RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 TRPV5Q9NQA5 729 aa15.15■□□□□ 0.02
COL3A1-203ENST00000450867 RTN4Q9NQC3 1192 aaKnown RBP15.15■□□□□ 0.02
COL3A1-203ENST00000450867 TDP1Q9NUW8 608 aa15.15■□□□□ 0.02
COL3A1-203ENST00000450867 KMT2EQ8IZD2 1858 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 TRAV19A0A0A6YYK7 116 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 A0A1B0GTH6 734 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 C2orf78A6NCI8 922 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 HEPACAM2A8MVW5 462 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 FOXN3O00409 490 aaPredicted RBP15.14■□□□□ 0.01
COL3A1-203ENST00000450867 GPR37L1O60883 481 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 USP17L7P0C7H9 530 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 GNA15P30679 374 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 CLCN1P35523 988 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 AVPR1AP37288 418 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 PSEN1P49768 467 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 JAM2P57087 298 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 SLC7A9P82251 487 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 USP4Q13107 963 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 DRAP1Q14919 205 aaPredicted RBP15.14■□□□□ 0.01
COL3A1-203ENST00000450867 SYCP1Q15431 976 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 PM20D1Q6GTS8 502 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 LRSAM1Q6UWE0 723 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 BMP8AQ7Z5Y6 402 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 LUZP1Q86V48 1076 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 ZNF606Q8WXB4 792 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 DNASE1L2Q92874 299 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 USP13Q92995 863 aaPredicted RBP15.14■□□□□ 0.01
COL3A1-203ENST00000450867 LRRC3BQ96PB8 259 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 SLC22A12Q96S37 553 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 C1QTNF1Q9BXJ1 281 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 GMIPQ9P107 970 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 WNT16Q9UBV4 365 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 PCDHGC3Q9UN70 934 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 ARHGAP26Q9UNA1 814 aa15.14■□□□□ 0.01
COL3A1-203ENST00000450867 MIA3Q5JRA6 1907 aa15.13■□□□□ 0.01
COL3A1-203ENST00000450867 COL4A3Q01955 1670 aa15.13■□□□□ 0.01
COL3A1-203ENST00000450867 F8VZ95 297 aa15.13■□□□□ 0.01
COL3A1-203ENST00000450867 TULP2O00295 520 aa15.13■□□□□ 0.01
COL3A1-203ENST00000450867 ARNTLO00327 626 aa15.13■□□□□ 0.01
COL3A1-203ENST00000450867 MED7O43513 233 aa15.13■□□□□ 0.01
COL3A1-203ENST00000450867 CALCAP01258 141 aa15.13■□□□□ 0.01
COL3A1-203ENST00000450867 GPD2P43304 727 aa15.13■□□□□ 0.01
COL3A1-203ENST00000450867 KLK7P49862 253 aa15.13■□□□□ 0.01
COL3A1-203ENST00000450867 UBXN1Q04323 297 aa15.13■□□□□ 0.01
COL3A1-203ENST00000450867 STK32AQ8WU08 396 aa15.13■□□□□ 0.01
COL3A1-203ENST00000450867 HSFY1Q96LI6 401 aa15.13■□□□□ 0.01
COL3A1-203ENST00000450867 TRMT61BQ9BVS5 477 aaKnown RBP15.13■□□□□ 0.01
COL3A1-203ENST00000450867 CYLDQ9NQC7 956 aa15.13■□□□□ 0.01
COL3A1-203ENST00000450867 TLR8Q9NR97 1041 aaKnown RBP15.13■□□□□ 0.01
COL3A1-203ENST00000450867 CLIC5Q9NZA1 410 aa15.13■□□□□ 0.01
COL3A1-203ENST00000450867 CCL26Q9Y258 94 aa15.13■□□□□ 0.01
COL3A1-203ENST00000450867 A0A1W2PQC6 194 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 M0QYV0 167 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 EPHB6O15197 1021 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 CHADO15335 359 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 CYP26A1O43174 497 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 GABBR2O75899 941 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 CKMP06732 381 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 HDCP19113 662 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 PGFP49763 221 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 BPIFB4P59827 614 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 ZNF445P59923 1031 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 GPC5P78333 572 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 PFKPQ01813 784 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 PTK2Q05397 1052 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 IFRD2Q12894 506 aaPredicted RBP15.12■□□□□ 0.01
COL3A1-203ENST00000450867 ZNF77Q15935 545 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 ARHGAP29Q52LW3 1261 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 PMF1Q6P1K2 205 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 KLHDC10Q6PID8 442 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 BHLHA9Q7RTU4 235 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 SCD5Q86SK9 330 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 ARL14EPQ8N8R7 260 aaPredicted RBP15.12■□□□□ 0.01
COL3A1-203ENST00000450867 ST13P5Q8NFI4 369 aaPredicted RBP15.12■□□□□ 0.01
COL3A1-203ENST00000450867 UBA3Q8TBC4 463 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 BPIFB1Q8TDL5 484 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 SECISBP2LQ93073 1101 aaKnown RBP15.12■□□□□ 0.01
COL3A1-203ENST00000450867 CYP2S1Q96SQ9 504 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 RNF38Q9H0F5 515 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 TRPC7Q9HCX4 862 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 ACP6Q9NPH0 428 aa15.12■□□□□ 0.01
COL3A1-203ENST00000450867 FAM207AQ9NSI2 230 aaPredicted RBP15.12■□□□□ 0.01
COL3A1-203ENST00000450867 CHORDC1Q9UHD1 332 aaPredicted RBP15.12■□□□□ 0.01
COL3A1-203ENST00000450867 TMEM221A6NGB7 291 aa15.11■□□□□ 0.01
COL3A1-203ENST00000450867 M0R296 226 aa15.11■□□□□ 0.01
COL3A1-203ENST00000450867 DPYSL4O14531 572 aa15.11■□□□□ 0.01
COL3A1-203ENST00000450867 TEX33O43247 280 aa15.11■□□□□ 0.01
COL3A1-203ENST00000450867 THAP12O43422 761 aa15.11■□□□□ 0.01
COL3A1-203ENST00000450867 ZBED1O96006 694 aa15.11■□□□□ 0.01
COL3A1-203ENST00000450867 USP8P40818 1118 aa15.11■□□□□ 0.01
COL3A1-203ENST00000450867 TKTL1P51854 596 aa15.11■□□□□ 0.01
COL3A1-203ENST00000450867 MLLT6P55198 1093 aaPredicted RBP15.11■□□□□ 0.01
COL3A1-203ENST00000450867 TPM4P67936 248 aa15.11■□□□□ 0.01
COL3A1-203ENST00000450867 PLCB2Q00722 1185 aa15.11■□□□□ 0.01
COL3A1-203ENST00000450867 RAPGEF1Q13905 1077 aa15.11■□□□□ 0.01
COL3A1-203ENST00000450867 NR1I3Q14994 352 aa15.11■□□□□ 0.01
COL3A1-203ENST00000450867 HECTD3Q5T447 861 aa15.11■□□□□ 0.01
COL3A1-203ENST00000450867 ARHGAP18Q8N392 663 aa15.11■□□□□ 0.01
COL3A1-203ENST00000450867 NEK11Q8NG66 645 aa15.11■□□□□ 0.01
COL3A1-203ENST00000450867 RIN3Q8TB24 985 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms