RNA–Protein interactions for RNA: ENST00000450584.5

LDHB-204, Transcript of lactate dehydrogenase B, human

TSL 3

Gene LDHB, Length 732 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHB-204	ENST00000450584	IPO4	Q8TEX9	1081 aa	Known RBP	10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	SLC20A1	Q8WUM9	679 aa		10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	BCL7C	Q8WUZ0	217 aa	Predicted RBP	10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	DDX1	Q92499	740 aa	Known RBP	10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	KAT5	Q92993	513 aa		10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	VCPIP1	Q96JH7	1222 aa		10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	PBK	Q96KB5	322 aa		10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	ISCU	Q9H1K1	167 aa		10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	SNX25	Q9H3E2	840 aa		10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	CDHR5	Q9HBB8	845 aa		10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	CNTN3	Q9P232	1028 aa		10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	HESX1	Q9UBX0	185 aa		10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	CNOT8	Q9UFF9	292 aa	Known RBP	10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	GTF3C4	Q9UKN8	822 aa		10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	SNX12	Q9UMY4	172 aa		10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	ST3GAL5	Q9UNP4	418 aa		10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	NOC2L	Q9Y3T9	749 aa	Known RBP	10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	NUB1	Q9Y5A7	615 aa		10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	NUMBL	Q9Y6R0	609 aa		10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	DOCK6	Q96HP0	2047 aa		10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	ADAMTS20	P59510	1910 aa		10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	NCAN	O14594	1321 aa		10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	PTPRJ	Q12913	1337 aa		10.32	□□□□□ -0.76
LDHB-204	ENST00000450584	GOLGA6L10	A0A0M3HER8	536 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	FAM170B	A6NMN3	283 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	MIF4GD	A9UHW6	222 aa	Known RBP	10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	ANHX	E9PGG2	379 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	HUS1	O60921	280 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	LRP3	O75074	770 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	ERLIN1	O75477	346 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	KCNK5	O95279	499 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	CST3	P01034	146 aa	Predicted RBP	10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	ATP1A1	P05023	1023 aa	Known RBP	10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	PAX3	P23760	479 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	TAF6	P49848	677 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	FAM189B	P81408	668 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	ZNF394	Q53GI3	561 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	SGO2	Q562F6	1265 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	SEL1L2	Q5TEA6	688 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	PAPD7	Q5XG87	772 aa	Known RBP	10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	IL31	Q6EBC2	164 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	VPS52	Q8N1B4	723 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	C1orf127	Q8N9H9	656 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	ZNF564	Q8TBZ8	553 aa	Predicted RBP	10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	ZCCHC14	Q8WYQ9	949 aa	Known RBP	10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	CAPZA3	Q96KX2	299 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	HEXIM2	Q96MH2	286 aa	Known RBP	10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	BBC3	Q96PG8	261 aa	Predicted RBP	10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	VN1R3	Q9BXE9	311 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	NT5C1A	Q9BXI3	368 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	EIF2A	Q9BY44	585 aa	Known RBP	10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	THAP2	Q9H0W7	228 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	NXF3	Q9H4D5	531 aa	Known RBP	10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	VRTN	Q9H8Y1	702 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	FAM105A	Q9NUU6	356 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	TMEM161A	Q9NX61	479 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	ADAM22	Q9P0K1	906 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	NOCT	Q9UK39	431 aa	Known RBP	10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	TFR2	Q9UP52	801 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	GIT1	Q9Y2X7	761 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	IPP	Q9Y573	584 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	IRAK3	Q9Y616	596 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	CAPN6	Q9Y6Q1	641 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	DUSP10	Q9Y6W6	482 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	CLUH	O75153	1309 aa		10.31	□□□□□ -0.76
LDHB-204	ENST00000450584	MYH10	P35580	1976 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	GRID2IP	A4D2P6	1211 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	RCCD1	A6NED2	376 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	SHISA7	A6NL88	538 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	MYO1F	O00160	1098 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	CES2	O00748	559 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	TH	P07101	528 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	CTSA	P10619	480 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	VDR	P11473	427 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	AKAP5	P24588	427 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	TARS	P26639	723 aa	Known RBP	10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	HOXA11	P31270	313 aa	Predicted RBP	10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	DNA2	P51530	1060 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	CLCN4	P51793	760 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	FMO1	Q01740	532 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	SRSF5	Q13243	272 aa	Known RBP	10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	FZD5	Q13467	585 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	SF3A2	Q15428	464 aa	Known RBP	10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	CLLU1OS	Q5K130	101 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	ZFYVE27	Q5T4F4	411 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	NAA35	Q5VZE5	725 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	C11orf63	Q6NUN7	778 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	DCUN1D2	Q6PH85	259 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	PRR23B	Q6ZRT6	265 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	DPH6	Q7L8W6	267 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	FAM228A	Q86W67	206 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	ERICH1	Q86X53	443 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	METTL23	Q86XA0	190 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	LRRC43	Q8N309	656 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	RNF169	Q8NCN4	708 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	APPL2	Q8NEU8	664 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	OR6B3	Q8NGW1	331 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	TPCN2	Q8NHX9	752 aa		10.3	□□□□□ -0.76
LDHB-204	ENST00000450584	URGCP	Q8TCY9	931 aa		10.3	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms