RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 TRPM5Q9NZQ8 1165 aa10.83□□□□□ -0.68
LINC01004-202ENST00000450686 ANGPTL2Q9UKU9 493 aa10.83□□□□□ -0.68
LINC01004-202ENST00000450686 CDH9Q9ULB4 789 aa10.83□□□□□ -0.68
LINC01004-202ENST00000450686 DMXL2Q8TDJ6 3036 aa10.83□□□□□ -0.68
LINC01004-202ENST00000450686 NBEAQ8NFP9 2946 aa10.83□□□□□ -0.68
LINC01004-202ENST00000450686 PKD1L2Q7Z442 2459 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 FAM208BQ5VWN6 2430 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 ZNF840PA6NDX5 716 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 C1QTNF9BB2RNN3 333 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 SGK1O00141 431 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 TRIM24O15164 1050 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 TGFB1I1O43294 461 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 AKAP3O75969 853 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 CLSTN1O94985 981 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 NFATC1O95644 943 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 C1QTNF9P0C862 333 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 IRF1P10914 325 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 MBL2P11226 248 aaPredicted RBP10.82□□□□□ -0.68
LINC01004-202ENST00000450686 TNNI1P19237 187 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 ANXA13P27216 316 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 GNL1P36915 607 aaPredicted RBP10.82□□□□□ -0.68
LINC01004-202ENST00000450686 PGFP49763 221 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 NOVA1P51513 510 aaKnown RBP10.82□□□□□ -0.68
LINC01004-202ENST00000450686 CDH8P55286 799 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 MYL6P60660 151 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 AMPD2Q01433 879 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 FOXC1Q12948 553 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 STK38Q15208 465 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 DHCR24Q15392 516 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 SNRNP35Q16560 246 aaKnown RBP10.82□□□□□ -0.68
LINC01004-202ENST00000450686 DUOXA2Q1HG44 320 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 PROX2Q3B8N5 592 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 UAP1L1Q3KQV9 507 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 FBXO43Q4G163 708 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 PMS2CLQ68D20 193 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 GRAMD1CQ8IYS0 662 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 NAT16Q8N8M0 369 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 FSIP1Q8NA03 581 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 SCAMP5Q8TAC9 235 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 MYCBPAPQ8TBZ2 947 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 PLEKHO2Q8TD55 490 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 PIGKQ92643 395 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 ACDQ96AP0 544 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 SPATA17Q96L03 361 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 TRIM9Q9C026 710 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 SNX25Q9H3E2 840 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.82□□□□□ -0.68
LINC01004-202ENST00000450686 AGPAT3Q9NRZ7 376 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 NXF1Q9UBU9 619 aaKnown RBP10.82□□□□□ -0.68
LINC01004-202ENST00000450686 EBF1Q9UH73 591 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 R3HCC1Q9Y3T6 440 aaKnown RBP10.82□□□□□ -0.68
LINC01004-202ENST00000450686 PCDHGA5Q9Y5G8 931 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 CEP192Q8TEP8 1941 aa10.82□□□□□ -0.68
LINC01004-202ENST00000450686 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 BHMG1C9JSJ3 638 aaPredicted RBP10.81□□□□□ -0.68
LINC01004-202ENST00000450686 RHOBTB1O94844 696 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 OAS1P00973 400 aaKnown RBP10.81□□□□□ -0.68
LINC01004-202ENST00000450686 PTPN1P18031 435 aaKnown RBP10.81□□□□□ -0.68
LINC01004-202ENST00000450686 WASP42768 502 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 IRX4P78413 519 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 CYP24A1Q07973 514 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 ZNF252P-AS1Q0IIN9 211 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 NR1H3Q13133 447 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 ALCAMQ13740 583 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 WDR72Q3MJ13 1102 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 LY6G5CQ5SRR4 150 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 SH3PXD2AQ5TCZ1 1133 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 KIAA1211LQ6NV74 962 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 RHBDF2Q6PJF5 856 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 VSTM1Q6UX27 236 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 EPM2AIP1Q7L775 607 aaPredicted RBP10.81□□□□□ -0.68
LINC01004-202ENST00000450686 CYP2U1Q7Z449 544 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 WDR49Q8IV35 697 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 TMEFF1Q8IYR6 380 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 IL17RCQ8NAC3 791 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 SCFD1Q8WVM8 642 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 FNBP1Q96RU3 617 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 KCNK16Q96T55 309 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 CGRRF1Q99675 332 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 TTLL2Q9BWV7 592 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 SDCBP2Q9H190 292 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 CCSER2Q9H7U1 834 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 CHORDC1Q9UHD1 332 aaPredicted RBP10.81□□□□□ -0.68
LINC01004-202ENST00000450686 MBD1Q9UIS9 605 aaPredicted RBP10.81□□□□□ -0.68
LINC01004-202ENST00000450686 MMP17Q9ULZ9 603 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 FREM2Q5SZK8 3169 aa10.81□□□□□ -0.68
LINC01004-202ENST00000450686 LAMA5O15230 3695 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 ITPR1Q14643 2758 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 SOBPA7XYQ1 873 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 A8MXQ7 604 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 TRIM66O15016 1216 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 COCHO43405 550 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 FOXD2O60548 495 aaPredicted RBP10.8□□□□□ -0.68
LINC01004-202ENST00000450686 ADAM23O75077 832 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 KAT7O95251 611 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 CCDC130P13994 396 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 PDCP20941 246 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 PTGER3P43115 390 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 MAPK8P45983 427 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 NASPP49321 788 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms