RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 ADGRF2Q8IZF7 708 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 UBE2Q2Q8WVN8 375 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 WBP2Q969T9 261 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 CCDC34Q96HJ3 373 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 ANKRD36BP1Q96IX9 119 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 RAD9AQ99638 391 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 NMUR1Q9HB89 426 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 LRRC4CQ9HCJ2 640 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 ALG13Q9NP73 1137 aaKnown RBP5.24□□□□□ -1.57
RIF1-207ENST00000454583 CD160O95971 181 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 ACRP10323 421 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 BRD2P25440 801 aaKnown RBP5.24□□□□□ -1.57
RIF1-207ENST00000454583 CASQ1P31415 396 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 IRS1P35568 1242 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 BMPR1AP36894 532 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 PIK3CAP42336 1068 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 DAOAP59103 153 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 RPL7AP62424 266 aaKnown RBP5.24□□□□□ -1.57
RIF1-207ENST00000454583 NNTQ13423 1086 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 ZNF268Q14587 947 aaPredicted RBP5.24□□□□□ -1.57
RIF1-207ENST00000454583 DUSP6Q16828 381 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 FILIP1LQ4L180 1135 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 SFMBT2Q5VUG0 894 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 SLC9A4Q6AI14 798 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 RHBDF2Q6PJF5 856 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 KCNT2Q6UVM3 1135 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 MMS22LQ6ZRQ5 1243 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 IQCKQ8N0W5 287 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 TTC39CQ8N584 583 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 ALG14Q96F25 216 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 RPGRIP1Q96KN7 1286 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 FCRL2Q96LA5 508 aaPredicted RBP5.24□□□□□ -1.57
RIF1-207ENST00000454583 NT5C1BQ96P26 610 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 KLHL5Q96PQ7 755 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 MRPL9Q9BYD2 267 aaKnown RBP5.24□□□□□ -1.57
RIF1-207ENST00000454583 NOL6Q9H6R4 1146 aaKnown RBP5.24□□□□□ -1.57
RIF1-207ENST00000454583 ZNF334Q9HCZ1 680 aaPredicted RBP5.24□□□□□ -1.57
RIF1-207ENST00000454583 LMCD1Q9NZU5 365 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 HESX1Q9UBX0 185 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 FBXO10Q9UK96 956 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 TSPAN16Q9UKR8 245 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 OR51B4Q9Y5P0 310 aa5.24□□□□□ -1.57
RIF1-207ENST00000454583 SF3B1O75533 1304 aaKnown RBP eCLIP5.23□□□□□ -1.579e-6■■■■■ 87.9
RIF1-207ENST00000454583 HIDE1A8MVS5 230 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 SRGAP2O75044 1071 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 POMCP01189 267 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 KRT18P05783 430 aaKnown RBP5.23□□□□□ -1.57
RIF1-207ENST00000454583 CCDC130P13994 396 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 MTIF2P46199 727 aaKnown RBP5.23□□□□□ -1.57
RIF1-207ENST00000454583 GPR15P49685 360 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 TAS2R40P59535 323 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 KRT83P78385 493 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 DMTNQ08495 405 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 IKBKEQ14164 716 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 TAF5Q15542 800 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 UAP1Q16222 522 aaPredicted RBP5.23□□□□□ -1.57
RIF1-207ENST00000454583 DCAF17Q5H9S7 520 aaPredicted RBP5.23□□□□□ -1.57
RIF1-207ENST00000454583 SPDYCQ5MJ68 293 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 SH3PXD2AQ5TCZ1 1133 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 ALG1LQ6GMV1 187 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 TRIM72Q6ZMU5 477 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 AGGF1Q8N302 714 aaeCLIP5.23□□□□□ -1.57
RIF1-207ENST00000454583 TMEM199Q8N511 208 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 CCDC127Q96BQ5 260 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 RPS6KC1Q96S38 1066 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 KCNK16Q96T55 309 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 WDR83Q9BRX9 315 aaKnown RBP5.23□□□□□ -1.57
RIF1-207ENST00000454583 MAGEB5Q9BZ81 275 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 PDFQ9HBH1 243 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 TMEM39AQ9NV64 488 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 STK39Q9UEW8 545 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 TCEAL9Q9UHQ7 104 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 VPS13AQ96RL7 3174 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 LRCH4O75427 683 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 DAB1O75553 588 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 DLATP10515 647 aaKnown RBP5.23□□□□□ -1.57
RIF1-207ENST00000454583 HOXB3P14651 431 aaPredicted RBP5.23□□□□□ -1.57
RIF1-207ENST00000454583 ATF2P15336 505 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 LHX1P48742 406 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 MARCKSL1P49006 195 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 OSTNP61366 133 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 ADGRE1Q14246 886 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 LRRC38Q5VT99 294 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 NADSYN1Q6IA69 706 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 ZDHHC24Q6UX98 284 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 ZDHHC17Q8IUH5 632 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 PQLC3Q8N755 202 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 CEP112Q8N8E3 955 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 MRPL43Q8N983 215 aaKnown RBP5.23□□□□□ -1.57
RIF1-207ENST00000454583 TRIM58Q8NG06 486 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 MYLPFQ96A32 169 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 B3GALT6Q96L58 329 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 HSFY1Q96LI6 401 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 LRRC3BQ96PB8 259 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 C17orf80Q9BSJ5 609 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 NEUROG2Q9H2A3 272 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 LZTFL1Q9NQ48 299 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 ST7Q9NRC1 585 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 DSEQ9UL01 958 aa5.23□□□□□ -1.57
RIF1-207ENST00000454583 HPCAL4Q9UM19 191 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms