RNA–Protein interactions for RNA: ENST00000453933.5

HMG20B-206, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-206ENST00000453933 ITPR1Q14643 2758 aa23.22■■□□□ 1.31
HMG20B-206ENST00000453933 OAS1P00973 400 aaKnown RBP23.21■■□□□ 1.31
HMG20B-206ENST00000453933 IDEP14735 1019 aa23.21■■□□□ 1.31
HMG20B-206ENST00000453933 GABRG2P18507 467 aa23.21■■□□□ 1.31
HMG20B-206ENST00000453933 GARTP22102 1010 aa23.21■■□□□ 1.31
HMG20B-206ENST00000453933 PPP3CCP48454 512 aa23.21■■□□□ 1.31
HMG20B-206ENST00000453933 NOP14P78316 857 aaKnown RBP23.21■■□□□ 1.31
HMG20B-206ENST00000453933 ZNF33AQ06730 810 aa23.21■■□□□ 1.31
HMG20B-206ENST00000453933 TAF10Q12962 218 aa23.21■■□□□ 1.31
HMG20B-206ENST00000453933 ZNF423Q2M1K9 1284 aa23.21■■□□□ 1.31
HMG20B-206ENST00000453933 LY6G5CQ5SRR4 150 aa23.21■■□□□ 1.31
HMG20B-206ENST00000453933 NAT16Q8N8M0 369 aa23.21■■□□□ 1.31
HMG20B-206ENST00000453933 DNAJC19Q96DA6 116 aa23.21■■□□□ 1.31
HMG20B-206ENST00000453933 HPDLQ96IR7 371 aa23.21■■□□□ 1.31
HMG20B-206ENST00000453933 CAMK1GQ96NX5 476 aa23.21■■□□□ 1.31
HMG20B-206ENST00000453933 CBWD1Q9BRT8 395 aa23.21■■□□□ 1.31
HMG20B-206ENST00000453933 PCIF1Q9H4Z3 704 aa23.21■■□□□ 1.31
HMG20B-206ENST00000453933 EHD2Q9NZN4 543 aa23.21■■□□□ 1.31
HMG20B-206ENST00000453933 R3HCC1Q9Y3T6 440 aaKnown RBP23.21■■□□□ 1.31
HMG20B-206ENST00000453933 GPSM3Q9Y4H4 160 aa23.21■■□□□ 1.31
HMG20B-206ENST00000453933 FREM2Q5SZK8 3169 aa23.2■■□□□ 1.3
HMG20B-206ENST00000453933 TBC1D3BA6NDS4 549 aa23.2■■□□□ 1.3
HMG20B-206ENST00000453933 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.2■■□□□ 1.3
HMG20B-206ENST00000453933 F8VP50 259 aa23.2■■□□□ 1.3
HMG20B-206ENST00000453933 ARHGAP33O14559 1287 aa23.2■■□□□ 1.3
HMG20B-206ENST00000453933 TMEM191BP0C7N4 346 aa23.2■■□□□ 1.3
HMG20B-206ENST00000453933 SCAPQ12770 1279 aa23.2■■□□□ 1.3
HMG20B-206ENST00000453933 MYO1EQ12965 1108 aa23.2■■□□□ 1.3
HMG20B-206ENST00000453933 MAPRE1Q15691 268 aaKnown RBP23.2■■□□□ 1.3
HMG20B-206ENST00000453933 OR5B17Q8NGF7 314 aa23.2■■□□□ 1.3
HMG20B-206ENST00000453933 MYCBPAPQ8TBZ2 947 aa23.2■■□□□ 1.3
HMG20B-206ENST00000453933 OLFML3Q9NRN5 406 aa23.2■■□□□ 1.3
HMG20B-206ENST00000453933 FBXO2Q9UK22 296 aaPredicted RBP23.2■■□□□ 1.3
HMG20B-206ENST00000453933 HCN2Q9UL51 889 aa23.2■■□□□ 1.3
HMG20B-206ENST00000453933 SRPRBQ9Y5M8 271 aaKnown RBP23.2■■□□□ 1.3
HMG20B-206ENST00000453933 GON4LQ3T8J9 2241 aa23.19■■□□□ 1.3
HMG20B-206ENST00000453933 PTPRJQ12913 1337 aa23.19■■□□□ 1.3
HMG20B-206ENST00000453933 MBL2P11226 248 aaPredicted RBP23.19■■□□□ 1.3
HMG20B-206ENST00000453933 CASP5P51878 434 aa23.19■■□□□ 1.3
HMG20B-206ENST00000453933 SOWAHCQ53LP3 525 aaPredicted RBP23.19■■□□□ 1.3
HMG20B-206ENST00000453933 SLC36A4Q6YBV0 504 aa23.19■■□□□ 1.3
HMG20B-206ENST00000453933 ZNF513Q8N8E2 541 aaPredicted RBP23.19■■□□□ 1.3
HMG20B-206ENST00000453933 C8orf48Q96LL4 319 aa23.19■■□□□ 1.3
HMG20B-206ENST00000453933 CLIC6Q96NY7 704 aa23.19■■□□□ 1.3
HMG20B-206ENST00000453933 INTS13Q9NVM9 706 aa23.19■■□□□ 1.3
HMG20B-206ENST00000453933 DNAAF2Q9NVR5 837 aaKnown RBP23.19■■□□□ 1.3
HMG20B-206ENST00000453933 CALCOCO1Q9P1Z2 691 aa23.19■■□□□ 1.3
HMG20B-206ENST00000453933 TBC1D14Q9P2M4 693 aa23.19■■□□□ 1.3
HMG20B-206ENST00000453933 NME7Q9Y5B8 376 aa23.19■■□□□ 1.3
HMG20B-206ENST00000453933 TRIM66O15016 1216 aa23.18■■□□□ 1.3
HMG20B-206ENST00000453933 SH3BP5O60239 455 aa23.18■■□□□ 1.3
HMG20B-206ENST00000453933 WARSP23381 471 aaKnown RBP23.18■■□□□ 1.3
HMG20B-206ENST00000453933 WASP42768 502 aa23.18■■□□□ 1.3
HMG20B-206ENST00000453933 CACNA2D1P54289 1103 aa23.18■■□□□ 1.3
HMG20B-206ENST00000453933 GAD2Q05329 585 aa23.18■■□□□ 1.3
HMG20B-206ENST00000453933 ALCAMQ13740 583 aa23.18■■□□□ 1.3
HMG20B-206ENST00000453933 HNRNPDQ14103 355 aaKnown RBP23.18■■□□□ 1.3
HMG20B-206ENST00000453933 TRIP6Q15654 476 aaKnown RBP23.18■■□□□ 1.3
HMG20B-206ENST00000453933 MDH1BQ5I0G3 518 aa23.18■■□□□ 1.3
HMG20B-206ENST00000453933 TDRD10Q5VZ19 366 aaKnown RBP23.18■■□□□ 1.3
HMG20B-206ENST00000453933 SLC41A1Q8IVJ1 513 aa23.18■■□□□ 1.3
HMG20B-206ENST00000453933 ETFBKMTQ8IXQ9 262 aa23.18■■□□□ 1.3
HMG20B-206ENST00000453933 TMEM30AQ9NV96 361 aa23.18■■□□□ 1.3
HMG20B-206ENST00000453933 HELZP42694 1942 aaKnown RBP23.18■■□□□ 1.3
HMG20B-206ENST00000453933 IGHV1OR15-9A0A0B4J2B8 117 aa23.17■■□□□ 1.3
HMG20B-206ENST00000453933 E2F8A0AVK6 867 aa23.17■■□□□ 1.3
HMG20B-206ENST00000453933 TULP3O75386 442 aa23.17■■□□□ 1.3
HMG20B-206ENST00000453933 CEBPZQ03701 1054 aaKnown RBP23.17■■□□□ 1.3
HMG20B-206ENST00000453933 IFRD2Q12894 506 aaPredicted RBP23.17■■□□□ 1.3
HMG20B-206ENST00000453933 CCDC73Q6ZRK6 1079 aa23.17■■□□□ 1.3
HMG20B-206ENST00000453933 HS2ST1Q7LGA3 356 aa23.17■■□□□ 1.3
HMG20B-206ENST00000453933 RABEPKQ7Z6M1 372 aa23.17■■□□□ 1.3
HMG20B-206ENST00000453933 DDX42Q86XP3 938 aaKnown RBP eCLIP23.17■■□□□ 1.3
HMG20B-206ENST00000453933 MIB1Q86YT6 1006 aa23.17■■□□□ 1.3
HMG20B-206ENST00000453933 PNPLA1Q8N8W4 532 aa23.17■■□□□ 1.3
HMG20B-206ENST00000453933 KCNV2Q8TDN2 545 aa23.17■■□□□ 1.3
HMG20B-206ENST00000453933 ANKRD36BP1Q96IX9 119 aa23.17■■□□□ 1.3
HMG20B-206ENST00000453933 MMS19Q96T76 1030 aa23.17■■□□□ 1.3
HMG20B-206ENST00000453933 MRPL45Q9BRJ2 306 aaKnown RBP23.17■■□□□ 1.3
HMG20B-206ENST00000453933 FGFBP2Q9BYJ0 223 aa23.17■■□□□ 1.3
HMG20B-206ENST00000453933 PANK2Q9BZ23 570 aa23.17■■□□□ 1.3
HMG20B-206ENST00000453933 PANK4Q9NVE7 773 aa23.17■■□□□ 1.3
HMG20B-206ENST00000453933 DEC1Q9P2X7 70 aa23.17■■□□□ 1.3
HMG20B-206ENST00000453933 A0A1W2PQF6 199 aa23.16■■□□□ 1.3
HMG20B-206ENST00000453933 TRIM24O15164 1050 aa23.16■■□□□ 1.3
HMG20B-206ENST00000453933 PRPF6O94906 941 aaKnown RBP23.16■■□□□ 1.3
HMG20B-206ENST00000453933 SYPP08247 313 aa23.16■■□□□ 1.3
HMG20B-206ENST00000453933 HOXB2P14652 356 aa23.16■■□□□ 1.3
HMG20B-206ENST00000453933 TRMT11Q7Z4G4 463 aaKnown RBP23.16■■□□□ 1.3
HMG20B-206ENST00000453933 PDZD3Q86UT5 571 aa23.16■■□□□ 1.3
HMG20B-206ENST00000453933 GPD1LQ8N335 351 aa23.16■■□□□ 1.3
HMG20B-206ENST00000453933 TRIML1Q8N9V2 468 aa23.16■■□□□ 1.3
HMG20B-206ENST00000453933 ZFRQ96KR1 1074 aaKnown RBP23.16■■□□□ 1.3
HMG20B-206ENST00000453933 SLITRK1Q96PX8 696 aa23.16■■□□□ 1.3
HMG20B-206ENST00000453933 PCDH15Q96QU1 1955 aa23.15■■□□□ 1.3
HMG20B-206ENST00000453933 COCHO43405 550 aa23.15■■□□□ 1.3
HMG20B-206ENST00000453933 GJB3O75712 270 aa23.15■■□□□ 1.3
HMG20B-206ENST00000453933 PDCP20941 246 aa23.15■■□□□ 1.3
HMG20B-206ENST00000453933 GNL1P36915 607 aaPredicted RBP23.15■■□□□ 1.3
HMG20B-206ENST00000453933 STAT6P42226 847 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms