RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 LPAL2Q16609 132 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 ZCWPW2Q504Y3 356 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 HECTD3Q5T447 861 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 FMR1NBQ8N0W7 255 aaPredicted RBP13.66□□□□□ -0.22
CHD3-206ENST00000452447 KIAA1958Q8N8K9 716 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 C12orf29Q8N999 325 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 EEF2KMTQ96G04 330 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 GSDMAQ96QA5 445 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 NT5C1AQ9BXI3 368 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 NIF3L1Q9GZT8 377 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 NACA2Q9H009 215 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 CYP3A43Q9HB55 503 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 TMEM8AQ9HCN3 771 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 COMMD8Q9NX08 183 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 HMGXB4Q9UGU5 601 aa13.66□□□□□ -0.22
CHD3-206ENST00000452447 HOOK1Q9UJC3 728 aaKnown RBP13.66□□□□□ -0.22
CHD3-206ENST00000452447 TNFRSF10BO14763 440 aa13.65□□□□□ -0.22
CHD3-206ENST00000452447 HRO43593 1189 aa13.65□□□□□ -0.22
CHD3-206ENST00000452447 STX10O60499 249 aa13.65□□□□□ -0.22
CHD3-206ENST00000452447 FAM200BP0CF97 657 aa13.65□□□□□ -0.22
CHD3-206ENST00000452447 ADORA2BP29275 332 aa13.65□□□□□ -0.22
CHD3-206ENST00000452447 MAP3K7CLP57077 242 aa13.65□□□□□ -0.22
CHD3-206ENST00000452447 NAIF1Q69YI7 327 aaPredicted RBP13.65□□□□□ -0.22
CHD3-206ENST00000452447 KRT39Q6A163 491 aa13.65□□□□□ -0.22
CHD3-206ENST00000452447 LAIR1Q6GTX8 287 aa13.65□□□□□ -0.22
CHD3-206ENST00000452447 PKN3Q6P5Z2 889 aa13.65□□□□□ -0.22
CHD3-206ENST00000452447 CEP68Q76N32 757 aa13.65□□□□□ -0.22
CHD3-206ENST00000452447 FILIP1Q7Z7B0 1213 aa13.65□□□□□ -0.22
CHD3-206ENST00000452447 CCDC26Q8TAB7 109 aa13.65□□□□□ -0.22
CHD3-206ENST00000452447 TSG101Q99816 390 aa13.65□□□□□ -0.22
CHD3-206ENST00000452447 SMOQ99835 787 aa13.65□□□□□ -0.22
CHD3-206ENST00000452447 FBXO44Q9H4M3 255 aa13.65□□□□□ -0.22
CHD3-206ENST00000452447 IL37Q9NZH6 218 aa13.65□□□□□ -0.22
CHD3-206ENST00000452447 CFAP97Q9P2B7 532 aa13.65□□□□□ -0.22
CHD3-206ENST00000452447 CACNA1AO00555 2505 aa13.64□□□□□ -0.23
CHD3-206ENST00000452447 MYO16Q9Y6X6 1858 aa13.64□□□□□ -0.23
CHD3-206ENST00000452447 COCHO43405 550 aa13.64□□□□□ -0.23
CHD3-206ENST00000452447 BEST1O76090 585 aa13.64□□□□□ -0.23
CHD3-206ENST00000452447 CD58P19256 250 aa13.64□□□□□ -0.23
CHD3-206ENST00000452447 PRCPP42785 496 aa13.64□□□□□ -0.23
CHD3-206ENST00000452447 FOXK2Q01167 660 aa13.64□□□□□ -0.23
CHD3-206ENST00000452447 INCA1Q0VD86 236 aa13.64□□□□□ -0.23
CHD3-206ENST00000452447 ZNF658Q5TYW1 1059 aaPredicted RBP13.64□□□□□ -0.23
CHD3-206ENST00000452447 ADGRG2Q8IZP9 1017 aa13.64□□□□□ -0.23
CHD3-206ENST00000452447 RPLP0P6Q8NHW5 317 aa13.64□□□□□ -0.23
CHD3-206ENST00000452447 SMARCE1Q969G3 411 aa13.64□□□□□ -0.23
CHD3-206ENST00000452447 RMDN1Q96DB5 314 aa13.64□□□□□ -0.23
CHD3-206ENST00000452447 CSNK1G1Q9HCP0 422 aa13.64□□□□□ -0.23
CHD3-206ENST00000452447 GMIPQ9P107 970 aa13.64□□□□□ -0.23
CHD3-206ENST00000452447 TBC1D14Q9P2M4 693 aa13.64□□□□□ -0.23
CHD3-206ENST00000452447 USP18Q9UMW8 372 aa13.64□□□□□ -0.23
CHD3-206ENST00000452447 SH3BP1Q9Y3L3 701 aa13.64□□□□□ -0.23
CHD3-206ENST00000452447 CCDC163A0A0D9SF12 145 aa13.63□□□□□ -0.23
CHD3-206ENST00000452447 FAM92AA1XBS5 289 aa13.63□□□□□ -0.23
CHD3-206ENST00000452447 SCAMP3O14828 347 aaKnown RBP13.63□□□□□ -0.23
CHD3-206ENST00000452447 PXNP49023 591 aaPredicted RBP13.63□□□□□ -0.23
CHD3-206ENST00000452447 MXI1P50539 228 aa13.63□□□□□ -0.23
CHD3-206ENST00000452447 TUBP50607 506 aa13.63□□□□□ -0.23
CHD3-206ENST00000452447 SRSF5Q13243 272 aaKnown RBP13.63□□□□□ -0.23
CHD3-206ENST00000452447 TCERG1LQ5VWI1 586 aa13.63□□□□□ -0.23
CHD3-206ENST00000452447 SNX30Q5VWJ9 437 aa13.63□□□□□ -0.23
CHD3-206ENST00000452447 ERMP1Q7Z2K6 904 aa13.63□□□□□ -0.23
CHD3-206ENST00000452447 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.63□□□□□ -0.23
CHD3-206ENST00000452447 WDR5BQ86VZ2 330 aa13.63□□□□□ -0.23
CHD3-206ENST00000452447 CAMKK1Q8N5S9 505 aa13.63□□□□□ -0.23
CHD3-206ENST00000452447 FBXL13Q8NEE6 735 aa13.63□□□□□ -0.23
CHD3-206ENST00000452447 ZMIZ2Q8NF64 920 aa13.63□□□□□ -0.23
CHD3-206ENST00000452447 JAKMIP2Q96AA8 810 aa13.63□□□□□ -0.23
CHD3-206ENST00000452447 ACDQ96AP0 544 aa13.63□□□□□ -0.23
CHD3-206ENST00000452447 CYFIP2Q96F07 1278 aa13.63□□□□□ -0.23
CHD3-206ENST00000452447 TWNKQ96RR1 684 aa13.63□□□□□ -0.23
CHD3-206ENST00000452447 HNRNPABQ99729 332 aaKnown RBP13.63□□□□□ -0.23
CHD3-206ENST00000452447 GTPBP4Q9BZE4 634 aaKnown RBP13.63□□□□□ -0.23
CHD3-206ENST00000452447 CCSER2Q9H7U1 834 aa13.63□□□□□ -0.23
CHD3-206ENST00000452447 APOBEC3GQ9HC16 384 aaKnown RBP13.63□□□□□ -0.23
CHD3-206ENST00000452447 TLR8Q9NR97 1041 aaKnown RBP13.63□□□□□ -0.23
CHD3-206ENST00000452447 E2F8A0AVK6 867 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 CILPO75339 1184 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 ADH1CP00326 375 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 CYP17A1P05093 508 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 RETP07949 1114 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 FKBP3Q00688 224 aaKnown RBP13.62□□□□□ -0.23
CHD3-206ENST00000452447 DHCR24Q15392 516 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 DCAF17Q5H9S7 520 aaPredicted RBP13.62□□□□□ -0.23
CHD3-206ENST00000452447 CLEC20AQ6ZU45 233 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 SYT13Q7L8C5 426 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 TTC39CQ8N584 583 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 ENGASEQ8NFI3 743 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 TIGD1Q96MW7 591 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 PCDHA5Q9Y5H7 936 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 TLR5O60602 858 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 RPP40O75818 363 aaKnown RBP13.62□□□□□ -0.23
CHD3-206ENST00000452447 ZDHHC11BP0C7U3 371 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 CCDC192P0DO97 292 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 ACO1P21399 889 aaKnown RBP13.62□□□□□ -0.23
CHD3-206ENST00000452447 SDHBP21912 280 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 HOXC13P31276 330 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 OPRD1P41143 372 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 MCCD1P59942 119 aaPredicted RBP13.62□□□□□ -0.23
CHD3-206ENST00000452447 LMNB2Q03252 620 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms