RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 ZNF840PA6NDX5 716 aa22.93■■□□□ 1.26
C9orf3-208ENST00000451893 LEFTY2O00292 366 aa22.93■■□□□ 1.26
C9orf3-208ENST00000451893 SLC9A3R1O14745 358 aaPredicted RBP22.93■■□□□ 1.26
C9orf3-208ENST00000451893 RNF40O75150 1001 aa22.93■■□□□ 1.26
C9orf3-208ENST00000451893 AP1G2O75843 785 aa22.93■■□□□ 1.26
C9orf3-208ENST00000451893 VNN1O95497 513 aa22.93■■□□□ 1.26
C9orf3-208ENST00000451893 EGFP01133 1207 aa22.93■■□□□ 1.26
C9orf3-208ENST00000451893 PSMC2P35998 433 aaKnown RBP22.93■■□□□ 1.26
C9orf3-208ENST00000451893 GALK1P51570 392 aa22.93■■□□□ 1.26
C9orf3-208ENST00000451893 ADAM9Q13443 819 aa22.93■■□□□ 1.26
C9orf3-208ENST00000451893 STIM1Q13586 685 aa22.93■■□□□ 1.26
C9orf3-208ENST00000451893 FBXO43Q4G163 708 aa22.93■■□□□ 1.26
C9orf3-208ENST00000451893 COBLL1Q53SF7 1204 aa22.93■■□□□ 1.26
C9orf3-208ENST00000451893 ISM2Q6H9L7 571 aa22.93■■□□□ 1.26
C9orf3-208ENST00000451893 FSTL4Q6MZW2 842 aa22.93■■□□□ 1.26
C9orf3-208ENST00000451893 LUZP1Q86V48 1076 aa22.93■■□□□ 1.26
C9orf3-208ENST00000451893 CCDC26Q8TAB7 109 aa22.93■■□□□ 1.26
C9orf3-208ENST00000451893 OTOL1A6NHN0 477 aaPredicted RBP22.92■■□□□ 1.26
C9orf3-208ENST00000451893 MAPK13O15264 365 aa22.92■■□□□ 1.26
C9orf3-208ENST00000451893 PAPSS2O95340 614 aaPredicted RBP22.92■■□□□ 1.26
C9orf3-208ENST00000451893 HLA-DRAP01903 254 aa22.92■■□□□ 1.26
C9orf3-208ENST00000451893 TDGF1P13385 188 aa22.92■■□□□ 1.26
C9orf3-208ENST00000451893 NDST1P52848 882 aa22.92■■□□□ 1.26
C9orf3-208ENST00000451893 CACNA2D1P54289 1103 aa22.92■■□□□ 1.26
C9orf3-208ENST00000451893 FOXK2Q01167 660 aa22.92■■□□□ 1.26
C9orf3-208ENST00000451893 MYL5Q02045 173 aa22.92■■□□□ 1.26
C9orf3-208ENST00000451893 ORC1Q13415 861 aa22.92■■□□□ 1.26
C9orf3-208ENST00000451893 EML3Q32P44 896 aa22.92■■□□□ 1.26
C9orf3-208ENST00000451893 LAIR1Q6GTX8 287 aa22.92■■□□□ 1.26
C9orf3-208ENST00000451893 DHX40Q8IX18 779 aaKnown RBP22.92■■□□□ 1.26
C9orf3-208ENST00000451893 GUF1Q8N442 669 aaKnown RBP22.92■■□□□ 1.26
C9orf3-208ENST00000451893 ENOX1Q8TC92 643 aaKnown RBP22.92■■□□□ 1.26
C9orf3-208ENST00000451893 TMEM174Q8WUU8 243 aa22.92■■□□□ 1.26
C9orf3-208ENST00000451893 CHFRQ96EP1 664 aa22.92■■□□□ 1.26
C9orf3-208ENST00000451893 GVINP1Q7Z2Y8 2422 aa22.92■■□□□ 1.26
C9orf3-208ENST00000451893 TRIM49P0CI25 452 aa22.91■■□□□ 1.26
C9orf3-208ENST00000451893 TRIM49CP0CI26 452 aa22.91■■□□□ 1.26
C9orf3-208ENST00000451893 TCF3P15923 654 aa22.91■■□□□ 1.26
C9orf3-208ENST00000451893 GCLMP48507 274 aa22.91■■□□□ 1.26
C9orf3-208ENST00000451893 SLC5A3P53794 718 aa22.91■■□□□ 1.26
C9orf3-208ENST00000451893 DMWDQ09019 674 aa22.91■■□□□ 1.26
C9orf3-208ENST00000451893 WDR44Q5JSH3 913 aa22.91■■□□□ 1.26
C9orf3-208ENST00000451893 SPOPLQ6IQ16 392 aa22.91■■□□□ 1.26
C9orf3-208ENST00000451893 UNC93AQ86WB7 457 aa22.91■■□□□ 1.26
C9orf3-208ENST00000451893 OVCA2Q8WZ82 227 aa22.91■■□□□ 1.26
C9orf3-208ENST00000451893 ACDQ96AP0 544 aa22.91■■□□□ 1.26
C9orf3-208ENST00000451893 KCNK16Q96T55 309 aa22.91■■□□□ 1.26
C9orf3-208ENST00000451893 TSG101Q99816 390 aa22.91■■□□□ 1.26
C9orf3-208ENST00000451893 FAM49BQ9NUQ9 324 aa22.91■■□□□ 1.26
C9orf3-208ENST00000451893 SH3BP1Q9Y3L3 701 aa22.91■■□□□ 1.26
C9orf3-208ENST00000451893 RALGAPA1Q6GYQ0 2036 aa22.91■■□□□ 1.26
C9orf3-208ENST00000451893 MYO16Q9Y6X6 1858 aa22.9■■□□□ 1.26
C9orf3-208ENST00000451893 K7ESF4 209 aa22.9■■□□□ 1.26
C9orf3-208ENST00000451893 AKAP3O75969 853 aa22.9■■□□□ 1.26
C9orf3-208ENST00000451893 EPB41P11171 864 aaKnown RBP22.9■■□□□ 1.26
C9orf3-208ENST00000451893 CCDC130P13994 396 aa22.9■■□□□ 1.26
C9orf3-208ENST00000451893 ADORA2BP29275 332 aa22.9■■□□□ 1.26
C9orf3-208ENST00000451893 SLC7A9P82251 487 aa22.9■■□□□ 1.26
C9orf3-208ENST00000451893 CCDC173Q0VFZ6 552 aa22.9■■□□□ 1.26
C9orf3-208ENST00000451893 ERMP1Q7Z2K6 904 aa22.9■■□□□ 1.26
C9orf3-208ENST00000451893 FILIP1Q7Z7B0 1213 aa22.9■■□□□ 1.26
C9orf3-208ENST00000451893 AOPEPQ8N6M6 819 aa22.9■■□□□ 1.26
C9orf3-208ENST00000451893 RPLP0P6Q8NHW5 317 aa22.9■■□□□ 1.26
C9orf3-208ENST00000451893 SLC2A14Q8TDB8 520 aa22.9■■□□□ 1.26
C9orf3-208ENST00000451893 SDCBP2Q9H190 292 aa22.9■■□□□ 1.26
C9orf3-208ENST00000451893 CFAP97Q9P2B7 532 aa22.9■■□□□ 1.26
C9orf3-208ENST00000451893 OTOGLQ3ZCN5 2332 aa22.9■■□□□ 1.26
C9orf3-208ENST00000451893 PPP1R3GB7ZBB8 358 aa22.89■■□□□ 1.25
C9orf3-208ENST00000451893 STX10O60499 249 aa22.89■■□□□ 1.25
C9orf3-208ENST00000451893 ASS1P00966 412 aaKnown RBP22.89■■□□□ 1.25
C9orf3-208ENST00000451893 FAM200BP0CF97 657 aa22.89■■□□□ 1.25
C9orf3-208ENST00000451893 CD58P19256 250 aa22.89■■□□□ 1.25
C9orf3-208ENST00000451893 SDHBP21912 280 aa22.89■■□□□ 1.25
C9orf3-208ENST00000451893 LMNB2Q03252 620 aa22.89■■□□□ 1.25
C9orf3-208ENST00000451893 SRSF5Q13243 272 aaKnown RBP22.89■■□□□ 1.25
C9orf3-208ENST00000451893 NFIL3Q16649 462 aa22.89■■□□□ 1.25
C9orf3-208ENST00000451893 HECTD3Q5T447 861 aa22.89■■□□□ 1.25
C9orf3-208ENST00000451893 DGLUCYQ7Z3D6 616 aa22.89■■□□□ 1.25
C9orf3-208ENST00000451893 WDR5BQ86VZ2 330 aa22.89■■□□□ 1.25
C9orf3-208ENST00000451893 JAKMIP2Q96AA8 810 aa22.89■■□□□ 1.25
C9orf3-208ENST00000451893 RNF38Q9H0F5 515 aa22.89■■□□□ 1.25
C9orf3-208ENST00000451893 LINC00597Q9H2U6 94 aa22.89■■□□□ 1.25
C9orf3-208ENST00000451893 FBXO44Q9H4M3 255 aa22.89■■□□□ 1.25
C9orf3-208ENST00000451893 CHORDC1Q9UHD1 332 aaPredicted RBP22.89■■□□□ 1.25
C9orf3-208ENST00000451893 SCAMP3O14828 347 aaKnown RBP22.88■■□□□ 1.25
C9orf3-208ENST00000451893 CETN3O15182 167 aa22.88■■□□□ 1.25
C9orf3-208ENST00000451893 OAS1P00973 400 aaKnown RBP22.88■■□□□ 1.25
C9orf3-208ENST00000451893 PXNP49023 591 aaPredicted RBP22.88■■□□□ 1.25
C9orf3-208ENST00000451893 MAP3K7CLP57077 242 aa22.88■■□□□ 1.25
C9orf3-208ENST00000451893 SPEM2Q0P670 501 aa22.88■■□□□ 1.25
C9orf3-208ENST00000451893 PUM1Q14671 1186 aaKnown RBP eCLIP22.88■■□□□ 1.25
C9orf3-208ENST00000451893 SARM1Q6SZW1 724 aa22.88■■□□□ 1.25
C9orf3-208ENST00000451893 SCAMP5Q8TAC9 235 aa22.88■■□□□ 1.25
C9orf3-208ENST00000451893 RMDN1Q96DB5 314 aa22.88■■□□□ 1.25
C9orf3-208ENST00000451893 DHTKD1Q96HY7 919 aaPredicted RBP22.88■■□□□ 1.25
C9orf3-208ENST00000451893 NT5C1AQ9BXI3 368 aa22.88■■□□□ 1.25
C9orf3-208ENST00000451893 TMEM30AQ9NV96 361 aa22.88■■□□□ 1.25
C9orf3-208ENST00000451893 COMMD8Q9NX08 183 aa22.88■■□□□ 1.25
C9orf3-208ENST00000451893 TBC1D14Q9P2M4 693 aa22.88■■□□□ 1.25
C9orf3-208ENST00000451893 CDV3Q9UKY7 258 aaKnown RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms