RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 USP3Q9Y6I4 520 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 PDE4DIPQ5VU43 2346 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 CHD5Q8TDI0 1954 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 UQCRHLA0A096LP55 91 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 CTAGE15A4D2H0 777 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 MTMR11A4FU01 709 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 YJEFN3A6XGL0 299 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 ZBBXA8MT70 800 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 EFCAB8A8MWE9 144 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 E7ENQ6 273 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 H7C4K7 107 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 PSTPIP1O43586 416 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 LILRB3O75022 631 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 DAB1O75553 588 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 ENDOD1O94919 500 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 FBXO21O94952 628 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 TRUB2O95900 331 aaKnown RBP6.29□□□□□ -1.4
SDC4P-201ENST00000453285 SOD2P04179 222 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 UQCRHP07919 91 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 GLI1P08151 1106 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 USP17L7P0C7H9 530 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 CTAGE8P0CG41 777 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 PDGFRAP16234 1089 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 TFE3P19532 575 aaPredicted RBP6.29□□□□□ -1.4
SDC4P-201ENST00000453285 IL1R2P27930 398 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 MIPP30301 263 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 PCK1P35558 622 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 PAFAH1B1P43034 410 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 MAGEA11P43364 429 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 PTPN9P43378 593 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 GPR15P49685 360 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 RWDD2BP57060 319 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 SLC8A3P57103 927 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 DSG1Q02413 1049 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 C2orf54Q08AI8 447 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 SIX1Q15475 284 aaPredicted RBP6.29□□□□□ -1.4
SDC4P-201ENST00000453285 NFE2Q16621 373 aaPredicted RBP6.29□□□□□ -1.4
SDC4P-201ENST00000453285 ERCC6LQ2NKX8 1250 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 C15orf59Q2T9L4 293 aaPredicted RBP6.29□□□□□ -1.4
SDC4P-201ENST00000453285 SPOUT1Q5T280 376 aaKnown RBP6.29□□□□□ -1.4
SDC4P-201ENST00000453285 OTUD1Q5VV17 481 aaPredicted RBP6.29□□□□□ -1.4
SDC4P-201ENST00000453285 SLC8B1Q6J4K2 584 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 PSRC1Q6PGN9 363 aaPredicted RBP6.29□□□□□ -1.4
SDC4P-201ENST00000453285 VSTM1Q6UX27 236 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 RNF19BQ6ZMZ0 732 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 HFE2Q6ZVN8 426 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 DDX53Q86TM3 631 aaKnown RBP6.29□□□□□ -1.4
SDC4P-201ENST00000453285 CTAGE6Q86UF2 777 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 HERC6Q8IVU3 1022 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 CTAGE4Q8IX94 777 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 KATNAL2Q8IYT4 538 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 DEFB106AQ8N104 65 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 MMGT1Q8N4V1 131 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 TTC9BQ8N6N2 239 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 UBL4BQ8N7F7 174 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 ATAD1Q8NBU5 361 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 NOA1Q8NC60 698 aaKnown RBP6.29□□□□□ -1.4
SDC4P-201ENST00000453285 MNS1Q8NEH6 495 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 FBXO22Q8NEZ5 403 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 PHOSPHO2Q8TCD6 241 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 RIN2Q8WYP3 895 aaPredicted RBP6.29□□□□□ -1.4
SDC4P-201ENST00000453285 CLP1Q92989 425 aaKnown RBP6.29□□□□□ -1.4
SDC4P-201ENST00000453285 NT5C3BQ969T7 300 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 RPGRIP1Q96KN7 1286 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 C8orf48Q96LL4 319 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 RNPC3Q96LT9 517 aaKnown RBP6.29□□□□□ -1.4
SDC4P-201ENST00000453285 CFAP57Q96MR6 1250 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 SLC2A13Q96QE2 648 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 PEBP4Q96S96 227 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 YME1L1Q96TA2 773 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 CLSTN3Q9BQT9 956 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 HERPUD2Q9BSE4 406 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 HTATIP2Q9BUP3 242 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 OXCT2Q9BYC2 517 aaPredicted RBP6.29□□□□□ -1.4
SDC4P-201ENST00000453285 DMAP1Q9NPF5 467 aaPredicted RBP6.29□□□□□ -1.4
SDC4P-201ENST00000453285 CNGB3Q9NQW8 809 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 SPG21Q9NZD8 308 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 IL37Q9NZH6 218 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 CALCOCO1Q9P1Z2 691 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.29□□□□□ -1.4
SDC4P-201ENST00000453285 ZMYND8Q9ULU4 1186 aaPredicted RBP6.29□□□□□ -1.4
SDC4P-201ENST00000453285 NR2E1Q9Y466 385 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 PCDHB5Q9Y5E4 795 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 V9GYY5 206 aaPredicted RBP6.29□□□□□ -1.4
SDC4P-201ENST00000453285 MYOFQ9NZM1 2061 aa6.29□□□□□ -1.4
SDC4P-201ENST00000453285 HELZP42694 1942 aaKnown RBP6.29□□□□□ -1.4
SDC4P-201ENST00000453285 TCRBV7S2A1N4TA0A589 114 aa6.28□□□□□ -1.4
SDC4P-201ENST00000453285 FAM92AA1XBS5 289 aa6.28□□□□□ -1.4
SDC4P-201ENST00000453285 WDR27A2RRH5 827 aa6.28□□□□□ -1.4
SDC4P-201ENST00000453285 LCHNA4D1U4 455 aa6.28□□□□□ -1.4
SDC4P-201ENST00000453285 CARNS1A5YM72 827 aa6.28□□□□□ -1.4
SDC4P-201ENST00000453285 C3orf70A6NLC5 250 aaPredicted RBP6.28□□□□□ -1.4
SDC4P-201ENST00000453285 PGRMC1O00264 195 aaKnown RBP6.28□□□□□ -1.4
SDC4P-201ENST00000453285 DLL1O00548 723 aa6.28□□□□□ -1.4
SDC4P-201ENST00000453285 FSCN2O14926 492 aa6.28□□□□□ -1.4
SDC4P-201ENST00000453285 HSF2BPO75031 334 aa6.28□□□□□ -1.4
SDC4P-201ENST00000453285 RNF8O76064 485 aa6.28□□□□□ -1.4
SDC4P-201ENST00000453285 ABLIM3O94929 683 aa6.28□□□□□ -1.4
SDC4P-201ENST00000453285 ZBED1O96006 694 aa6.28□□□□□ -1.4
SDC4P-201ENST00000453285 FGGP02679 453 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms