RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 A0A1W2PRU2 124 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 FAM92AA1XBS5 289 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 IPO7O95373 1038 aaKnown RBP13.72□□□□□ -0.21
VPS33A-202ENST00000451053 CYP1A1P04798 512 aaPredicted RBP13.72□□□□□ -0.21
VPS33A-202ENST00000451053 PLEKP08567 350 aaPredicted RBP13.72□□□□□ -0.21
VPS33A-202ENST00000451053 LCP1P13796 627 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 IL9P15248 144 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 CEBPBP17676 345 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 CDH5P33151 784 aaPredicted RBP13.72□□□□□ -0.21
VPS33A-202ENST00000451053 CYLC1P35663 651 aaPredicted RBP13.72□□□□□ -0.21
VPS33A-202ENST00000451053 RPL34P49207 117 aaKnown RBP13.72□□□□□ -0.21
VPS33A-202ENST00000451053 PGFP49763 221 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 NOMO3P69849 1222 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 CYP4F8P98187 520 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 TEAD2Q15562 447 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 SMAD2Q15796 467 aaKnown RBP13.72□□□□□ -0.21
VPS33A-202ENST00000451053 TDRD12Q587J7 1177 aaKnown RBP13.72□□□□□ -0.21
VPS33A-202ENST00000451053 NAA35Q5VZE5 725 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 POTEHQ6S545 545 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 GET4Q7L5D6 327 aaPredicted RBP13.72□□□□□ -0.21
VPS33A-202ENST00000451053 CCDC170Q8IYT3 715 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 LEMD2Q8NC56 503 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 TMEM35BQ8NCS4 154 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 STK32AQ8WU08 396 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 NDRG1Q92597 394 aaKnown RBP13.72□□□□□ -0.21
VPS33A-202ENST00000451053 CCDC42Q96M95 316 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 CPXM1Q96SM3 734 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 SLC4A5Q9BY07 1137 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 ULBP1Q9BZM6 244 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 ATXN3LQ9H3M9 355 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 DEF6Q9H4E7 631 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 LRRC4Q9HBW1 653 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 ST7Q9NRC1 585 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 SEPT11Q9NVA2 429 aaKnown RBP13.72□□□□□ -0.21
VPS33A-202ENST00000451053 COMMD8Q9NX08 183 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 GMIPQ9P107 970 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 UXTQ9UBK9 157 aaPredicted RBP13.72□□□□□ -0.21
VPS33A-202ENST00000451053 TJP2Q9UDY2 1190 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 MRPS23Q9Y3D9 190 aaKnown RBP13.72□□□□□ -0.21
VPS33A-202ENST00000451053 CEP83Q9Y592 693 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 USP3Q9Y6I4 520 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.72□□□□□ -0.21
VPS33A-202ENST00000451053 MYO16Q9Y6X6 1858 aa13.72□□□□□ -0.21
VPS33A-202ENST00000451053 ZNF638Q14966 1978 aaKnown RBP13.71□□□□□ -0.21
VPS33A-202ENST00000451053 E5RJQ4 531 aa13.71□□□□□ -0.21
VPS33A-202ENST00000451053 ZNF197O14709 1029 aa13.71□□□□□ -0.21
VPS33A-202ENST00000451053 FGF19O95750 216 aa13.71□□□□□ -0.21
VPS33A-202ENST00000451053 LSM8O95777 96 aaKnown RBP13.71□□□□□ -0.21
VPS33A-202ENST00000451053 USP17L7P0C7H9 530 aa13.71□□□□□ -0.21
VPS33A-202ENST00000451053 SP100P23497 879 aaPredicted RBP13.71□□□□□ -0.21
VPS33A-202ENST00000451053 CDC25CP30307 473 aa13.71□□□□□ -0.21
VPS33A-202ENST00000451053 AAK1Q2M2I8 961 aa13.71□□□□□ -0.21
VPS33A-202ENST00000451053 PUS10Q3MIT2 529 aaKnown RBP13.71□□□□□ -0.21
VPS33A-202ENST00000451053 PTPN20Q4JDL3 420 aa13.71□□□□□ -0.21
VPS33A-202ENST00000451053 STXBP5Q5T5C0 1151 aa13.71□□□□□ -0.21
VPS33A-202ENST00000451053 WDR59Q6PJI9 974 aa13.71□□□□□ -0.21
VPS33A-202ENST00000451053 TMEM139Q8IV31 216 aa13.71□□□□□ -0.21
VPS33A-202ENST00000451053 SIX6OS1Q8N1H7 587 aa13.71□□□□□ -0.21
VPS33A-202ENST00000451053 CLEC4CQ8WTT0 213 aa13.71□□□□□ -0.21
VPS33A-202ENST00000451053 CPA5Q8WXQ8 436 aa13.71□□□□□ -0.21
VPS33A-202ENST00000451053 PPP1R13BQ96KQ4 1090 aa13.71□□□□□ -0.21
VPS33A-202ENST00000451053 HSFY1Q96LI6 401 aa13.71□□□□□ -0.21
VPS33A-202ENST00000451053 MYADMQ96S97 322 aa13.71□□□□□ -0.21
VPS33A-202ENST00000451053 KCNF1Q9H3M0 494 aa13.71□□□□□ -0.21
VPS33A-202ENST00000451053 FBXO44Q9H4M3 255 aa13.71□□□□□ -0.21
VPS33A-202ENST00000451053 EHD2Q9NZN4 543 aa13.71□□□□□ -0.21
VPS33A-202ENST00000451053 CHORDC1Q9UHD1 332 aaPredicted RBP13.71□□□□□ -0.21
VPS33A-202ENST00000451053 SCML2Q9UQR0 700 aa13.71□□□□□ -0.21
VPS33A-202ENST00000451053 OBSL1O75147 1896 aa13.71□□□□□ -0.21
VPS33A-202ENST00000451053 ZBED1O96006 694 aa13.7□□□□□ -0.22
VPS33A-202ENST00000451053 ERBB2P04626 1255 aa13.7□□□□□ -0.22
VPS33A-202ENST00000451053 TNFAIP3P21580 790 aa13.7□□□□□ -0.22
VPS33A-202ENST00000451053 ACADSBP45954 432 aa13.7□□□□□ -0.22
VPS33A-202ENST00000451053 MRPS5P82675 430 aaKnown RBP13.7□□□□□ -0.22
VPS33A-202ENST00000451053 MAPK8IP2Q13387 824 aaPredicted RBP13.7□□□□□ -0.22
VPS33A-202ENST00000451053 CLEC16AQ2KHT3 1053 aa13.7□□□□□ -0.22
VPS33A-202ENST00000451053 PM20D1Q6GTS8 502 aa13.7□□□□□ -0.22
VPS33A-202ENST00000451053 TRIM72Q6ZMU5 477 aa13.7□□□□□ -0.22
VPS33A-202ENST00000451053 BHLHA9Q7RTU4 235 aa13.7□□□□□ -0.22
VPS33A-202ENST00000451053 SCD5Q86SK9 330 aa13.7□□□□□ -0.22
VPS33A-202ENST00000451053 TMEM110Q86TL2 294 aa13.7□□□□□ -0.22
VPS33A-202ENST00000451053 NPAS3Q8IXF0 933 aa13.7□□□□□ -0.22
VPS33A-202ENST00000451053 SLC30A5Q8TAD4 765 aa13.7□□□□□ -0.22
VPS33A-202ENST00000451053 ATXN2LQ8WWM7 1075 aaKnown RBP13.7□□□□□ -0.22
VPS33A-202ENST00000451053 FGF13Q92913 245 aa13.7□□□□□ -0.22
VPS33A-202ENST00000451053 ZNF830Q96NB3 372 aaPredicted RBP13.7□□□□□ -0.22
VPS33A-202ENST00000451053 NOX5Q96PH1 765 aa13.7□□□□□ -0.22
VPS33A-202ENST00000451053 SLITRK1Q96PX8 696 aa13.7□□□□□ -0.22
VPS33A-202ENST00000451053 GCNAQ96QF7 691 aa13.7□□□□□ -0.22
VPS33A-202ENST00000451053 PHF7Q9BWX1 381 aaPredicted RBP13.7□□□□□ -0.22
VPS33A-202ENST00000451053 MIS12Q9H081 205 aa13.7□□□□□ -0.22
VPS33A-202ENST00000451053 NHEJ1Q9H9Q4 299 aaPredicted RBP13.7□□□□□ -0.22
VPS33A-202ENST00000451053 NMUR1Q9HB89 426 aa13.7□□□□□ -0.22
VPS33A-202ENST00000451053 CYLDQ9NQC7 956 aa13.7□□□□□ -0.22
VPS33A-202ENST00000451053 TRPM5Q9NZQ8 1165 aa13.7□□□□□ -0.22
VPS33A-202ENST00000451053 ARHGAP20Q9P2F6 1191 aa13.7□□□□□ -0.22
VPS33A-202ENST00000451053 ZKSCAN5Q9Y2L8 839 aa13.7□□□□□ -0.22
VPS33A-202ENST00000451053 NCANO14594 1321 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 A0A1W2PQH9 124 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 C2orf78A6NCI8 922 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms