RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 SPATA20Q8TB22 786 aa16.17■□□□□ 0.18
CHD3-205ENST00000449744 CHFRQ96EP1 664 aa16.17■□□□□ 0.18
CHD3-205ENST00000449744 CYFIP2Q96F07 1278 aa16.17■□□□□ 0.18
CHD3-205ENST00000449744 TWNKQ96RR1 684 aa16.17■□□□□ 0.18
CHD3-205ENST00000449744 HNRNPABQ99729 332 aaKnown RBP16.17■□□□□ 0.18
CHD3-205ENST00000449744 SMOQ99835 787 aa16.17■□□□□ 0.18
CHD3-205ENST00000449744 NACA2Q9H009 215 aa16.17■□□□□ 0.18
CHD3-205ENST00000449744 FBXO44Q9H4M3 255 aa16.17■□□□□ 0.18
CHD3-205ENST00000449744 CSNK1G1Q9HCP0 422 aa16.17■□□□□ 0.18
CHD3-205ENST00000449744 RAB20Q9NX57 234 aa16.17■□□□□ 0.18
CHD3-205ENST00000449744 CFAP97Q9P2B7 532 aa16.17■□□□□ 0.18
CHD3-205ENST00000449744 HELZP42694 1942 aaKnown RBP16.17■□□□□ 0.18
CHD3-205ENST00000449744 EP300Q09472 2414 aaPredicted RBP16.16■□□□□ 0.18
CHD3-205ENST00000449744 CHURC1-FNTBB4DL54 471 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 K7ESF4 209 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 PSMA7O14818 248 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 COCHO43405 550 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 RNF40O75150 1001 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 CILPO75339 1184 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 BEST1O76090 585 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 PPP1R2P41236 205 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 ID4P47928 161 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 FNTBP49356 437 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 LRRC63Q05C16 580 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 HEATR6Q6AI08 1181 aaKnown RBP16.16■□□□□ 0.18
CHD3-205ENST00000449744 ANKRD40Q6AI12 368 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 ISM2Q6H9L7 571 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 FILIP1Q7Z7B0 1213 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 KIAA2013Q8IYS2 634 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 DCLK2Q8N568 766 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 TTC39CQ8N584 583 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 JAKMIP2Q96AA8 810 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 FAXDC2Q96IV6 333 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 FBRSL1Q9HCM7 1045 aaKnown RBP16.16■□□□□ 0.18
CHD3-205ENST00000449744 IL37Q9NZH6 218 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 GMIPQ9P107 970 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 GMEB2Q9UKD1 530 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 SLC8A2Q9UPR5 921 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 SH3BP1Q9Y3L3 701 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 GVINP1Q7Z2Y8 2422 aa16.16■□□□□ 0.18
CHD3-205ENST00000449744 FAM92AA1XBS5 289 aa16.15■□□□□ 0.18
CHD3-205ENST00000449744 CNR2P34972 360 aa16.15■□□□□ 0.18
CHD3-205ENST00000449744 TUBP50607 506 aa16.15■□□□□ 0.18
CHD3-205ENST00000449744 PMS1P54277 932 aaKnown RBP16.15■□□□□ 0.18
CHD3-205ENST00000449744 MCCD1P59942 119 aaPredicted RBP16.15■□□□□ 0.18
CHD3-205ENST00000449744 ZNF394Q53GI3 561 aa16.15■□□□□ 0.18
CHD3-205ENST00000449744 SNX30Q5VWJ9 437 aa16.15■□□□□ 0.18
CHD3-205ENST00000449744 NAIF1Q69YI7 327 aaPredicted RBP16.15■□□□□ 0.18
CHD3-205ENST00000449744 PRR23BQ6ZRT6 265 aa16.15■□□□□ 0.18
CHD3-205ENST00000449744 ELOA2Q8IYF1 753 aaPredicted RBP16.15■□□□□ 0.18
CHD3-205ENST00000449744 CCDC26Q8TAB7 109 aa16.15■□□□□ 0.18
CHD3-205ENST00000449744 SEMA4DQ92854 862 aa16.15■□□□□ 0.18
CHD3-205ENST00000449744 CCSER2Q9H7U1 834 aa16.15■□□□□ 0.18
CHD3-205ENST00000449744 TLR8Q9NR97 1041 aaKnown RBP16.15■□□□□ 0.18
CHD3-205ENST00000449744 TBC1D14Q9P2M4 693 aa16.15■□□□□ 0.18
CHD3-205ENST00000449744 ARMCX3Q9UH62 379 aaPredicted RBP16.15■□□□□ 0.18
CHD3-205ENST00000449744 TRIM49BA6NDI0 452 aa16.14■□□□□ 0.17
CHD3-205ENST00000449744 SCAMP3O14828 347 aaKnown RBP16.14■□□□□ 0.17
CHD3-205ENST00000449744 ZDHHC11BP0C7U3 371 aa16.14■□□□□ 0.17
CHD3-205ENST00000449744 HOXA6P31267 233 aa16.14■□□□□ 0.17
CHD3-205ENST00000449744 DMWDQ09019 674 aa16.14■□□□□ 0.17
CHD3-205ENST00000449744 SIM2Q14190 667 aaPredicted RBP16.14■□□□□ 0.17
CHD3-205ENST00000449744 PKN3Q6P5Z2 889 aa16.14■□□□□ 0.17
CHD3-205ENST00000449744 CLEC20AQ6ZU45 233 aa16.14■□□□□ 0.17
CHD3-205ENST00000449744 ZC3H3Q8IXZ2 948 aaKnown RBP16.14■□□□□ 0.17
CHD3-205ENST00000449744 ADGRG2Q8IZP9 1017 aa16.14■□□□□ 0.17
CHD3-205ENST00000449744 GPR161Q8N6U8 529 aaKnown RBP16.14■□□□□ 0.17
CHD3-205ENST00000449744 WHAMMQ8TF30 809 aa16.14■□□□□ 0.17
CHD3-205ENST00000449744 DHTKD1Q96HY7 919 aaPredicted RBP16.14■□□□□ 0.17
CHD3-205ENST00000449744 HEXIM2Q96MH2 286 aaKnown RBP16.14■□□□□ 0.17
CHD3-205ENST00000449744 METTL14Q9HCE5 456 aaKnown RBP16.14■□□□□ 0.17
CHD3-205ENST00000449744 CISHQ9NSE2 258 aa16.14■□□□□ 0.17
CHD3-205ENST00000449744 C2orf42Q9NWW7 574 aa16.14■□□□□ 0.17
CHD3-205ENST00000449744 MAN1B1Q9UKM7 699 aa16.14■□□□□ 0.17
CHD3-205ENST00000449744 MYH10P35580 1976 aa16.14■□□□□ 0.17
CHD3-205ENST00000449744 E2F8A0AVK6 867 aa16.13■□□□□ 0.17
CHD3-205ENST00000449744 ADH1CP00326 375 aa16.13■□□□□ 0.17
CHD3-205ENST00000449744 CYP17A1P05093 508 aa16.13■□□□□ 0.17
CHD3-205ENST00000449744 ACO1P21399 889 aaKnown RBP16.13■□□□□ 0.17
CHD3-205ENST00000449744 DHCR24Q15392 516 aa16.13■□□□□ 0.17
CHD3-205ENST00000449744 LPAL2Q16609 132 aa16.13■□□□□ 0.17
CHD3-205ENST00000449744 CBWD6Q4V339 395 aa16.13■□□□□ 0.17
CHD3-205ENST00000449744 CBWD3Q5JTY5 395 aa16.13■□□□□ 0.17
CHD3-205ENST00000449744 CBWD5Q5RIA9 395 aa16.13■□□□□ 0.17
CHD3-205ENST00000449744 KLHL10Q6JEL2 608 aa16.13■□□□□ 0.17
CHD3-205ENST00000449744 CEP68Q76N32 757 aa16.13■□□□□ 0.17
CHD3-205ENST00000449744 ERMP1Q7Z2K6 904 aa16.13■□□□□ 0.17
CHD3-205ENST00000449744 WDR5BQ86VZ2 330 aa16.13■□□□□ 0.17
CHD3-205ENST00000449744 RPLP0P6Q8NHW5 317 aa16.13■□□□□ 0.17
CHD3-205ENST00000449744 ACDQ96AP0 544 aa16.13■□□□□ 0.17
CHD3-205ENST00000449744 TMEM176AQ96HP8 235 aa16.13■□□□□ 0.17
CHD3-205ENST00000449744 PNPLA8Q9NP80 782 aa16.13■□□□□ 0.17
CHD3-205ENST00000449744 CIZ1Q9ULV3 898 aaPredicted RBP16.13■□□□□ 0.17
CHD3-205ENST00000449744 SCML2Q9UQR0 700 aa16.13■□□□□ 0.17
CHD3-205ENST00000449744 HRO43593 1189 aa16.12■□□□□ 0.17
CHD3-205ENST00000449744 TLR5O60602 858 aa16.12■□□□□ 0.17
CHD3-205ENST00000449744 IRF1P10914 325 aa16.12■□□□□ 0.17
CHD3-205ENST00000449744 ATP5C1P36542 298 aaKnown RBP16.12■□□□□ 0.17
CHD3-205ENST00000449744 OPRD1P41143 372 aa16.12■□□□□ 0.17
CHD3-205ENST00000449744 YWHAEP62258 255 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms