RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 PTPN7P35236 360 aa11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 EPHB4P54760 987 aa11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 HTRA4P83105 476 aaPredicted RBP11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 GPR17Q13304 367 aa11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 HADHQ16836 314 aaKnown RBP11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 C15orf59Q2T9L4 293 aaPredicted RBP11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 USP41Q3LFD5 358 aa11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 TMEM240Q5SV17 173 aa11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 SPOUT1Q5T280 376 aaKnown RBP11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 TXNRD3NBQ6F5E7 133 aa11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 PM20D1Q6GTS8 502 aa11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 VSTM1Q6UX27 236 aa11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 RSPO2Q6UXX9 243 aaPredicted RBP11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 BHLHA9Q7RTU4 235 aa11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 SLC13A5Q86YT5 568 aaPredicted RBP11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 RCOR2Q8IZ40 523 aa11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 COLGALT1Q8NBJ5 622 aa11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 PIK3R5Q8WYR1 880 aa11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 IRGQQ8WZA9 623 aa11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 NDRG1Q92597 394 aaKnown RBP11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 CENPIQ92674 756 aaPredicted RBP11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 RBM41Q96IZ5 413 aaKnown RBP11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 C8orf48Q96LL4 319 aa11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 CFAP57Q96MR6 1250 aa11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 SLC2A13Q96QE2 648 aa11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 HERC2P3Q9BVR0 1158 aa11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 ANKZF1Q9H8Y5 726 aa11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 ABI2Q9NYB9 513 aaPredicted RBP11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 MTRRQ9UBK8 725 aa11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 PCDHB5Q9Y5E4 795 aa11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 BACE2Q9Y5Z0 518 aa11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 USP3Q9Y6I4 520 aa11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 VWA8A3KMH1 1905 aa11.77□□□□□ -0.53
NDUFA3-209ENST00000451517 COL4A4P53420 1690 aaPredicted RBP11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 ZBBXA8MT70 800 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 TNFRSF10BO14763 440 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 FSCN2O14926 492 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 GJB5O95377 273 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 ZBED1O96006 694 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 SOD2P04179 222 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 KRT1P04264 644 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 DESP17661 470 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 NOS2P35228 1153 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 GJC1P36383 396 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 MATKP42679 507 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 COPS2P61201 443 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 YWHAZP63104 245 aaKnown RBP11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 SMARCB1Q12824 385 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 SIX1Q15475 284 aaPredicted RBP11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 ATP13A4Q4VNC1 1196 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 SH3PXD2AQ5TCZ1 1133 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 PRSS55Q6UWB4 352 aaPredicted RBP11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 CYP4V2Q6ZWL3 525 aaPredicted RBP11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 DEFB106AQ8N104 65 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 SPPL2BQ8TCT7 592 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 C2orf15Q8WU43 125 aaKnown RBP11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 FAM172AQ8WUF8 416 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 HERVK_113Q902F9 699 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 ANKRD7Q92527 254 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 NT5C3BQ969T7 300 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 SLITRK1Q96PX8 696 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 YME1L1Q96TA2 773 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 AP1M1Q9BXS5 423 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 EPC1Q9H2F5 836 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 POPDC2Q9HBU9 364 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 SPG21Q9NZD8 308 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 USP18Q9UMW8 372 aa11.76□□□□□ -0.53
NDUFA3-209ENST00000451517 PATJQ8NI35 1801 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 TCRBV7S2A1N4TA0A589 114 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 TARSL2A2RTX5 802 aaKnown RBP11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 MTMR11A4FU01 709 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 YJEFN3A6XGL0 299 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 E7ENQ6 273 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 TRIM66O15016 1216 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 ENDOD1O94919 500 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 VNN2O95498 520 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 FYNP06241 537 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 USP17L7P0C7H9 530 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 RHOXF2BP0C7M4 288 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 CPB1P15086 417 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 GRIK1P39086 918 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 CETN2P41208 172 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 HDAC4P56524 1084 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 ATP11AP98196 1134 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 DSG1Q02413 1049 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 PSMD5Q16401 504 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 PPP2R5EQ16537 467 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 TAZQ16635 292 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 CYP1B1Q16678 543 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 CDO1Q16878 200 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 SLC25A52Q3SY17 297 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 GLE1Q53GS7 698 aaKnown RBP11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 RAB6CQ53S08 254 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 OTUD1Q5VV17 481 aaPredicted RBP11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 SLC8B1Q6J4K2 584 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 MFSD7Q6UXD7 560 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 SPOCD1Q6ZMY3 1216 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 HFE2Q6ZVN8 426 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 BEND5Q7L4P6 421 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms