RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 APOBEC3GQ9HC16 384 aaKnown RBP17.05■□□□□ 0.32
GPC1-206ENST00000455111 CFAP97Q9P2B7 532 aa17.05■□□□□ 0.32
GPC1-206ENST00000455111 CGNQ9P2M7 1197 aaKnown RBP17.05■□□□□ 0.32
GPC1-206ENST00000455111 EBF1Q9UH73 591 aa17.05■□□□□ 0.32
GPC1-206ENST00000455111 R3HCC1Q9Y3T6 440 aaKnown RBP17.05■□□□□ 0.32
GPC1-206ENST00000455111 KMT2BQ9UMN6 2715 aaPredicted RBP17.05■□□□□ 0.32
GPC1-206ENST00000455111 FAM237AA0A1B0GTK4 181 aa17.04■□□□□ 0.32
GPC1-206ENST00000455111 AKAP3O75969 853 aa17.04■□□□□ 0.32
GPC1-206ENST00000455111 NFATC1O95644 943 aa17.04■□□□□ 0.32
GPC1-206ENST00000455111 ADRB1P08588 477 aa17.04■□□□□ 0.32
GPC1-206ENST00000455111 ZNF806P0C7X5 589 aa17.04■□□□□ 0.32
GPC1-206ENST00000455111 ASPAP45381 313 aa17.04■□□□□ 0.32
GPC1-206ENST00000455111 SLC5A3P53794 718 aa17.04■□□□□ 0.32
GPC1-206ENST00000455111 PSMD2Q13200 908 aa17.04■□□□□ 0.32
GPC1-206ENST00000455111 C2orf27AQ580R0 203 aa17.04■□□□□ 0.32
GPC1-206ENST00000455111 SNX30Q5VWJ9 437 aa17.04■□□□□ 0.32
GPC1-206ENST00000455111 SV2AQ7L0J3 742 aa17.04■□□□□ 0.32
GPC1-206ENST00000455111 C12orf29Q8N999 325 aa17.04■□□□□ 0.32
GPC1-206ENST00000455111 LOXL4Q96JB6 756 aa17.04■□□□□ 0.32
GPC1-206ENST00000455111 TPSD1Q9BZJ3 242 aa17.04■□□□□ 0.32
GPC1-206ENST00000455111 OSER1Q9NX31 292 aa17.04■□□□□ 0.32
GPC1-206ENST00000455111 GMIPQ9P107 970 aa17.04■□□□□ 0.32
GPC1-206ENST00000455111 SPTBN2O15020 2390 aa17.04■□□□□ 0.32
GPC1-206ENST00000455111 HHLA1C9JL84 531 aa17.03■□□□□ 0.32
GPC1-206ENST00000455111 TRIM24O15164 1050 aa17.03■□□□□ 0.32
GPC1-206ENST00000455111 ABL1P00519 1130 aa17.03■□□□□ 0.32
GPC1-206ENST00000455111 NR3C1P04150 777 aa17.03■□□□□ 0.32
GPC1-206ENST00000455111 CCDC192P0DO97 292 aa17.03■□□□□ 0.32
GPC1-206ENST00000455111 SDHBP21912 280 aa17.03■□□□□ 0.32
GPC1-206ENST00000455111 YWHAQP27348 245 aa17.03■□□□□ 0.32
GPC1-206ENST00000455111 KIR2DL1P43626 348 aaPredicted RBP17.03■□□□□ 0.32
GPC1-206ENST00000455111 AMPD2Q01433 879 aa17.03■□□□□ 0.32
GPC1-206ENST00000455111 BIRC3Q13489 604 aa17.03■□□□□ 0.32
GPC1-206ENST00000455111 ZNF667Q5HYK9 610 aa17.03■□□□□ 0.32
GPC1-206ENST00000455111 PPM1JQ5JR12 505 aa17.03■□□□□ 0.32
GPC1-206ENST00000455111 ATL3Q6DD88 541 aa17.03■□□□□ 0.32
GPC1-206ENST00000455111 HSCBQ8IWL3 235 aa17.03■□□□□ 0.32
GPC1-206ENST00000455111 CCDC33Q8N5R6 958 aa17.03■□□□□ 0.32
GPC1-206ENST00000455111 FRMD1Q8N878 549 aa17.03■□□□□ 0.32
GPC1-206ENST00000455111 MDGA1Q8NFP4 955 aa17.03■□□□□ 0.32
GPC1-206ENST00000455111 WHAMMQ8TF30 809 aa17.03■□□□□ 0.32
GPC1-206ENST00000455111 FBXO32Q969P5 355 aa17.03■□□□□ 0.32
GPC1-206ENST00000455111 GOLPH3LQ9H4A5 285 aa17.03■□□□□ 0.32
GPC1-206ENST00000455111 CSNK1G1Q9HCP0 422 aa17.03■□□□□ 0.32
GPC1-206ENST00000455111 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.03■□□□□ 0.32
GPC1-206ENST00000455111 CEP192Q8TEP8 1941 aa17.03■□□□□ 0.32
GPC1-206ENST00000455111 A0A0A0MRY4 1105 aa17.02■□□□□ 0.32
GPC1-206ENST00000455111 SGK1O00141 431 aa17.02■□□□□ 0.32
GPC1-206ENST00000455111 PDXKO00764 312 aa17.02■□□□□ 0.32
GPC1-206ENST00000455111 ADAM23O75077 832 aa17.02■□□□□ 0.32
GPC1-206ENST00000455111 PHACTR2O75167 634 aa17.02■□□□□ 0.32
GPC1-206ENST00000455111 APBB3O95704 486 aa17.02■□□□□ 0.32
GPC1-206ENST00000455111 ASS1P00966 412 aaKnown RBP17.02■□□□□ 0.32
GPC1-206ENST00000455111 MBL2P11226 248 aaPredicted RBP17.02■□□□□ 0.32
GPC1-206ENST00000455111 CMA1P23946 247 aa17.02■□□□□ 0.32
GPC1-206ENST00000455111 MPLP40238 635 aa17.02■□□□□ 0.32
GPC1-206ENST00000455111 PPP3CCP48454 512 aa17.02■□□□□ 0.32
GPC1-206ENST00000455111 NDUFA8P51970 172 aa17.02■□□□□ 0.32
GPC1-206ENST00000455111 NDST1P52848 882 aa17.02■□□□□ 0.32
GPC1-206ENST00000455111 PPP3CAQ08209 521 aa17.02■□□□□ 0.32
GPC1-206ENST00000455111 LY6G5CQ5SRR4 150 aa17.02■□□□□ 0.32
GPC1-206ENST00000455111 BBS7Q8IWZ6 715 aa17.02■□□□□ 0.32
GPC1-206ENST00000455111 ETFBKMTQ8IXQ9 262 aa17.02■□□□□ 0.32
GPC1-206ENST00000455111 CRYBG2Q8N1P7 616 aa17.02■□□□□ 0.32
GPC1-206ENST00000455111 KIAA1958Q8N8K9 716 aa17.02■□□□□ 0.32
GPC1-206ENST00000455111 IL17RCQ8NAC3 791 aa17.02■□□□□ 0.32
GPC1-206ENST00000455111 SLC2A14Q8TDB8 520 aa17.02■□□□□ 0.32
GPC1-206ENST00000455111 KRT82Q9NSB4 513 aa17.02■□□□□ 0.32
GPC1-206ENST00000455111 MMP17Q9ULZ9 603 aa17.02■□□□□ 0.32
GPC1-206ENST00000455111 ZFHX4Q86UP3 3567 aa17.01■□□□□ 0.31
GPC1-206ENST00000455111 AP1G2O75843 785 aa17.01■□□□□ 0.31
GPC1-206ENST00000455111 TBX18O95935 607 aa17.01■□□□□ 0.31
GPC1-206ENST00000455111 HLA-DRAP01903 254 aa17.01■□□□□ 0.31
GPC1-206ENST00000455111 RPN1P04843 607 aaKnown RBP17.01■□□□□ 0.31
GPC1-206ENST00000455111 TRIM49P0CI25 452 aa17.01■□□□□ 0.31
GPC1-206ENST00000455111 TRIM49CP0CI26 452 aa17.01■□□□□ 0.31
GPC1-206ENST00000455111 PDE6CP51160 858 aa17.01■□□□□ 0.31
GPC1-206ENST00000455111 LIMK1P53667 647 aa17.01■□□□□ 0.31
GPC1-206ENST00000455111 KDSRQ06136 332 aa17.01■□□□□ 0.31
GPC1-206ENST00000455111 DPYDQ12882 1025 aa17.01■□□□□ 0.31
GPC1-206ENST00000455111 CRY1Q16526 586 aa17.01■□□□□ 0.31
GPC1-206ENST00000455111 CEP57L1Q8IYX8 460 aa17.01■□□□□ 0.31
GPC1-206ENST00000455111 ALLCQ8N6M5 410 aa17.01■□□□□ 0.31
GPC1-206ENST00000455111 OLIG1Q8TAK6 271 aa17.01■□□□□ 0.31
GPC1-206ENST00000455111 TMC2Q8TDI7 906 aa17.01■□□□□ 0.31
GPC1-206ENST00000455111 OVCA2Q8WZ82 227 aa17.01■□□□□ 0.31
GPC1-206ENST00000455111 SLITRK1Q96PX8 696 aa17.01■□□□□ 0.31
GPC1-206ENST00000455111 NMUR1Q9HB89 426 aa17.01■□□□□ 0.31
GPC1-206ENST00000455111 DMAP1Q9NPF5 467 aaPredicted RBP17.01■□□□□ 0.31
GPC1-206ENST00000455111 FAM49BQ9NUQ9 324 aa17.01■□□□□ 0.31
GPC1-206ENST00000455111 EXOC1Q9NV70 894 aa17.01■□□□□ 0.31
GPC1-206ENST00000455111 CFAP45Q9UL16 551 aa17.01■□□□□ 0.31
GPC1-206ENST00000455111 TRAF3IP3Q9Y228 551 aa17.01■□□□□ 0.31
GPC1-206ENST00000455111 MYO18AQ92614 2054 aaKnown RBP17.01■□□□□ 0.31
GPC1-206ENST00000455111 RTN3O95197 1032 aaPredicted RBP17■□□□□ 0.31
GPC1-206ENST00000455111 KAT7O95251 611 aa17■□□□□ 0.31
GPC1-206ENST00000455111 DGKEP52429 567 aa17■□□□□ 0.31
GPC1-206ENST00000455111 AP3M2P53677 418 aa17■□□□□ 0.31
GPC1-206ENST00000455111 MCCD1P59942 119 aaPredicted RBP17■□□□□ 0.31
GPC1-206ENST00000455111 NR1H3Q13133 447 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms