RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 LHFPL3Q86UP9 236 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 ARMC8Q8IUR7 673 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 COLGALT2Q8IYK4 626 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 HACE1Q8IYU2 909 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 IQCKQ8N0W5 287 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 LRRC17Q8N6Y2 441 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 KCNH5Q8NCM2 988 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 KCTD4Q8WVF5 259 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 FCGR1BQ92637 280 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 ZNF75CPQ92670 426 aaPredicted RBP2.28□□□□□ -2.04
USP53-202ENST00000450251 RORBQ92753 470 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.28□□□□□ -2.04
USP53-202ENST00000450251 DCUN1D1Q96GG9 259 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 VCPIP1Q96JH7 1222 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 RBBP8Q99708 897 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 OSBPL7Q9BZF2 842 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 C1orf21Q9H246 121 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 SYNDIG1Q9H7V2 258 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 MKNK2Q9HBH9 465 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 NCOA5Q9HCD5 579 aaKnown RBP2.28□□□□□ -2.04
USP53-202ENST00000450251 EPB41L4AQ9HCS5 686 aaPredicted RBP2.28□□□□□ -2.04
USP53-202ENST00000450251 CD320Q9NPF0 282 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 TNFRSF10DQ9UBN6 386 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 MLXQ9UH92 298 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 LGALS13Q9UHV8 139 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 MAFFQ9ULX9 164 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 HPSEQ9Y251 543 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 IFT52Q9Y366 437 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 AP4B1Q9Y6B7 739 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 SLC4A4Q9Y6R1 1079 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 MYOM1P52179 1685 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 PHRF1Q9P1Y6 1649 aaKnown RBP2.28□□□□□ -2.04
USP53-202ENST00000450251 CLRN2A0PK11 232 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 WRBO00258 174 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 DNM1LO00429 736 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 YKT6O15498 198 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 CFLARO15519 480 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 NCK2O43639 380 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 PEX11AO75192 247 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 KRT36O76013 467 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 CIAO1O76071 339 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 RHOBTB3O94955 611 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 ZBTB11O95625 1053 aaPredicted RBP2.28□□□□□ -2.04
USP53-202ENST00000450251 IFNA14P01570 189 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 DDX5P17844 614 aaKnown RBP2.28□□□□□ -2.04
USP53-202ENST00000450251 FASP25445 335 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 POU1F1P28069 291 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 ADCY7P51828 1080 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 ACLYP53396 1101 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 RAD23AP54725 363 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 TMBIM6P55061 237 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 SSTP61278 116 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 ZNF200P98182 395 aaPredicted RBP2.28□□□□□ -2.04
USP53-202ENST00000450251 GFPT1Q06210 699 aaPredicted RBP2.28□□□□□ -2.04
USP53-202ENST00000450251 SLC29A2Q14542 456 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 EMC2Q15006 297 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 ZNF827Q17R98 1081 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 LONRF1Q17RB8 773 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 CTC1Q2NKJ3 1217 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 TRIM71Q2Q1W2 868 aaKnown RBP2.28□□□□□ -2.04
USP53-202ENST00000450251 EAPPQ56P03 285 aaPredicted RBP2.28□□□□□ -2.04
USP53-202ENST00000450251 FAM47AQ5JRC9 791 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 PDZK1Q5T2W1 519 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 TTC23Q5W5X9 447 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 STYK1Q6J9G0 422 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 DCUN1D2Q6PH85 259 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 RIPOR1Q6ZS17 1223 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 CAPN12Q6ZSI9 719 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 POLNQ7Z5Q5 900 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 CAND1Q86VP6 1230 aaKnown RBP2.28□□□□□ -2.04
USP53-202ENST00000450251 MMAAQ8IVH4 418 aaKnown RBP2.28□□□□□ -2.04
USP53-202ENST00000450251 DENND6AQ8IWF6 608 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 CENPSQ8N2Z9 138 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 FBXL16Q8N461 479 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 KYQ8NBH2 561 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 XXYLT1Q8NBI6 393 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 TSEN2Q8NCE0 465 aaKnown RBP2.28□□□□□ -2.04
USP53-202ENST00000450251 UHMK1Q8TAS1 419 aaKnown RBP2.28□□□□□ -2.04
USP53-202ENST00000450251 MCOLN3Q8TDD5 553 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 FAM172AQ8WUF8 416 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 LARP4BQ92615 738 aaKnown RBP2.28□□□□□ -2.04
USP53-202ENST00000450251 ANKS1AQ92625 1134 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 C18orf8Q96DM3 657 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 CCDC126Q96EE4 140 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 WNK4Q96J92 1243 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 CNDP1Q96KN2 507 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 CDRT15Q96T59 188 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 MYD88Q99836 296 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 GAL3ST1Q99999 423 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 NUDT12Q9BQG2 462 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 BDH2Q9BUT1 245 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 PLEKHA5Q9HAU0 1116 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 KIAA1586Q9HCI6 787 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 PNPLA8Q9NP80 782 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 AASDHPPTQ9NRN7 309 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 C1orf112Q9NSG2 853 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 COMMD8Q9NX08 183 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 GCNT4Q9P109 453 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 FETUBQ9UGM5 382 aa2.28□□□□□ -2.04
USP53-202ENST00000450251 IP6K2Q9UHH9 426 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms