RNA–Protein interactions for RNA: ENST00000454108.5

CALD1-212, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-212ENST00000454108 SMYD3Q9H7B4 428 aa16.69■□□□□ 0.26
CALD1-212ENST00000454108 SLC39A2Q9NP94 309 aa16.69■□□□□ 0.26
CALD1-212ENST00000454108 TBC1D14Q9P2M4 693 aa16.69■□□□□ 0.26
CALD1-212ENST00000454108 ZFHX4Q86UP3 3567 aa16.68■□□□□ 0.26
CALD1-212ENST00000454108 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.68■□□□□ 0.26
CALD1-212ENST00000454108 LNP1A1A4G5 178 aa16.68■□□□□ 0.26
CALD1-212ENST00000454108 ANTXRLA6NF34 631 aa16.68■□□□□ 0.26
CALD1-212ENST00000454108 KAT7O95251 611 aa16.68■□□□□ 0.26
CALD1-212ENST00000454108 KCNK5O95279 499 aa16.68■□□□□ 0.26
CALD1-212ENST00000454108 KLF8O95600 359 aaPredicted RBP16.68■□□□□ 0.26
CALD1-212ENST00000454108 BCKDHBP21953 392 aa16.68■□□□□ 0.26
CALD1-212ENST00000454108 CASP4P49662 377 aa16.68■□□□□ 0.26
CALD1-212ENST00000454108 KDSRQ06136 332 aa16.68■□□□□ 0.26
CALD1-212ENST00000454108 KNOP1Q1ED39 458 aaKnown RBP16.68■□□□□ 0.26
CALD1-212ENST00000454108 FOXD4L5Q5VV16 416 aaPredicted RBP16.68■□□□□ 0.26
CALD1-212ENST00000454108 PSAPL1Q6NUJ1 521 aa16.68■□□□□ 0.26
CALD1-212ENST00000454108 SCARA5Q6ZMJ2 495 aa16.68■□□□□ 0.26
CALD1-212ENST00000454108 FAM35AQ86V20 835 aa16.68■□□□□ 0.26
CALD1-212ENST00000454108 C12orf40Q86WS4 652 aa16.68■□□□□ 0.26
CALD1-212ENST00000454108 SFTPA1Q8IWL2 248 aa16.68■□□□□ 0.26
CALD1-212ENST00000454108 TXNDC5Q8NBS9 432 aaKnown RBP16.68■□□□□ 0.26
CALD1-212ENST00000454108 FOXD4L4Q8WXT5 416 aaPredicted RBP16.68■□□□□ 0.26
CALD1-212ENST00000454108 MED10Q9BTT4 135 aa16.68■□□□□ 0.26
CALD1-212ENST00000454108 ARHGEF4Q9NR80 690 aa16.68■□□□□ 0.26
CALD1-212ENST00000454108 FAM13BQ9NYF5 915 aa16.68■□□□□ 0.26
CALD1-212ENST00000454108 MYO18AQ92614 2054 aaKnown RBP16.68■□□□□ 0.26
CALD1-212ENST00000454108 CEP192Q8TEP8 1941 aa16.67■□□□□ 0.26
CALD1-212ENST00000454108 PVALEFA0A1B0GWK0 134 aa16.67■□□□□ 0.26
CALD1-212ENST00000454108 E2F8A0AVK6 867 aa16.67■□□□□ 0.26
CALD1-212ENST00000454108 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.67■□□□□ 0.26
CALD1-212ENST00000454108 KHNYNO15037 678 aaKnown RBP16.67■□□□□ 0.26
CALD1-212ENST00000454108 COCHO43405 550 aa16.67■□□□□ 0.26
CALD1-212ENST00000454108 TIE1P35590 1138 aa16.67■□□□□ 0.26
CALD1-212ENST00000454108 SLC6A11P48066 632 aa16.67■□□□□ 0.26
CALD1-212ENST00000454108 SLC5A3P53794 718 aa16.67■□□□□ 0.26
CALD1-212ENST00000454108 SHC2P98077 582 aa16.67■□□□□ 0.26
CALD1-212ENST00000454108 MESP2Q0VG99 397 aa16.67■□□□□ 0.26
CALD1-212ENST00000454108 HSF5Q4G112 596 aaPredicted RBP16.67■□□□□ 0.26
CALD1-212ENST00000454108 ZNF667Q5HYK9 610 aa16.67■□□□□ 0.26
CALD1-212ENST00000454108 DAB2IPQ5VWQ8 1189 aa16.67■□□□□ 0.26
CALD1-212ENST00000454108 RHBDF2Q6PJF5 856 aa16.67■□□□□ 0.26
CALD1-212ENST00000454108 TMEM92Q6UXU6 159 aa16.67■□□□□ 0.26
CALD1-212ENST00000454108 IL17RCQ8NAC3 791 aa16.67■□□□□ 0.26
CALD1-212ENST00000454108 GOLGA5Q8TBA6 731 aa16.67■□□□□ 0.26
CALD1-212ENST00000454108 SMARCD1Q96GM5 515 aa16.67■□□□□ 0.26
CALD1-212ENST00000454108 TNIP3Q96KP6 325 aa16.67■□□□□ 0.26
CALD1-212ENST00000454108 SPACA7Q96KW9 195 aa16.67■□□□□ 0.26
CALD1-212ENST00000454108 KCNK16Q96T55 309 aa16.67■□□□□ 0.26
CALD1-212ENST00000454108 VRTNQ9H8Y1 702 aa16.67■□□□□ 0.26
CALD1-212ENST00000454108 POLMQ9NP87 494 aaPredicted RBP16.67■□□□□ 0.26
CALD1-212ENST00000454108 DMAP1Q9NPF5 467 aaPredicted RBP16.67■□□□□ 0.26
CALD1-212ENST00000454108 KRT82Q9NSB4 513 aa16.67■□□□□ 0.26
CALD1-212ENST00000454108 BCCIPQ9P287 314 aaKnown RBP eCLIP16.67■□□□□ 0.26
CALD1-212ENST00000454108 CIZ1Q9ULV3 898 aaPredicted RBP16.67■□□□□ 0.26
CALD1-212ENST00000454108 C4orf47A7E2U8 309 aa16.66■□□□□ 0.26
CALD1-212ENST00000454108 SGK1O00141 431 aa16.66■□□□□ 0.26
CALD1-212ENST00000454108 HNRNPLP14866 589 aaKnown RBP eCLIP16.66■□□□□ 0.26
CALD1-212ENST00000454108 GRIA2P42262 883 aa16.66■□□□□ 0.26
CALD1-212ENST00000454108 AFMP43652 599 aa16.66■□□□□ 0.26
CALD1-212ENST00000454108 ME1P48163 572 aa16.66■□□□□ 0.26
CALD1-212ENST00000454108 DHPSP49366 369 aaPredicted RBP16.66■□□□□ 0.26
CALD1-212ENST00000454108 TUBP50607 506 aa16.66■□□□□ 0.26
CALD1-212ENST00000454108 NOVA1P51513 510 aaKnown RBP16.66■□□□□ 0.26
CALD1-212ENST00000454108 AP3M2P53677 418 aa16.66■□□□□ 0.26
CALD1-212ENST00000454108 CDH8P55286 799 aa16.66■□□□□ 0.26
CALD1-212ENST00000454108 CUL4BQ13620 913 aa16.66■□□□□ 0.26
CALD1-212ENST00000454108 NCOA4Q13772 614 aa16.66■□□□□ 0.26
CALD1-212ENST00000454108 FOXD4L6Q3SYB3 417 aaPredicted RBP16.66■□□□□ 0.26
CALD1-212ENST00000454108 EOGTQ5NDL2 527 aa16.66■□□□□ 0.26
CALD1-212ENST00000454108 LY6G5CQ5SRR4 150 aa16.66■□□□□ 0.26
CALD1-212ENST00000454108 HECTD3Q5T447 861 aa16.66■□□□□ 0.26
CALD1-212ENST00000454108 FOXD4L3Q6VB84 417 aaPredicted RBP16.66■□□□□ 0.26
CALD1-212ENST00000454108 SCAMP5Q8TAC9 235 aa16.66■□□□□ 0.26
CALD1-212ENST00000454108 WHAMMQ8TF30 809 aa16.66■□□□□ 0.26
CALD1-212ENST00000454108 OTUB2Q96DC9 234 aa16.66■□□□□ 0.26
CALD1-212ENST00000454108 ZFRQ96KR1 1074 aaKnown RBP16.66■□□□□ 0.26
CALD1-212ENST00000454108 SH3BP1Q9Y3L3 701 aa16.66■□□□□ 0.26
CALD1-212ENST00000454108 LRRIQ3A6PVS8 624 aaPredicted RBP16.65■□□□□ 0.26
CALD1-212ENST00000454108 TNFRSF4P43489 277 aa16.65■□□□□ 0.26
CALD1-212ENST00000454108 KIR2DL1P43626 348 aaPredicted RBP16.65■□□□□ 0.26
CALD1-212ENST00000454108 GAD2Q05329 585 aa16.65■□□□□ 0.26
CALD1-212ENST00000454108 SNX30Q5VWJ9 437 aa16.65■□□□□ 0.26
CALD1-212ENST00000454108 BTBD8Q5XKL5 378 aa16.65■□□□□ 0.26
CALD1-212ENST00000454108 CEP57L1Q8IYX8 460 aa16.65■□□□□ 0.26
CALD1-212ENST00000454108 OLIG1Q8TAK6 271 aa16.65■□□□□ 0.26
CALD1-212ENST00000454108 PLEKHO2Q8TD55 490 aa16.65■□□□□ 0.26
CALD1-212ENST00000454108 PARD3BQ8TEW8 1205 aa16.65■□□□□ 0.26
CALD1-212ENST00000454108 NACA2Q9H009 215 aa16.65■□□□□ 0.26
CALD1-212ENST00000454108 CCSER2Q9H7U1 834 aa16.65■□□□□ 0.26
CALD1-212ENST00000454108 TMEM9BQ9NQ34 198 aa16.65■□□□□ 0.26
CALD1-212ENST00000454108 GMIPQ9P107 970 aa16.65■□□□□ 0.26
CALD1-212ENST00000454108 CHORDC1Q9UHD1 332 aaPredicted RBP16.65■□□□□ 0.26
CALD1-212ENST00000454108 PI4KAP42356 2102 aa16.64■□□□□ 0.25
CALD1-212ENST00000454108 PATE3B3GLJ2 98 aa16.64■□□□□ 0.25
CALD1-212ENST00000454108 TNFRSF10BO14763 440 aa16.64■□□□□ 0.25
CALD1-212ENST00000454108 AP1G2O75843 785 aa16.64■□□□□ 0.25
CALD1-212ENST00000454108 IRF1P10914 325 aa16.64■□□□□ 0.25
CALD1-212ENST00000454108 CHRM1P11229 460 aaPredicted RBP16.64■□□□□ 0.25
CALD1-212ENST00000454108 P4HA1P13674 534 aa16.64■□□□□ 0.25
CALD1-212ENST00000454108 P2RY2P41231 377 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms