00000455656 TSPAN16Q9UKR8 245 aa12.5□□□□□ -0.41
TMEM56-202ENST00000455656 CNTN6Q9UQ52 1028 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms